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Items: 1 to 50 of 91


The Impact of Portal Satisfaction on Portal Use and Health-Seeking Behavior: Structural Equation Analysis.

Silver RA, Subramaniam C, Stylianou A.

J Med Internet Res. 2020 Mar 27;22(3):e16260. doi: 10.2196/16260.


Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits.

Gleeson P, Cantarelli M, Marin B, Quintana A, Earnshaw M, Sadeh S, Piasini E, Birgiolas J, Cannon RC, Cayco-Gajic NA, Crook S, Davison AP, Dura-Bernal S, Ecker A, Hines ML, Idili G, Lanore F, Larson SD, Lytton WW, Majumdar A, McDougal RA, Sivagnanam S, Solinas S, Stanislovas R, van Albada SJ, van Geit W, Silver RA.

Neuron. 2019 Aug 7;103(3):395-411.e5. doi: 10.1016/j.neuron.2019.05.019. Epub 2019 Jun 11.


Re-evaluating Circuit Mechanisms Underlying Pattern Separation.

Cayco-Gajic NA, Silver RA.

Neuron. 2019 Feb 20;101(4):584-602. doi: 10.1016/j.neuron.2019.01.044. Review.


Geppetto: a reusable modular open platform for exploring neuroscience data and models.

Cantarelli M, Marin B, Quintana A, Earnshaw M, Court R, Gleeson P, Dura-Bernal S, Silver RA, Idili G.

Philos Trans R Soc Lond B Biol Sci. 2018 Sep 10;373(1758). pii: 20170380. doi: 10.1098/rstb.2017.0380.


NeuroMatic: An Integrated Open-Source Software Toolkit for Acquisition, Analysis and Simulation of Electrophysiological Data.

Rothman JS, Silver RA.

Front Neuroinform. 2018 Apr 4;12:14. doi: 10.3389/fninf.2018.00014. eCollection 2018.


A Commitment to Open Source in Neuroscience.

Gleeson P, Davison AP, Silver RA, Ascoli GA.

Neuron. 2017 Dec 6;96(5):964-965. doi: 10.1016/j.neuron.2017.10.013.


Assessing the Role of Inhibition in Stabilizing Neocortical Networks Requires Large-Scale Perturbation of the Inhibitory Population.

Sadeh S, Silver RA, Mrsic-Flogel TD, Muir DR.

J Neurosci. 2017 Dec 6;37(49):12050-12067. doi: 10.1523/JNEUROSCI.0963-17.2017. Epub 2017 Oct 26.


Sparse synaptic connectivity is required for decorrelation and pattern separation in feedforward networks.

Cayco-Gajic NA, Clopath C, Silver RA.

Nat Commun. 2017 Oct 24;8(1):1116. doi: 10.1038/s41467-017-01109-y.


Toward standard practices for sharing computer code and programs in neuroscience.

Eglen SJ, Marwick B, Halchenko YO, Hanke M, Sufi S, Gleeson P, Silver RA, Davison AP, Lanyon L, Abrams M, Wachtler T, Willshaw DJ, Pouzat C, Poline JB.

Nat Neurosci. 2017 May 25;20(6):770-773. doi: 10.1038/nn.4550. No abstract available.


Random-access scanning microscopy for 3D imaging in awake behaving animals.

Nadella KM, Roš H, Baragli C, Griffiths VA, Konstantinou G, Koimtzis T, Evans GJ, Kirkby PA, Silver RA.

Nat Methods. 2016 Dec;13(12):1001-1004. doi: 10.1038/nmeth.4033. Epub 2016 Oct 17.


Physical determinants of vesicle mobility and supply at a central synapse.

Rothman JS, Kocsis L, Herzog E, Nusser Z, Silver RA.

Elife. 2016 Aug 19;5. pii: e15133. doi: 10.7554/eLife.15133.


Functional Properties of Dendritic Gap Junctions in Cerebellar Golgi Cells.

Szoboszlay M, Lőrincz A, Lanore F, Vervaeke K, Silver RA, Nusser Z.

Neuron. 2016 Jun 1;90(5):1043-56. doi: 10.1016/j.neuron.2016.03.029. Epub 2016 Apr 28.


Extracting quantal properties of transmission at central synapses.

Lanore F, Silver RA.

Neuromethods. 2016;113:193-211. doi: 10.1007/978-1-4939-3411-9_10.


Nanoscale distribution of presynaptic Ca(2+) channels and its impact on vesicular release during development.

Nakamura Y, Harada H, Kamasawa N, Matsui K, Rothman JS, Shigemoto R, Silver RA, DiGregorio DA, Takahashi T.

