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Items: 1 to 50 of 204

1.

The Gut Microbial Diversity of Newly Diagnosed Diabetics but Not of Prediabetics Is Significantly Different from That of Healthy Nondiabetics.

Gaike AH, Paul D, Bhute S, Dhotre DP, Pande P, Upadhyaya S, Reddy Y, Sampath R, Ghosh D, Chandraprabha D, Acharya J, Banerjee G, Sinkar VP, Ghaskadbi SS, Shouche YS.

mSystems. 2020 Mar 31;5(2). pii: e00578-19. doi: 10.1128/mSystems.00578-19.

2.

Gut, oral and skin microbiome of Indian patrilineal families reveal perceptible association with age.

Chaudhari DS, Dhotre DP, Agarwal DM, Gaike AH, Bhalerao D, Jadhav P, Mongad D, Lubree H, Sinkar VP, Patil UK, Salvi S, Bavdekar A, Juvekar SK, Shouche YS.

Sci Rep. 2020 Mar 30;10(1):5685. doi: 10.1038/s41598-020-62195-5.

3.

Gut microbial diversity during pregnancy and early infancy: an exploratory study in the Indian population.

Kumbhare SV, Patangia DV, Mongad DS, Bora A, Bavdekar AR, Shouche YS.

FEMS Microbiol Lett. 2020 Feb 1;367(3). pii: fnaa022. doi: 10.1093/femsle/fnaa022.

PMID:
32053163
4.

Fungal Planet description sheets: 868-950.

Crous PW, Carnegie AJ, Wingfield MJ, Sharma R, Mughini G, Noordeloos ME, Santini A, Shouche YS, Bezerra JDP, Dima B, Guarnaccia V, Imrefi I, Jurjević Ž, Knapp DG, Kovács GM, Magistà D, Perrone G, Rämä T, Rebriev YA, Shivas RG, Singh SM, Souza-Motta CM, Thangavel R, Adhapure NN, Alexandrova AV, Alfenas AC, Alfenas RF, Alvarado P, Alves AL, Andrade DA, Andrade JP, Barbosa RN, Barili A, Barnes CW, Baseia IG, Bellanger JM, Berlanas C, Bessette AE, Bessette AR, Biketova AY, Bomfim FS, Brandrud TE, Bransgrove K, Brito ACQ, Cano-Lira JF, Cantillo T, Cavalcanti AD, Cheewangkoon R, Chikowski RS, Conforto C, Cordeiro TRL, Craine JD, Cruz R, Damm U, de Oliveira RJV, de Souza JT, de Souza HG, Dearnaley JDW, Dimitrov RA, Dovana F, Erhard A, Esteve-Raventós F, Félix CR, Ferisin G, Fernandes RA, Ferreira RJ, Ferro LO, Figueiredo CN, Frank JL, Freire KTLS, García D, Gené J, Gêsiorska A, Gibertoni TB, Gondra RAG, Gouliamova DE, Gramaje D, Guard F, Gusmão LFP, Haitook S, Hirooka Y, Houbraken J, Hubka V, Inamdar A, Iturriaga T, Iturrieta-González I, Jadan M, Jiang N, Justo A, Kachalkin AV, Kapitonov VI, Karadelev M, Karakehian J, Kasuya T, Kautmanová I, Kruse J, Kušan I, Kuznetsova TA, Landell MF, Larsson KH, Lee HB, Lima DX, Lira CRS, Machado AR, Madrid H, Magalhães OMC, Majerova H, Malysheva EF, Mapperson RR, Marbach PAS, Martín MP, Martín-Sanz A, Matočec N, McTaggart AR, Mello JF, Melo RFR, Mešić A, Michereff SJ, Miller AN, Minoshima A, Molinero-Ruiz L, Morozova OV, Mosoh D, Nabe M, Naik R, Nara K, Nascimento SS, Neves RP, Olariaga I, Oliveira RL, Oliveira TGL, Ono T, Ordoñez ME, Ottoni AM, Paiva LM, Pancorbo F, Pant B, Pawłowska J, Peterson SW, Raudabaugh DB, Rodríguez-Andrade E, Rubio E, Rusevska K, Santiago ALCMA, Santos ACS, Santos C, Sazanova NA, Shah S, Sharma J, Silva BDB, Siquier JL, Sonawane MS, Stchigel AM, Svetasheva T, Tamakeaw N, Telleria MT, Tiago PV, Tian CM, Tkalčec Z, Tomashevskaya MA, Truong HH, Vecherskii MV, Visagie CM, Vizzini A, Yilmaz N, Zmitrovich IV, Zvyagina EA, Boekhout T, Kehlet T, Læssøe T, Groenewald JZ.

