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Integrating multiple genomic technologies to investigate an outbreak of carbapenemase-producing Enterobacter hormaechei.

Roberts LW, Harris PNA, Forde BM, Ben Zakour NL, Catchpoole E, Stanton-Cook M, Phan MD, Sidjabat HE, Bergh H, Heney C, Gawthorne JA, Lipman J, Allworth A, Chan KG, Chong TM, Yin WF, Schembri MA, Paterson DL, Beatson SA.

Nat Commun. 2020 Jan 24;11(1):466. doi: 10.1038/s41467-019-14139-5.


Bacterial identification using a SCIEX 5800 TOF/TOF MALDI research instrument and an external database.

Huber CA, Pflüger V, Reed S, Cottrell K, Sidjabat HE, Ranasinghe A, Zowawi HM, Harris P, Paterson DL.

J Microbiol Methods. 2019 Sep;164:105685. doi: 10.1016/j.mimet.2019.105685. Epub 2019 Aug 7.


Skin colonization at peripheral intravenous catheter insertion sites increases the risk of catheter colonization and infection.

Choudhury MA, Sidjabat HE, Zowawi HM, Marsh PhD N, Larsen E, Runnegar PhD N, Paterson DL, McMillan DJ, Rickard CM.

Am J Infect Control. 2019 Dec;47(12):1484-1488. doi: 10.1016/j.ajic.2019.06.002. Epub 2019 Jul 19.


Evaluation of the SpeeDx Carba (beta) multiplex real-time PCR assay for detection of NDM, KPC, OXA-48-like, IMP-4-like and VIM carbapenemase genes.

Bordin A, Trembizki E, Windsor M, Wee R, Tan LY, Buckley C, Syrmis M, Bergh H, Cottrell K, Zowawi HM, Sidjabat HE, Harris PNA, Nimmo GR, Paterson DL, Whiley DM.

BMC Infect Dis. 2019 Jul 2;19(1):571. doi: 10.1186/s12879-019-4176-z.


Draft Genome Sequence of Aeromonas dhakensis, Isolated from a Patient with Fatal Necrotizing Fasciitis.

Melo-Bolivar JF, Sinclair HA, Sidjabat HE.

Microbiol Resour Announc. 2019 May 30;8(22). pii: e00009-19. doi: 10.1128/MRA.00009-19.


Identification of carbapenem-resistant Pseudomonas aeruginosa in selected hospitals of the Gulf Cooperation Council States: dominance of high-risk clones in the region.

Zowawi HM, Syrmis MW, Kidd TJ, Balkhy HH, Walsh TR, Al Johani SM, Al Jindan RY, Alfaresi M, Ibrahim E, Al-Jardani A, Al Salman J, Dashti AA, Sidjabat HE, Baz O, Trembizki E, Whiley DM, Paterson DL.

J Med Microbiol. 2018 Jun;67(6):846-853. doi: 10.1099/jmm.0.000730. Epub 2018 Apr 17.


The use of SWATH to analyse the dynamic changes of bacterial proteome of carbapanemase-producing Escherichia coli under antibiotic pressure.

Sidjabat HE, Gien J, Kvaskoff D, Ashman K, Vaswani K, Reed S, McGeary RP, Paterson DL, Bordin A, Schenk G.

Sci Rep. 2018 Mar 1;8(1):3871. doi: 10.1038/s41598-018-21984-9.


Protein-inspired antibiotics active against vancomycin- and daptomycin-resistant bacteria.

Blaskovich MAT, Hansford KA, Gong Y, Butler MS, Muldoon C, Huang JX, Ramu S, Silva AB, Cheng M, Kavanagh AM, Ziora Z, Premraj R, Lindahl F, Bradford TA, Lee JC, Karoli T, Pelingon R, Edwards DJ, Amado M, Elliott AG, Phetsang W, Daud NH, Deecke JE, Sidjabat HE, Ramaologa S, Zuegg J, Betley JR, Beevers APG, Smith RAG, Roberts JA, Paterson DL, Cooper MA.

Nat Commun. 2018 Jan 2;9(1):22. doi: 10.1038/s41467-017-02123-w.


Copper Ions and Coordination Complexes as Novel Carbapenem Adjuvants.

Djoko KY, Achard MES, Phan MD, Lo AW, Miraula M, Prombhul S, Hancock SJ, Peters KM, Sidjabat HE, Harris PN, Mitić N, Walsh TR, Anderson GJ, Shafer WM, Paterson DL, Schenk G, McEwan AG, Schembri MA.