Neuron. 2015 Jan 7;85(1):145-158. doi: 10.1016/j.neuron.2014.11.019. Epub 2014 Dec 18.


Reading dendritic activity with gap junctions.

Lanore F, Silver RA.

Nat Neurosci. 2014 Dec;17(12):1625-7. doi: 10.1038/nn.3880. No abstract available.


LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2.

Cannon RC, Gleeson P, Crook S, Ganapathy G, Marin B, Piasini E, Silver RA.

Front Neuroinform. 2014 Sep 25;8:79. doi: 10.3389/fninf.2014.00079. eCollection 2014.


Network structure within the cerebellar input layer enables lossless sparse encoding.

Billings G, Piasini E, Lőrincz A, Nusser Z, Silver RA.

Neuron. 2014 Aug 20;83(4):960-74. doi: 10.1016/j.neuron.2014.07.020. Epub 2014 Aug 7.


libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience.

Vella M, Cannon RC, Crook S, Davison AP, Ganapathy G, Robinson HP, Silver RA, Gleeson P.

Front Neuroinform. 2014 Apr 23;8:38. doi: 10.3389/fninf.2014.00038. eCollection 2014.


Glutamate-bound NMDARs arising from in vivo-like network activity extend spatio-temporal integration in a L5 cortical pyramidal cell model.

Farinella M, Ruedt DT, Gleeson P, Lanore F, Silver RA.

PLoS Comput Biol. 2014 Apr 24;10(4):e1003590. doi: 10.1371/journal.pcbi.1003590. eCollection 2014 Apr.


Data-driven modeling of synaptic transmission and integration.

Rothman JS, Silver RA.

Prog Mol Biol Transl Sci. 2014;123:305-50. doi: 10.1016/B978-0-12-397897-4.00004-8. Review.


Monitoring synaptic and neuronal activity in 3D with synthetic and genetic indicators using a compact acousto-optic lens two-photon microscope.

Fernández-Alfonso T, Nadella KM, Iacaruso MF, Pichler B, Roš H, Kirkby PA, Silver RA.

J Neurosci Methods. 2014 Jan 30;222:69-81. doi: 10.1016/j.jneumeth.2013.10.021. Epub 2013 Nov 4.


Sustaining rapid vesicular release at active zones: potential roles for vesicle tethering.

Hallermann S, Silver RA.

Trends Neurosci. 2013 Mar;36(3):185-94. doi: 10.1016/j.tins.2012.10.001. Epub 2012 Nov 17. Review.


NMDA receptors with incomplete Mg²⁺ block enable low-frequency transmission through the cerebellar cortex.

Schwartz EJ, Rothman JS, Dugué GP, Diana M, Rousseau C, Silver RA, Dieudonné S.

J Neurosci. 2012 May 16;32(20):6878-93. doi: 10.1523/JNEUROSCI.5736-11.2012.


Gap junctions compensate for sublinear dendritic integration in an inhibitory network.

Vervaeke K, Lorincz A, Nusser Z, Silver RA.

Science. 2012 Mar 30;335(6076):1624-8. doi: 10.1126/science.1215101. Epub 2012 Mar 8.


Estimation of the time course of neurotransmitter release at central synapses from the first latency of postsynaptic currents.

Minneci F, Kanichay RT, Silver RA.

J Neurosci Methods. 2012 Mar 30;205(1):49-64. doi: 10.1016/j.jneumeth.2011.12.015. Epub 2011 Dec 29.


Impact of wavefront distortion and scattering on 2-photon microscopy in mammalian brain tissue.

Chaigneau E, Wright AJ, Poland SP, Girkin JM, Silver RA.

Opt Express. 2011 Nov 7;19(23):22755-74. doi: 10.1364/OE.19.022755.


Bassoon speeds vesicle reloading at a central excitatory synapse.

Hallermann S, Fejtova A, Schmidt H, Weyhersmüller A, Silver RA, Gundelfinger ED, Eilers J.

Neuron. 2010 Nov 18;68(4):710-23. doi: 10.1016/j.neuron.2010.10.026.


Determinants of synaptic integration and heterogeneity in rebound firing explored with data-driven models of deep cerebellar nucleus cells.

Steuber V, Schultheiss NW, Silver RA, De Schutter E, Jaeger D.

J Comput Neurosci. 2011 Jun;30(3):633-58. doi: 10.1007/s10827-010-0282-z. Epub 2010 Nov 4.