Persoonia. 2019 Jun;42:291-473. doi: 10.3767/persoonia.2019.42.11. Epub 2019 Jul 19.

5.

Diversity of Onygenalean Fungi in Keratin-Rich Habitats of Maharashtra (India) and Description of Three Novel Taxa.

Sharma R, Shouche YS.

Mycopathologia. 2020 Feb;185(1):67-85. doi: 10.1007/s11046-019-00346-7. Epub 2019 Jun 11.

PMID:
31187339
6.

Factors influencing the gut microbiome in children: from infancy to childhood.

Kumbhare SV, Patangia DVV, Patil RH, Shouche YS, Patil NP.

J Biosci. 2019 Jun;44(2). pii: 49. Review.

7.

Author Correction: Functional eubacteria species along with trans-domain gut inhabitants favour dysgenic diversity in oxalate stone disease.

Suryavanshi MV, Bhute SS, Gune RP, Shouche YS.

Sci Rep. 2019 May 23;9(1):7986. doi: 10.1038/s41598-019-41872-0.

8.

Diversity and Succession of Microbiota during Fermentation of the Traditional Indian Food Idli.

Mandhania MH, Paul D, Suryavanshi MV, Sharma L, Chowdhury S, Diwanay SS, Diwanay SS, Shouche YS, Patole MS.

Appl Environ Microbiol. 2019 Jun 17;85(13). pii: e00368-19. doi: 10.1128/AEM.00368-19. Print 2019 Jul 1.

9.

Comparison of Small Gut and Whole Gut Microbiota of First-Degree Relatives With Adult Celiac Disease Patients and Controls.

Bodkhe R, Shetty SA, Dhotre DP, Verma AK, Bhatia K, Mishra A, Kaur G, Pande P, Bangarusamy DK, Santosh BP, Perumal RC, Ahuja V, Shouche YS, Makharia GK.

Front Microbiol. 2019 Feb 8;10:164. doi: 10.3389/fmicb.2019.00164. eCollection 2019.

10.

Mining the Core Gut Microbiome from a Sample Indian Population.

Kulkarni AS, Kumbhare SV, Dhotre DP, Shouche YS.

Indian J Microbiol. 2019 Mar;59(1):90-95. doi: 10.1007/s12088-018-0742-0. Epub 2018 May 18.

11.

Bacterial load and defective monocyte-derived macrophage bacterial phagocytosis in biomass smoke-related COPD.

Ghosh B, Gaike AH, Pyasi K, Brashier B, Das VV, Londhe JD, Juvekar S, Shouche YS, Donnelly LE, Salvi SS, Barnes PJ.

Eur Respir J. 2019 Feb 28;53(2). pii: 1702273. doi: 10.1183/13993003.02273-2017. Print 2019 Feb.

12.

Functional eubacteria species along with trans-domain gut inhabitants favour dysgenic diversity in oxalate stone disease.

Suryavanshi MV, Bhute SS, Gune RP, Shouche YS.

Sci Rep. 2018 Nov 9;8(1):16598. doi: 10.1038/s41598-018-33773-5. Erratum in: Sci Rep. 2019 May 23;9(1):7986.

13.

