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Items: 48

1.

The effects of the orthopedic metal artifact reduction (O-MAR) algorithm on contouring and dosimetry of head and neck radiotherapy patients.

Sillanpaa J, Lovelock M, Mueller B.

Med Dosim. 2019 Jul 30. pii: S0958-3947(19)30079-2. doi: 10.1016/j.meddos.2019.07.003. [Epub ahead of print]

PMID:
31375297
2.

Calcium transfer across the outer mantle epithelium in the Pacific oyster, Crassostrea gigas.

Sillanpää JK, Sundh H, Sundell KS.

Proc Biol Sci. 2018 Nov 14;285(1891). pii: 20181676. doi: 10.1098/rspb.2018.1676.

PMID:
30429301
3.

Glomus tumors treated with stereotactic radiosurgery: A retrospective study.

Tse V, Sillanpaa J, Minn AY, Teng M, Xiaoyang F, Gillis A, Millender L, Sheridan W, Wara W.

J Radiosurg SBRT. 2017;5(1):73-81.

4.

Calcium mobilisation following shell damage in the Pacific oyster, Crassostrea gigas.

Sillanpää JK, Ramesh K, Melzner F, Sundh H, Sundell K.

Mar Genomics. 2016 Jun;27:75-83. doi: 10.1016/j.margen.2016.03.001. Epub 2016 Mar 16.

PMID:
26992942
5.

Role of the Emp Pilus Subunits of Enterococcus faecium in Biofilm Formation, Adherence to Host Extracellular Matrix Components, and Experimental Infection.

Montealegre MC, Singh KV, Somarajan SR, Yadav P, Chang C, Spencer R, Sillanpää J, Ton-That H, Murray BE.

Infect Immun. 2016 Apr 22;84(5):1491-1500. doi: 10.1128/IAI.01396-15. Print 2016 May.

6.

A special report of current state of the medical physicist workforce - results of the 2012 ASTRO Comprehensive Workforce Study.

Chen E, Arnone A, Sillanpaa JK, Yu Y, Mills MD.

J Appl Clin Med Phys. 2015 May 8;16(3):5232. doi: 10.1120/jacmp.v16i3.5232. Review.

7.

Enterococcal Cell Wall Components and Structures.

Hancock LE, Murray BE, Sillanpää J.

In: Gilmore MS, Clewell DB, Ike Y, Shankar N, editors. Enterococci: From Commensals to Leading Causes of Drug Resistant Infection [Internet]. Boston: Massachusetts Eye and Ear Infirmary; 2014-.
2014 Feb 13.

8.

Contribution of individual Ebp Pilus subunits of Enterococcus faecalis OG1RF to pilus biogenesis, biofilm formation and urinary tract infection.

Sillanpää J, Chang C, Singh KV, Montealegre MC, Nallapareddy SR, Harvey BR, Ton-That H, Murray BE.

PLoS One. 2013 Jul 11;8(7):e68813. doi: 10.1371/journal.pone.0068813. Print 2013.

9.

Early-stage breast cancer treated with 3-week accelerated whole-breast radiation therapy and concomitant boost.

Chadha M, Woode R, Sillanpaa J, Lucido D, Boolbol SK, Kirstein L, Osborne MP, Feldman S, Harrison LB.

Int J Radiat Oncol Biol Phys. 2013 May 1;86(1):40-4. doi: 10.1016/j.ijrobp.2012.11.010. Epub 2013 Jan 4.

PMID:
23290443
10.

Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes.

Qin X, Galloway-Peña JR, Sillanpaa J, Roh JH, Nallapareddy SR, Chowdhury S, Bourgogne A, Choudhury T, Muzny DM, Buhay CJ, Ding Y, Dugan-Rocha S, Liu W, Kovar C, Sodergren E, Highlander S, Petrosino JF, Worley KC, Gibbs RA, Weinstock GM, Murray BE.

BMC Microbiol. 2012 Jul 7;12:135. doi: 10.1186/1471-2180-12-135.

11.

The Fsr quorum-sensing system of Enterococcus faecalis modulates surface display of the collagen-binding MSCRAMM Ace through regulation of gelE.

Pinkston KL, Gao P, Diaz-Garcia D, Sillanpää J, Nallapareddy SR, Murray BE, Harvey BR.