Antimicrob Agents Chemother. 2018 Jan 25;62(2). pii: e02280-17. doi: 10.1128/AAC.02280-17. Print 2018 Feb.


Structure-activity relationship study and optimisation of 2-aminopyrrole-1-benzyl-4,5-diphenyl-1H-pyrrole-3-carbonitrile as a broad spectrum metallo-β-lactamase inhibitor.

McGeary RP, Tan DTC, Selleck C, Monteiro Pedroso M, Sidjabat HE, Schenk G.

Eur J Med Chem. 2017 Sep 8;137:351-364. doi: 10.1016/j.ejmech.2017.05.061. Epub 2017 Jun 3.


Culture-independent detection of chlorhexidine resistance genes qacA/B and smr in bacterial DNA recovered from body sites treated with chlorhexidine-containing dressings.

Choudhury MA, Sidjabat HE, Rathnayake IU, Gavin N, Chan RJ, Marsh N, Banu S, Huygens F, Paterson DL, Rickard CM, McMillan DJ.

J Med Microbiol. 2017 Apr;66(4):447-453. doi: 10.1099/jmm.0.000463.


Draft Genome Sequence of Roseomonas mucosa Strain AU37, Isolated from a Peripheral Intravenous Catheter.

Abu Choudhury M, Wailan AM, Sidjabat HE, Zhang L, Marsh N, Rickard CM, Davies MR, McMillan DJ.

Genome Announc. 2017 Apr 13;5(15). pii: e00128-17. doi: 10.1128/genomeA.00128-17.


Enhancement of antibiotic-activity through complexation with metal ions - Combined ITC, NMR, enzymatic and biological studies.

Möhler JS, Kolmar T, Synnatschke K, Hergert M, Wilson LA, Ramu S, Elliott AG, Blaskovich MA, Sidjabat HE, Paterson DL, Schenk G, Cooper MA, Ziora ZM.

J Inorg Biochem. 2017 Feb;167:134-141. doi: 10.1016/j.jinorgbio.2016.11.028. Epub 2016 Nov 24.


Detection of carbapenemase activity in Enterobacteriaceae using LC-MS/MS in comparison with the neo-rapid CARB kit using direct visual assessment and colorimetry.

Huber CA, Sidjabat HE, Zowawi HM, Kvaskoff D, Reed S, McNamara JF, McCarthy KL, Harris P, Toh B, Wailan AM, Paterson DL.

J Microbiol Methods. 2016 Dec;131:68-72. doi: 10.1016/j.mimet.2016.10.005. Epub 2016 Oct 11.


Melioidosis in a patient with chronic rhinosinusitis.

Phillips NM, Cervin A, Earnshaw J, Sidjabat HE.

J Laryngol Otol. 2016 Jul;130 Suppl 4:S60-2. doi: 10.1017/S0022215116008276. Review.


Mechanisms Involved in Acquisition of blaNDM Genes by IncA/C2 and IncFIIY Plasmids.

Wailan AM, Sidjabat HE, Yam WK, Alikhan NF, Petty NK, Sartor AL, Williamson DA, Forde BM, Schembri MA, Beatson SA, Paterson DL, Walsh TR, Partridge SR.

Antimicrob Agents Chemother. 2016 Jun 20;60(7):4082-8. doi: 10.1128/AAC.00368-16. Print 2016 Jul.


Design, synthesis, and in vitro and biological evaluation of potent amino acid-derived thiol inhibitors of the metallo-β-lactamase IMP-1.

Arjomandi OK, Hussein WM, Vella P, Yusof Y, Sidjabat HE, Schenk G, McGeary RP.

Eur J Med Chem. 2016 May 23;114:318-27. doi: 10.1016/j.ejmech.2016.03.017. Epub 2016 Mar 9.


Genotypic and phenotypic identification of Aeromonas species and CphA-mediated carbapenem resistance in Queensland, Australia.

Sinclair HA, Heney C, Sidjabat HE, George NM, Bergh H, Anuj SN, Nimmo GR, Paterson DL.

Diagn Microbiol Infect Dis. 2016 May;85(1):98-101. doi: 10.1016/j.diagmicrobio.2016.02.005. Epub 2016 Mar 10.


Draft Genome Sequence of the Oral Commensal Streptococcus oralis 89a with Interference Activity against Respiratory Pathogens.