Comparative genome analysis reveals key genetic factors associated with probiotic property in Enterococcus faecium strains.

Ghattargi VC, Gaikwad MA, Meti BS, Nimonkar YS, Dixit K, Prakash O, Shouche YS, Pawar SP, Dhotre DP.

BMC Genomics. 2018 Sep 4;19(1):652. doi: 10.1186/s12864-018-5043-9.

14.

Cultivable Microbial Diversity Associated With Cellular Phones.

Kurli R, Chaudhari D, Pansare AN, Khairnar M, Shouche YS, Rahi P.

Front Microbiol. 2018 Jun 7;9:1229. doi: 10.3389/fmicb.2018.01229. eCollection 2018.

15.

Molecular profiling of mucosal tissue associated microbiota in patients manifesting acute exacerbations and remission stage of ulcerative colitis.

Walujkar SA, Kumbhare SV, Marathe NP, Patangia DV, Lawate PS, Bharadwaj RS, Shouche YS.

World J Microbiol Biotechnol. 2018 May 23;34(6):76. doi: 10.1007/s11274-018-2449-0.

PMID:
29796862
16.

Survey of probiotic preparations and labeling practices in Indian market.

Ghattargi VC, Kalam SH, Pandit SS, Pawar SP, Shouche YS.

Indian J Med Microbiol. 2018 Jan-Mar;36(1):116-118. doi: 10.4103/ijmm.IJMM_18_63.

17.

Metabolite profiling for biomarkers in Schistosoma haematobium infection and associated bladder pathologies.

Adebayo AS, Mundhe SD, Awobode HO, Onile OS, Agunloye AM, Isokpehi RD, Shouche YS, Santhakumari B, Anumudu CI.

PLoS Negl Trop Dis. 2018 Apr 30;12(4):e0006452. doi: 10.1371/journal.pntd.0006452. eCollection 2018 Apr.

18.

Characterization of Solibacillus silvestris strain AM1 that produces amyloid bioemulsifier.

Markande AR, Vemuluri VR, Shouche YS, Nerurkar AS.

J Basic Microbiol. 2018 Jun;58(6):523-531. doi: 10.1002/jobm.201700685. Epub 2018 Apr 25.

PMID:
29694672
19.

Genomic and physiological analyses of an indigenous strain, Enterococcus faecium 17OM39.

Ghattargi VC, Nimonkar YS, Burse SA, Davray D, Kumbhare SV, Shetty SA, Gaikwad MA, Suryavanshi MV, Doijad SP, Utage B, Sharma OP, Shouche YS, Meti BS, Pawar SP.

Funct Integr Genomics. 2018 Jul;18(4):385-399. doi: 10.1007/s10142-018-0596-x. Epub 2018 Mar 19.

PMID:
29556852
20.

Microbacterium telephonicum sp. nov., isolated from the screen of a cellular phone.

Rahi P, Kurli R, Pansare AN, Khairnar M, Jagtap S, Patel NB, Dastager SG, Lawson PA, Shouche YS.

Int J Syst Evol Microbiol. 2018 Apr;68(4):1052-1058. doi: 10.1099/ijsem.0.002622. Epub 2018 Feb 9.

PMID:
29458489
21.

Fungal Planet description sheets: 558-624.

