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Items: 41

1.

Polyphasic characterization of four soil-derived phenanthrene-degrading Acidovorax strains and proposal of Acidovorax carolinensis sp. nov.

Singleton DR, Lee J, Dickey AN, Stroud A, Scholl EH, Wright FA, Aitken MD.

Syst Appl Microbiol. 2018 Sep;41(5):460-472. doi: 10.1016/j.syapm.2018.06.001. Epub 2018 Jun 8.

2.

Erratum: Rugosibacter aromaticivorans gen. nov., sp. nov., a bacterium within the family Rhodocyclaceae, isolated from contaminated soil, capable of degrading aromatic compounds.

Corteselli EM, Aitken MD, Singleton DR.

Int J Syst Evol Microbiol. 2017 Nov;67(11):4879. doi: 10.1099/ijsem.0.002409. No abstract available.

3.

Nontarget Analysis Reveals a Bacterial Metabolite of Pyrene Implicated in the Genotoxicity of Contaminated Soil after Bioremediation.

Tian Z, Gold A, Nakamura J, Zhang Z, Vila J, Singleton DR, Collins LB, Aitken MD.

Environ Sci Technol. 2017 Jun 20;51(12):7091-7100. doi: 10.1021/acs.est.7b01172. Epub 2017 May 30.

5.

Rugosibacter aromaticivorans gen. nov., sp. nov., a bacterium within the family Rhodocyclaceae, isolated from contaminated soil, capable of degrading aromatic compounds.

Corteselli EM, Aitken MD, Singleton DR.

Int J Syst Evol Microbiol. 2017 Feb;67(2):311-318. doi: 10.1099/ijsem.0.001622. Epub 2017 Mar 16. Erratum in: Int J Syst Evol Microbiol. 2017 Nov;67(11):4879.

6.

Complete Genome Sequence of a Bacterium Representing a Deep Uncultivated Lineage within the Gammaproteobacteria Associated with the Degradation of Polycyclic Aromatic Hydrocarbons.

Singleton DR, Dickey AN, Scholl EH, Wright FA, Aitken MD.

Genome Announc. 2016 Oct 6;4(5). pii: e01086-16. doi: 10.1128/genomeA.01086-16.

7.

Surfactant-induced bacterial community changes correlated with increased polycyclic aromatic hydrocarbon degradation in contaminated soil.

Singleton DR, Adrion AC, Aitken MD.

Appl Microbiol Biotechnol. 2016 Dec;100(23):10165-10177. Epub 2016 Oct 1.

8.
9.

Remembering Our Forebears: Albert Jan Kluyver and the Unity of Life.

Singleton R Jr, Singleton DR.

J Hist Biol. 2017 Feb;50(1):169-218. doi: 10.1007/s10739-016-9438-7.

PMID:
26869464
10.

Complete Genome Sequence of a Novel Bacterium within the Family Rhodocyclaceae That Degrades Polycyclic Aromatic Hydrocarbons.

Singleton DR, Dickey AN, Scholl EH, Wright FA, Aitken MD.

Genome Announc. 2015 Apr 9;3(2). pii: e00251-15. doi: 10.1128/genomeA.00251-15.

11.
12.

Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP.

Gutierrez T, Singleton DR, Berry D, Yang T, Aitken MD, Teske A.

ISME J. 2013 Nov;7(11):2091-104. doi: 10.1038/ismej.2013.98. Epub 2013 Jun 20.

13.

Pyrosequence analyses of bacterial communities during simulated in situ bioremediation of polycyclic aromatic hydrocarbon-contaminated soil.

Singleton DR, Jones MD, Richardson SD, Aitken MD.

Appl Microbiol Biotechnol. 2013 Sep;97(18):8381-91. doi: 10.1007/s00253-012-4531-0. Epub 2012 Nov 7.

14.

Heterologous expression of polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenase genes from a novel pyrene-degrading betaproteobacterium.

Singleton DR, Hu J, Aitken MD.

Appl Environ Microbiol. 2012 May;78(10):3552-9. doi: 10.1128/AEM.00173-12. Epub 2012 Mar 16.

15.

Long-term simulation of in situ biostimulation of polycyclic aromatic hydrocarbon-contaminated soil.

Richardson SD, Jones MD, Singleton DR, Aitken MD.

Biodegradation. 2012 Jul;23(4):621-33. doi: 10.1007/s10532-012-9538-9. Epub 2012 Feb 5.

16.

Stable isotope probing of an algal bloom to identify uncultivated members of the Rhodobacteraceae associated with low-molecular-weight polycyclic aromatic hydrocarbon degradation.

Gutierrez T, Singleton DR, Aitken MD, Semple KT.

Appl Environ Microbiol. 2011 Nov;77(21):7856-60. doi: 10.1128/AEM.06200-11. Epub 2011 Sep 16.

17.

Stable-isotope probing of the polycyclic aromatic hydrocarbon-degrading bacterial guild in a contaminated soil.

Jones MD, Crandell DW, Singleton DR, Aitken MD.

Environ Microbiol. 2011 Oct;13(10):2623-32. doi: 10.1111/j.1462-2920.2011.02501.x. Epub 2011 May 12.

18.

Multiple DNA extractions coupled with stable-isotope probing of anthracene-degrading bacteria in contaminated soil.