Sidjabat HE, Grahn Håkansson E, Cervin A.

Genome Announc. 2016 Jan 14;4(1). pii: e01546-15. doi: 10.1128/genomeA.01546-15.


Genomic Characteristics of NDM-Producing Enterobacteriaceae Isolates in Australia and Their blaNDM Genetic Contexts.

Wailan AM, Paterson DL, Kennedy K, Ingram PR, Bursle E, Sidjabat HE.

Antimicrob Agents Chemother. 2015 Oct 19;60(1):136-41. doi: 10.1128/AAC.01243-15. Print 2016 Jan.


Draft Genome Sequences of Burkholderia pseudomallei and Staphylococcus aureus, Isolated from a Patient with Chronic Rhinosinusitis.

Sidjabat HE, Cottrell K, Cervin A.

Genome Announc. 2015 Oct 1;3(5). pii: e01075-15. doi: 10.1128/genomeA.01075-15.


Genetic Contexts of blaNDM-1 in Patients Carrying Multiple NDM-Producing Strains.

Wailan AM, Sartor AL, Zowawi HM, Perry JD, Paterson DL, Sidjabat HE.

Antimicrob Agents Chemother. 2015 Dec;59(12):7405-10. doi: 10.1128/AAC.01319-15. Epub 2015 Sep 21.


Draft Genome Sequences of Two IMP-4-Producing Escherichia coli Sequence Type 131 Isolates in Australia.

Sidjabat HE, Robson J, Paterson DL.

Genome Announc. 2015 Aug 27;3(4). pii: e00983-15. doi: 10.1128/genomeA.00983-15.


Active surveillance for multidrug-resistant Gram-negative bacteria in the intensive care unit.

Abbott IJ, Jenney AW, Spelman DW, Pilcher DV, Sidjabat HE, Richardson LJ, Paterson DL, Peleg AY.

Pathology. 2015 Oct;47(6):575-9. doi: 10.1097/PAT.0000000000000302.


Synergistic killing of NDM-producing MDR Klebsiella pneumoniae by two 'old' antibiotics-polymyxin B and chloramphenicol.

Abdul Rahim N, Cheah SE, Johnson MD, Yu H, Sidjabat HE, Boyce J, Butler MS, Cooper MA, Fu J, Paterson DL, Nation RL, Bergen PJ, Velkov T, Li J.

J Antimicrob Chemother. 2015 Sep;70(9):2589-97. doi: 10.1093/jac/dkv135. Epub 2015 May 28.


Dominance of IMP-4-producing enterobacter cloacae among carbapenemase-producing Enterobacteriaceae in Australia.

Sidjabat HE, Townell N, Nimmo GR, George NM, Robson J, Vohra R, Davis L, Heney C, Paterson DL.

Antimicrob Agents Chemother. 2015 Jul;59(7):4059-66. doi: 10.1128/AAC.04378-14. Epub 2015 Apr 27.


Draft Genome Sequence of NDM-5-Producing Escherichia coli Sequence Type 648 and Genetic Context of blaNDM-5 in Australia.

Wailan AM, Paterson DL, Caffery M, Sowden D, Sidjabat HE.

Genome Announc. 2015 Apr 9;3(2). pii: e00194-15. doi: 10.1128/genomeA.00194-15.


Multidrug-resistant Escherichia coli in Asia: epidemiology and management.

Sidjabat HE, Paterson DL.

Expert Rev Anti Infect Ther. 2015 May;13(5):575-91. doi: 10.1586/14787210.2015.1028365. Epub 2015 Mar 24. Review.


Local acquisition and nosocomial transmission of Klebsiella pneumoniae harbouring the blaNDM-1 gene in Australia.

Tai AY, Stuart RL, Sidjabat HE, Lemoh CN, Rogers BA, Graham M, Paterson DL, Korman TM.

Med J Aust. 2015 Mar 16;202(5):270-2. No abstract available.


Molecular Epidemiology and Mechanisms of Carbapenem Resistance of Acinetobacter spp. in Asia and Oceania.

Kamolvit W, Sidjabat HE, Paterson DL.

Microb Drug Resist. 2015 Aug;21(4):424-34. doi: 10.1089/mdr.2014.0234. Epub 2015 Feb 25. Review.


Sequence type 131 fimH30 and fimH41 subclones amongst Escherichia coli isolates in Australia and New Zealand.