Crous PW, Wingfield MJ, Burgess TI, Hardy GESJ, Barber PA, Alvarado P, Barnes CW, Buchanan PK, Heykoop M, Moreno G, Thangavel R, van der Spuy S, Barili A, Barrett S, Cacciola SO, Cano-Lira JF, Crane C, Decock C, Gibertoni TB, Guarro J, Guevara-Suarez M, Hubka V, Kolařík M, Lira CRS, Ordoñez ME, Padamsee M, Ryvarden L, Soares AM, Stchigel AM, Sutton DA, Vizzini A, Weir BS, Acharya K, Aloi F, Baseia IG, Blanchette RA, Bordallo JJ, Bratek Z, Butler T, Cano-Canals J, Carlavilla JR, Chander J, Cheewangkoon R, Cruz RHSF, da Silva M, Dutta AK, Ercole E, Escobio V, Esteve-Raventós F, Flores JA, Gené J, Góis JS, Haines L, Held BW, Jung MH, Hosaka K, Jung T, Jurjević Ž, Kautman V, Kautmanova I, Kiyashko AA, Kozanek M, Kubátová A, Lafourcade M, La Spada F, Latha KPD, Madrid H, Malysheva EF, Manimohan P, Manjón JL, Martín MP, Mata M, Merényi Z, Morte A, Nagy I, Normand AC, Paloi S, Pattison N, Pawłowska J, Pereira OL, Petterson ME, Picillo B, Raj KNA, Roberts A, Rodríguez A, Rodríguez-Campo FJ, Romański M, Ruszkiewicz-Michalska M, Scanu B, Schena L, Semelbauer M, Sharma R, Shouche YS, Silva V, Staniaszek-Kik M, Stielow JB, Tapia C, Taylor PWJ, Toome-Heller M, Vabeikhokhei JMC, van Diepeningen AD, Van Hoa N, M VT, Wiederhold NP, Wrzosek M, Zothanzama J, Groenewald JZ.

Persoonia. 2017 Jun;38:240-384. doi: 10.3767/003158517X698941. Epub 2017 Jun 20.

22.

Correction: The microbiome in urogenital schistosomiasis and induced bladder pathologies.

Adebayo AS, Survayanshi M, Bhute S, Agunloye AM, Isokpehi RD, Anumudu CI, Shouche YS.

PLoS Negl Trop Dis. 2017 Nov 15;11(11):e0006067. doi: 10.1371/journal.pntd.0006067. eCollection 2017 Nov.

23.

A cross-sectional comparative study of gut bacterial community of Indian and Finnish children.

Kumbhare SV, Kumar H, Chowdhury SP, Dhotre DP, Endo A, Mättö J, Ouwehand AC, Rautava S, Joshi R, Patil NP, Patil RH, Isolauri E, Bavdekar AR, Salminen S, Shouche YS.

Sci Rep. 2017 Sep 5;7(1):10555. doi: 10.1038/s41598-017-11215-y.

24.

Reclassification of Phycicola gilvus (Lee et al. 2008) and Leifsonia pindariensis (Reddy et al. 2008) as Microterricola gilva comb. nov. and Microterricola pindariensis comb. nov. and emended description of the genus Microterricola.

Dhotre DP, Rajabal V, Sharma A, Kulkarni GJ, Prakash O, Vemuluri VR, Joseph N, Rahi P, Shouche YS.

Int J Syst Evol Microbiol. 2017 Aug;67(8):2766-2772. doi: 10.1099/ijsem.0.002019.

PMID:
28857730
25.

The microbiome in urogenital schistosomiasis and induced bladder pathologies.

Adebayo AS, Suryavanshi MV, Bhute S, Agunloye AM, Isokpehi RD, Anumudu CI, Shouche YS.

PLoS Negl Trop Dis. 2017 Aug 9;11(8):e0005826. doi: 10.1371/journal.pntd.0005826. eCollection 2017 Aug. Erratum in: PLoS Negl Trop Dis. 2017 Nov 15;11(11):e0006067.

26.

Description of Lysinibacillus telephonicus sp. nov., isolated from the screen of a cellular phone.

Rahi P, Kurli R, Khairnar M, Jagtap S, Pansare AN, Dastager SG, Shouche YS.

Int J Syst Evol Microbiol. 2017 Jul;67(7):2289-2295. doi: 10.1099/ijsem.0.001943. Epub 2017 Jul 12.

PMID:
28699866
27.

Deep Sequencing Reveals Highly Variable Gut Microbial Composition of Invasive Fish Mossambicus Tilapia (Oreochromis mossambicus) Collected from Two Different Habitats.