J Bacteriol. 2011 Sep;193(17):4317-25. doi: 10.1128/JB.05026-11. Epub 2011 Jun 24.

12.

Relative contributions of Ebp Pili and the collagen adhesin ace to host extracellular matrix protein adherence and experimental urinary tract infection by Enterococcus faecalis OG1RF.

Nallapareddy SR, Singh KV, Sillanpää J, Zhao M, Murray BE.

Infect Immun. 2011 Jul;79(7):2901-10. doi: 10.1128/IAI.00038-11. Epub 2011 Apr 19.

13.

Conservation of Ebp-type pilus genes among Enterococci and demonstration of their role in adherence of Enterococcus faecalis to human platelets.

Nallapareddy SR, Sillanpää J, Mitchell J, Singh KV, Chowdhury SA, Weinstock GM, Sullam PM, Murray BE.

Infect Immun. 2011 Jul;79(7):2911-20. doi: 10.1128/IAI.00039-11. Epub 2011 Apr 18.

14.

Importance of two Enterococcus faecium loci encoding Gls-like proteins for in vitro bile salts stress response and virulence.

Choudhury T, Singh KV, Sillanpää J, Nallapareddy SR, Murray BE.

J Infect Dis. 2011 Apr 15;203(8):1147-54. doi: 10.1093/infdis/jiq160.

15.

Characterization of the ebp(fm) pilus-encoding operon of Enterococcus faecium and its role in biofilm formation and virulence in a murine model of urinary tract infection.

Sillanpää J, Nallapareddy SR, Singh KV, Prakash VP, Fothergill T, Ton-That H, Murray BE.

Virulence. 2010 Jul-Aug;1(4):236-46.

16.

Importance of the collagen adhesin ace in pathogenesis and protection against Enterococcus faecalis experimental endocarditis.

Singh KV, Nallapareddy SR, Sillanpää J, Murray BE.

PLoS Pathog. 2010 Jan 8;6(1):e1000716. doi: 10.1371/journal.ppat.1000716. Erratum in: PLoS Pathog. 2010;6(2). doi: 10.1371/annotation/1ccae8f8-d274-4ff8-a295-815037ce9cc6.

17.

Adherence to host extracellular matrix and serum components by Enterococcus faecium isolates of diverse origin.

Zhao M, Sillanpää J, Nallapareddy SR, Murray BE.

FEMS Microbiol Lett. 2009 Nov;301(1):77-83. doi: 10.1111/j.1574-6968.2009.01806.x. Epub 2009 Oct 16.

18.

A collagen-binding adhesin, Acb, and ten other putative MSCRAMM and pilus family proteins of Streptococcus gallolyticus subsp. gallolyticus (Streptococcus bovis Group, biotype I).

Sillanpää J, Nallapareddy SR, Qin X, Singh KV, Muzny DM, Kovar CL, Nazareth LV, Gibbs RA, Ferraro MJ, Steckelberg JM, Weinstock GM, Murray BE.

J Bacteriol. 2009 Nov;191(21):6643-53. doi: 10.1128/JB.00909-09. Epub 2009 Aug 28.

19.

A family of fibrinogen-binding MSCRAMMs from Enterococcus faecalis.

Sillanpää J, Nallapareddy SR, Houston J, Ganesh VK, Bourgogne A, Singh KV, Murray BE, Höök M.

Microbiology. 2009 Jul;155(Pt 7):2390-400. doi: 10.1099/mic.0.027821-0. Epub 2009 Apr 23.

20.

Automating the initial physics chart checking process.

Furhang EE, Dolan J, Sillanpaa JK, Harrison LB.

J Appl Clin Med Phys. 2009 Feb 11;10(1):2855. Review.

21.

Distribution of genes encoding MSCRAMMs and Pili in clinical and natural populations of Enterococcus faecium.

Sillanpää J, Prakash VP, Nallapareddy SR, Murray BE.

J Clin Microbiol. 2009 Apr;47(4):896-901. doi: 10.1128/JCM.02283-08. Epub 2009 Feb 4.

22.

Adherence characteristics of endocarditis-derived Streptococcus gallolyticus ssp. gallolyticus (Streptococcus bovis biotype I) isolates to host extracellular matrix proteins.