Rogers BA, Ingram PR, Runnegar N, Pitman MC, Freeman JT, Athan E, Havers S, Sidjabat HE, Gunning E, De Almeida M, Styles K, Paterson DL; ASID CRN.

Int J Antimicrob Agents. 2015 Apr;45(4):351-8. doi: 10.1016/j.ijantimicag.2014.11.015. Epub 2015 Jan 13.


Evaluation of phenotypic screening tests for carbapenemase production in Pseudomonas aeruginosa from patients with cystic fibrosis.

Tai AS, Sidjabat HE, Kidd TJ, Whiley DM, Paterson DL, Bell SC.

J Microbiol Methods. 2015 Apr;111:105-7. doi: 10.1016/j.mimet.2015.02.006. Epub 2015 Feb 10.


Molecular epidemiology of carbapenem-resistant Acinetobacter baumannii isolates in the Gulf Cooperation Council States: dominance of OXA-23-type producers.

Zowawi HM, Sartor AL, Sidjabat HE, Balkhy HH, Walsh TR, Al Johani SM, AlJindan RY, Alfaresi M, Ibrahim E, Al-Jardani A, Al Salman J, Dashti AA, Johani K, Paterson DL.

J Clin Microbiol. 2015 Mar;53(3):896-903. doi: 10.1128/JCM.02784-14. Epub 2015 Jan 7.


A case of IMP-4-, OXA-421-, OXA-96-, and CARB-2-producing Acinetobacter pittii sequence type 119 in Australia.

Kamolvit W, Derrington P, Paterson DL, Sidjabat HE.

J Clin Microbiol. 2015 Feb;53(2):727-30. doi: 10.1128/JCM.02726-14. Epub 2014 Nov 26.


Evaluation of a new chromogenic medium, chromID OXA-48, for recovery of carbapenemase-producing Enterobacteriaceae from patients at a university hospital in Turkey.

Zarakolu P, Day KM, Sidjabat HE, Kamolvit W, Lanyon CV, Cummings SP, Paterson DL, Akova M, Perry JD.

Eur J Clin Microbiol Infect Dis. 2015 Mar;34(3):519-25. doi: 10.1007/s10096-014-2255-z. Epub 2014 Oct 12.


Outbreaks of multidrug-resistant Acinetobacter baumannii strains in a Kenyan teaching hospital.

Huber CA, Sartor AL, McOdimba F, Shah R, Shivachi P, Sidjabat HE, Revathi G, Paterson DL.

J Glob Antimicrob Resist. 2014 Sep;2(3):190-193. doi: 10.1016/j.jgar.2014.03.007. Epub 2014 Apr 28.


Characterization of an IncN2-type blaNDM-₁-carrying plasmid in Escherichia coli ST131 and Klebsiella pneumoniae ST11 and ST15 isolates in Thailand.

Netikul T, Sidjabat HE, Paterson DL, Kamolvit W, Tantisiriwat W, Steen JA, Kiratisin P.

J Antimicrob Chemother. 2014 Nov;69(11):3161-3. doi: 10.1093/jac/dku275. Epub 2014 Aug 4. No abstract available.


Interspecies transfer of blaIMP-4 in a patient with prolonged colonization by IMP-4-producing Enterobacteriaceae.

Sidjabat HE, Heney C, George NM, Nimmo GR, Paterson DL.

J Clin Microbiol. 2014 Oct;52(10):3816-8. doi: 10.1128/JCM.01491-14. Epub 2014 Jul 23.


Expansive spread of IncI1 plasmids carrying blaCMY-2 amongst Escherichia coli.

Sidjabat HE, Seah KY, Coleman L, Sartor A, Derrington P, Heney C, Faoagali J, Nimmo GR, Paterson DL.

Int J Antimicrob Agents. 2014 Sep;44(3):203-8. doi: 10.1016/j.ijantimicag.2014.04.016. Epub 2014 Jun 6.


Molecular epidemiology of NDM-1-producing Enterobacteriaceae and Acinetobacter baumannii isolates from Pakistan.

Sartor AL, Raza MW, Abbasi SA, Day KM, Perry JD, Paterson DL, Sidjabat HE.

Antimicrob Agents Chemother. 2014 Sep;58(9):5589-93. doi: 10.1128/AAC.02425-14. Epub 2014 Jun 30.