Jones MD, Singleton DR, Sun W, Aitken MD.

Appl Environ Microbiol. 2011 May;77(9):2984-91. doi: 10.1128/AEM.01942-10. Epub 2011 Mar 11.

19.

Pyrosequence analysis of bacterial communities in aerobic bioreactors treating polycyclic aromatic hydrocarbon-contaminated soil.

Singleton DR, Richardson SD, Aitken MD.

Biodegradation. 2011 Nov;22(6):1061-73. doi: 10.1007/s10532-011-9463-3. Epub 2011 Mar 3.

20.

A mechanistic model of developing immunity to Teladorsagia circumcincta infection in lambs.

Singleton DR, Stear MJ, Matthews L.

Parasitology. 2011 Mar;138(3):322-32. doi: 10.1017/S0031182010001289. Epub 2010 Oct 15.

PMID:
20946694
21.
22.

Characterization of a polycyclic aromatic hydrocarbon degradation gene cluster in a phenanthrene-degrading Acidovorax strain.

Singleton DR, Ramirez LG, Aitken MD.

Appl Environ Microbiol. 2009 May;75(9):2613-20. doi: 10.1128/AEM.01955-08. Epub 2009 Mar 6.

23.
24.

Effect of incubation conditions on the enrichment of pyrene-degrading bacteria identified by stable-isotope probing in an aged, PAH-contaminated soil.

Jones MD, Singleton DR, Carstensen DP, Powell SN, Swanson JS, Pfaender FK, Aitken MD.

Microb Ecol. 2008 Aug;56(2):341-9. doi: 10.1007/s00248-007-9352-9. Epub 2007 Dec 29.

PMID:
18165874
25.

Effects of enrichment with phthalate on polycyclic aromatic hydrocarbon biodegradation in contaminated soil.

Singleton DR, Richardson SD, Aitken MD.

Biodegradation. 2008 Jul;19(4):577-87. Epub 2007 Nov 8.

PMID:
17990065
27.

Inactivation of Escherichia coli O157:H7 during thermophilic anaerobic digestion of manure from dairy cattle.

Aitken MD, Sobsey MD, Van Abel NA, Blauth KE, Singleton DR, Crunk PL, Nichols C, Walters GW, Schneider M.

Water Res. 2007 Apr;41(8):1659-66. Epub 2007 Mar 13.

PMID:
17353028
28.

Stable-isotope probing with multiple growth substrates to determine substrate specificity of uncultivated bacteria.

Singleton DR, Hunt M, Powell SN, Frontera-Suau R, Aitken MD.

J Microbiol Methods. 2007 Apr;69(1):180-7. Epub 2006 Dec 30.

PMID:
17267058
29.

Identification and quantification of uncultivated Proteobacteria associated with pyrene degradation in a bioreactor treating PAH-contaminated soil.

Singleton DR, Sangaiah R, Gold A, Ball LM, Aitken MD.

Environ Microbiol. 2006 Oct;8(10):1736-45.

PMID:
16958754
30.

Surface hydrophobicity changes of two Candida albicans serotype B mnn4delta mutants.

Singleton DR, Masuoka J, Hazen KC.

Eukaryot Cell. 2005 Apr;4(4):639-48.

31.

Contribution of cell surface hydrophobicity protein 1 (Csh1p) to virulence of hydrophobic Candida albicans serotype A cells.

Singleton DR, Fidel PL Jr, Wozniak KL, Hazen KC.

FEMS Microbiol Lett. 2005 Mar 15;244(2):373-7.

32.

Stable-isotope probing of bacteria capable of degrading salicylate, naphthalene, or phenanthrene in a bioreactor treating contaminated soil.

Singleton DR, Powell SN, Sangaiah R, Gold A, Ball LM, Aitken MD.

Appl Environ Microbiol. 2005 Mar;71(3):1202-9.

33.
34.

Solirubrobacter pauli gen. nov., sp. nov., a mesophilic bacterium within the Rubrobacteridae related to common soil clones.

Singleton DR, Furlong MA, Peacock AD, White DC, Coleman DC, Whitman WB.

Int J Syst Evol Microbiol. 2003 Mar;53(Pt 2):485-90.

PMID:
12710617
35.
36.

Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples.

Singleton DR, Furlong MA, Rathbun SL, Whitman WB.

Appl Environ Microbiol. 2001 Sep;67(9):4374-6.

37.

Cloning and analysis of a Candida albicans gene that affects cell surface hydrophobicity.

Singleton DR, Masuoka J, Hazen KC.

J Bacteriol. 2001 Jun;183(12):3582-8.

39.

A yeast protein that bidirectionally affects nucleocytoplasmic transport.

Singleton DR, Chen S, Hitomi M, Kumagai C, Tartakoff AM.

J Cell Sci. 1995 Jan;108 ( Pt 1):265-72.

40.

Derivation and characterization of glycoinositol-phospholipid anchor-defective human K562 cell clones.

Hirose S, Mohney RP, Mutka SC, Ravi L, Singleton DR, Perry G, Tartakoff AM, Medof ME.

J Biol Chem. 1992 Mar 15;267(8):5272-8.

41.

Improved Assay for Rhodanese in Thiobacillus spp.

Singleton DR, Smith DW.

Appl Environ Microbiol. 1988 Nov;54(11):2866-7.

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