Sillanpää J, Nallapareddy SR, Singh KV, Ferraro MJ, Murray BE.

FEMS Microbiol Lett. 2008 Dec;289(1):104-9. doi: 10.1111/j.1574-6968.2008.01378.x.

23.

Identification and phenotypic characterization of a second collagen adhesin, Scm, and genome-based identification and analysis of 13 other predicted MSCRAMMs, including four distinct pilus loci, in Enterococcus faecium.

Sillanpää J, Nallapareddy SR, Prakash VP, Qin X, Höök M, Weinstock GM, Murray BE.

Microbiology. 2008 Oct;154(Pt 10):3199-211. doi: 10.1099/mic.0.2008/017319-0.

24.

Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF.

Bourgogne A, Garsin DA, Qin X, Singh KV, Sillanpaa J, Yerrapragada S, Ding Y, Dugan-Rocha S, Buhay C, Shen H, Chen G, Williams G, Muzny D, Maadani A, Fox KA, Gioia J, Chen L, Shang Y, Arias CA, Nallapareddy SR, Zhao M, Prakash VP, Chowdhury S, Jiang H, Gibbs RA, Murray BE, Highlander SK, Weinstock GM.

Genome Biol. 2008;9(7):R110. doi: 10.1186/gb-2008-9-7-r110. Epub 2008 Jul 8.

25.

Inhibition of Enterococcus faecium adherence to collagen by antibodies against high-affinity binding subdomains of Acm.

Nallapareddy SR, Sillanpää J, Ganesh VK, Höök M, Murray BE.

Infect Immun. 2007 Jun;75(6):3192-6. Epub 2007 Apr 16.

26.

Observation of interfractional variations in lung tumor position using respiratory gated and ungated megavoltage cone-beam computed tomography.

Chang J, Mageras GS, Yorke E, De Arruda F, Sillanpaa J, Rosenzweig KE, Hertanto A, Pham H, Seppi E, Pevsner A, Ling CC, Amols H.

Int J Radiat Oncol Biol Phys. 2007 Apr 1;67(5):1548-58.

27.

The Enterococcus faecalis MSCRAMM ACE binds its ligand by the Collagen Hug model.

Liu Q, Ponnuraj K, Xu Y, Ganesh VK, Sillanpää J, Murray BE, Narayana SV, Höök M.

J Biol Chem. 2007 Jul 6;282(27):19629-37. Epub 2007 Mar 28.

28.

Low-dose megavoltage cone-beam computed tomography for lung tumors using a high-efficiency image receptor.

Sillanpaa J, Chang J, Mageras G, Yorke E, De Arruda F, Rosenzweig KE, Munro P, Seppi E, Pavkovich J, Amols H.

Med Phys. 2006 Sep;33(9):3489-97.

PMID:
17022245
29.

Endocarditis and biofilm-associated pili of Enterococcus faecalis.

Nallapareddy SR, Singh KV, Sillanpää J, Garsin DA, Höök M, Erlandsen SL, Murray BE.

J Clin Invest. 2006 Oct;116(10):2799-807.

30.

Integrating respiratory gating into a megavoltage cone-beam CT system.

Chang J, Sillanpaa J, Ling CC, Seppi E, Yorke E, Mageras G, Amols H.

Med Phys. 2006 Jul;33(7):2354-61.

PMID:
16898437
31.

Weighted expectation maximization reconstruction algorithms with application to gated megavoltage tomography.

Zhang J, Shi D, Anastasio MA, Sillanpaa J, Chang J.

Phys Med Biol. 2005 Nov 7;50(21):N299-307. Epub 2005 Oct 12.

PMID:
16237229
32.

Developments in megavoltage cone beam CT with an amorphous silicon EPID: reduction of exposure and synchronization with respiratory gating.

Sillanpaa J, Chang J, Mageras G, Riem H, Ford E, Todor D, Ling CC, Amols H.

Med Phys. 2005 Mar;32(3):819-29.

PMID:
15839355
33.

A method for determining the gantry angle for megavoltage cone beam imaging.

Sillanpaa J, Chang J, Amols H, Mageras G.

Med Phys. 2005 Feb;32(2):566-9.