Rapid desynchronization of an electrically coupled interneuron network with sparse excitatory synaptic input.

Vervaeke K, Lorincz A, Gleeson P, Farinella M, Nusser Z, Silver RA.

Neuron. 2010 Aug 12;67(3):435-51. doi: 10.1016/j.neuron.2010.06.028.


A compact Acousto-Optic Lens for 2D and 3D femtosecond based 2-photon microscopy.

Kirkby PA, Srinivas Nadella KM, Silver RA.

Opt Express. 2010 Jun 21;18(13):13721-45. doi: 10.1364/OE.18.013720.


NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail.

Gleeson P, Crook S, Cannon RC, Hines ML, Billings GO, Farinella M, Morse TM, Davison AP, Ray S, Bhalla US, Barnes SR, Dimitrova YD, Silver RA.

PLoS Comput Biol. 2010 Jun 17;6(6):e1000815. doi: 10.1371/journal.pcbi.1000815.


Neuronal arithmetic.

Silver RA.

Nat Rev Neurosci. 2010 Jul;11(7):474-89. doi: 10.1038/nrn2864. Review.


Synaptic depression enables neuronal gain control.

Rothman JS, Cathala L, Steuber V, Silver RA.

Nature. 2009 Feb 19;457(7232):1015-8. doi: 10.1038/nature07604. Epub 2009 Jan 14.


Estimation of quantal parameters with multiple-probability fluctuation analysis.

Saviane C, Silver RA.

Methods Mol Biol. 2007;403:303-17. doi: 10.1007/978-1-59745-529-9_19.


Synaptic and cellular properties of the feedforward inhibitory circuit within the input layer of the cerebellar cortex.

Kanichay RT, Silver RA.

J Neurosci. 2008 Sep 3;28(36):8955-67. doi: 10.1523/JNEUROSCI.5469-07.2008.


The contribution of single synapses to sensory representation in vivo.

Arenz A, Silver RA, Schaefer AT, Margrie TW.

Science. 2008 Aug 15;321(5891):977-80. doi: 10.1126/science.1158391.


Neuroscience. Refreshing connections.

Silver RA, Kanichay RT.

Science. 2008 Apr 11;320(5873):183-4. doi: 10.1126/science.1157589. No abstract available.


MorphML: level 1 of the NeuroML standards for neuronal morphology data and model specification.

Crook S, Gleeson P, Howell F, Svitak J, Silver RA.

Neuroinformatics. 2007 Summer;5(2):96-104. Review.


Desensitization properties of AMPA receptors at the cerebellar mossy fiber granule cell synapse.

DiGregorio DA, Rothman JS, Nielsen TA, Silver RA.

J Neurosci. 2007 Aug 1;27(31):8344-57.


neuroConstruct: a tool for modeling networks of neurons in 3D space.

Gleeson P, Steuber V, Silver RA.

Neuron. 2007 Apr 19;54(2):219-35.


Cerebellar LTD and pattern recognition by Purkinje cells.

Steuber V, Mittmann W, Hoebeek FE, Silver RA, De Zeeuw CI, Häusser M, De Schutter E.

Neuron. 2007 Apr 5;54(1):121-36.


Comparison of arterial compliance indices derived via beat-to-beat blood pressure waveforms: aging and ethnicity.

Sollers JJ 3rd, Merritt MM, Silver RA, Sadle TN, Ferrucci L, Thayer JF.

Biomed Sci Instrum. 2006;42:518-23.


Errors in the estimation of the variance: implications for multiple-probability fluctuation analysis.

Saviane C, Silver RA.

J Neurosci Methods. 2006 Jun 15;153(2):250-60. Epub 2005 Dec 27.


Flashy science: controlling neural function with light.

Thompson SM, Kao JP, Kramer RH, Poskanzer KE, Silver RA, Digregorio D, Wang SS.

J Neurosci. 2005 Nov 9;25(45):10358-65. Review. No abstract available.


Understanding blood pressure variability: spectral indices as a function of gender and age.

Sollers JJ 3rd, Merritt MM, Silver RA, Evans MK, Zonderman AB, Thayer JF.

Biomed Sci Instrum. 2005;41:43-7.


Tonically active GABA A receptors: modulating gain and maintaining the tone.

Semyanov A, Walker MC, Kullmann DM, Silver RA.

Trends Neurosci. 2004 May;27(5):262-9. Review.


High-probability uniquantal transmission at excitatory synapses in barrel cortex.

Silver RA, Lubke J, Sakmann B, Feldmeyer D.

Science. 2003 Dec 12;302(5652):1981-4.

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