Prevalence of multidrug-resistant organisms and risk factors for carriage in long-term care facilities: a nested case-control study.

Lim CJ, Cheng AC, Kennon J, Spelman D, Hale D, Melican G, Sidjabat HE, Paterson DL, Kong DC, Peleg AY.

J Antimicrob Chemother. 2014 Jul;69(7):1972-80. doi: 10.1093/jac/dku077. Epub 2014 Apr 7.


Molecular characterization of carbapenemase-producing Escherichia coli and Klebsiella pneumoniae in the countries of the Gulf cooperation council: dominance of OXA-48 and NDM producers.

Zowawi HM, Sartor AL, Balkhy HH, Walsh TR, Al Johani SM, AlJindan RY, Alfaresi M, Ibrahim E, Al-Jardani A, Al-Abri S, Al Salman J, Dashti AA, Kutbi AH, Schlebusch S, Sidjabat HE, Paterson DL.

Antimicrob Agents Chemother. 2014 Jun;58(6):3085-90. doi: 10.1128/AAC.02050-13. Epub 2014 Mar 17.


Community-onset Escherichia coli infection resistant to expanded-spectrum cephalosporins in low-prevalence countries.

Rogers BA, Ingram PR, Runnegar N, Pitman MC, Freeman JT, Athan E, Havers SM, Sidjabat HE, Jones M, Gunning E, De Almeida M, Styles K, Paterson DL; Australasian Society for Infectious Diseases Clinical Research Network.

Antimicrob Agents Chemother. 2014;58(4):2126-34. doi: 10.1128/AAC.02052-13. Epub 2014 Jan 27.


Co-selection may explain high rates of ciprofloxacin non-susceptible Escherichia coli from retail poultry reared without prior fluoroquinolone exposure.

Ingram PR, Rogers BA, Sidjabat HE, Gibson JS, Inglis TJ.

J Med Microbiol. 2013 Nov;62(Pt 11):1743-6. doi: 10.1099/jmm.0.062729-0.


Molecular analysis of the Acinetobacter baumannii biofilm-associated protein.

Goh HM, Beatson SA, Totsika M, Moriel DG, Phan MD, Szubert J, Runnegar N, Sidjabat HE, Paterson DL, Nimmo GR, Lipman J, Schembri MA.

Appl Environ Microbiol. 2013 Nov;79(21):6535-43. doi: 10.1128/AEM.01402-13. Epub 2013 Aug 16.


Rectal colonization with New Delhi metallo-β-lactamase-1-producing Escherichia coli prior to transrectal ultrasound (TRUS)-guided prostate biopsy.

Williamson DA, Freeman JT, Roberts SA, Heffernan H, Dyet K, Paterson DL, Rogers BA, Sidjabat HE, Masters J.

J Antimicrob Chemother. 2013 Dec;68(12):2957-9. doi: 10.1093/jac/dkt266. Epub 2013 Jul 3. No abstract available.


Prevalence of NDM-1 carbapenemase in patients with diarrhoea in Pakistan and evaluation of two chromogenic culture media.

Day KM, Salman M, Kazi B, Sidjabat HE, Silvey A, Lanyon CV, Cummings SP, Ali MN, Raza MW, Paterson DL, Perry JD.

J Appl Microbiol. 2013 Jun;114(6):1810-6. doi: 10.1111/jam.12171. Epub 2013 Mar 6.


Treatment options for New Delhi metallo-beta-lactamase-harboring enterobacteriaceae.

Rogers BA, Sidjabat HE, Silvey A, Anderson TL, Perera S, Li J, Paterson DL.

Microb Drug Resist. 2013 Apr;19(2):100-3. doi: 10.1089/mdr.2012.0063. Epub 2013 Jan 18.


Emergence of bla(OXA-181)-carrying ColE plasmid in Klebsiella pneumoniae in Australia.

Sidjabat HE, Kennedy K, Silvey A, Collignon P, Paterson DL.

Int J Antimicrob Agents. 2013 Mar;41(3):294-6. doi: 10.1016/j.ijantimicag.2012.11.003. Epub 2013 Jan 10. No abstract available.


Predominance of VREfm ST203 subgroup in Queensland.

Kamolvit W, Sidjabat HE, Nimmo GR, Anuj SN, Bergh H, Richardson LJ, Paterson DL.

Pathology. 2013 Jan;45(1):99. doi: 10.1097/PAT.0b013e32835b68d2. No abstract available.


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