PMID:
15789603
34.

Use of EPID for leaf position accuracy QA of dynamic multi-leaf collimator (DMLC) treatment.

Chang J, Obcemea CH, Sillanpaa J, Mechalakos J, Burman C.

Med Phys. 2004 Jul;31(7):2091-6.

PMID:
15305462
35.

A family of putative MSCRAMMs from Enterococcus faecalis.

Sillanpää J, Xu Y, Nallapareddy SR, Murray BE, Höök M.

Microbiology. 2004 Jul;150(Pt 7):2069-78.

PMID:
15256550
36.

Effect of work with visual display units on musculo-skeletal disorders in the office environment.

Sillanpää J, Huikko S, Nyberg M, Kivi P, Laippala P, Uitti J.

Occup Med (Lond). 2003 Oct;53(7):443-51.

PMID:
14581641
37.

A new table for work with a microscope, a solution to ergonomic problems.

Sillanpää J, Nyberg M, Laippala P.

Appl Ergon. 2003 Nov;34(6):621-8.

PMID:
14559423
38.

Multiple QTL mapping in related plant populations via a pedigree-analysis approach.

Bink M, Uimari P, Sillanpää J, Janss G, Jansen C.

Theor Appl Genet. 2002 Apr;104(5):751-762. Epub 2002 Mar 7.

PMID:
12582634
39.
40.

New equipment to lighten the work load of construction workers.

Kaukiainen A, Sillanpää J, Lappalainen J, Viljanen M, Nyberg M.

Int J Occup Saf Ergon. 2002;8(2):209-24.

PMID:
12067511
41.

Potential microbiological hazards in the production of refined paper products for food applications.

Raaska L, Sillanpää J, Sjöberg AM, Suihko ML.

J Ind Microbiol Biotechnol. 2002 Apr;28(4):225-31.

PMID:
11986924
42.

An implementation of the HACCP system in the production of food-packaging material.

Sjöberg AM, Sillanpää J, Sipiläinen-Malm T, Weber A, Raaska L.

J Ind Microbiol Biotechnol. 2002 Apr;28(4):213-8.

PMID:
11986922
43.

Inhibition of the adherence of Escherichia coli strains to basement membrane by Lactobacillus crispatus expressing an S-layer.

Horie M, Ishiyama A, Fujihira-Ueki Y, Sillanpää J, Korhonen TK, Toba T.

J Appl Microbiol. 2002;92(3):396-403.

44.

Expression of cbsA encoding the collagen-binding S-protein of Lactobacillus crispatus JCM5810 in Lactobacillus casei ATCC 393(T).

Martínez B, Sillanpää J, Smit E, Korhonen TK, Pouwels PH.

J Bacteriol. 2000 Dec;182(23):6857-61.

45.

Characterization of the collagen-binding S-layer protein CbsA of Lactobacillus crispatus.

Sillanpää J, Martínez B, Antikainen J, Toba T, Kalkkinen N, Tankka S, Lounatmaa K, Keränen J, Höök M, Westerlund-Wikström B, Pouwels PH, Korhonen TK.

J Bacteriol. 2000 Nov;182(22):6440-50.

46.

A Collagen-Binding S-Layer Protein in Lactobacillus crispatus.

Toba T, Virkola R, Westerlund B, Bjorkman Y, Sillanpaa J, Vartio T, Kalkkinen N, Korhonen TK.

Appl Environ Microbiol. 1995 Jul;61(7):2467-71.

47.

Efficacy and tolerability of felodipine ER and diltiazem SR as monotherapy in primary hypertension: a double-blind randomized study.

Thulin T, Almkvist H, Berglund L, Björnsson T, Fagher B, Henningsen N, Honkavaara M, Naukkarinen V, Nordenström P, Sillanpää J, et al.

Cardiovasc Drugs Ther. 1994 Dec;8(6):845-9.

PMID:
7742263
48.

Carvedilol and atenolol once daily in the treatment of hypertension.

Luurila OJ, Härkönen R, Hilden M, Icen R, Kohvakka A, Linna M, Sillanpää J, Vänskä O, Lukkala K.

J Hypertens Suppl. 1989 Dec;7(6):S264-5.

PMID:
2576666

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