Gaikwad SS, Shouche YS, Gade WN.

Indian J Microbiol. 2017 Jun;57(2):235-240. doi: 10.1007/s12088-017-0641-9. Epub 2017 Feb 7.

28.

Optimization of Nutrients and Culture Conditions for Alkaline Protease Production Using Two Endophytic Micrococci: Micrococcus aloeverae and Micrococcus yunnanensis.

Prakash O, Nimonkar Y, Chavadar MS, Bharti N, Pawar S, Sharma A, Shouche YS.

Indian J Microbiol. 2017 Jun;57(2):218-225. doi: 10.1007/s12088-017-0638-4. Epub 2017 Jan 21.

29.

Enhanced Detoxification of Arsenic Under Carbon Starvation: A New Insight into Microbial Arsenic Physiology.

Nandre VS, Bachate SP, Salunkhe RC, Bagade AV, Shouche YS, Kodam KM.

Curr Microbiol. 2017 May;74(5):614-622. doi: 10.1007/s00284-017-1203-4. Epub 2017 Mar 10.

PMID:
28280926
30.

Gut Microbial Diversity Assessment of Indian Type-2-Diabetics Reveals Alterations in Eubacteria, Archaea, and Eukaryotes.

Bhute SS, Suryavanshi MV, Joshi SM, Yajnik CS, Shouche YS, Ghaskadbi SS.

Front Microbiol. 2017 Feb 14;8:214. doi: 10.3389/fmicb.2017.00214. eCollection 2017.

31.

Draft genome sequence of Lactobacillus plantarum strains E2C2 and E2C5 isolated from human stool culture.

Suryavanshi MV, Paul D, Doijad SP, Bhute SS, Hingamire TB, Gune RP, Shouche YS.

Stand Genomic Sci. 2017 Jan 30;12:15. doi: 10.1186/s40793-017-0222-x. eCollection 2017.

32.

Description of Auricoccus indicus gen. nov., sp. nov., isolated from skin of human ear.

Prakash O, Muduli S, Kumar R, Kumari C, Nimonkar Y, Shouche YS, Sharma R.

Int J Syst Evol Microbiol. 2017 May;67(5):1212-1218. doi: 10.1099/ijsem.0.001787. Epub 2017 May 30.

PMID:
28086066
33.

Erratum to: Genomic and functional features of the biosurfactant producing Bacillus sp. AM13.

Shaligram S, Kumbhare SV, Dhotre DP, Muddeshwar MG, Kapley A, Joseph N, Purohit HJ, Shouche YS, Pawar SP.

Funct Integr Genomics. 2017 Jan;17(1):119. doi: 10.1007/s10142-016-0528-6. No abstract available.

PMID:
27885507
34.

Microbiome analysis reveals the abundance of bacterial pathogens in Rousettus leschenaultii guano.

Banskar S, Bhute SS, Suryavanshi MV, Punekar S, Shouche YS.

Sci Rep. 2016 Nov 15;6:36948. doi: 10.1038/srep36948.

35.

Limited Bacterial Diversity within a Treatment Plant Receiving Antibiotic-Containing Waste from Bulk Drug Production.

Marathe NP, Shetty SA, Shouche YS, Larsson DG.

PLoS One. 2016 Nov 3;11(11):e0165914. doi: 10.1371/journal.pone.0165914. eCollection 2016.

36.

Neuropilin-1 Is an Important Niche Component and Exerts Context-Dependent Effects on Hematopoietic Stem Cells.

Ghode SS, Bajaj MS, Kulkarni RS, Limaye LS, Shouche YS, Kale VP.

Stem Cells Dev. 2017 Jan 1;26(1):35-48. doi: 10.1089/scd.2016.0096. Epub 2016 Nov 2.

PMID:
27676403
37.

Hyperoxaluria leads to dysbiosis and drives selective enrichment of oxalate metabolizing bacterial species in recurrent kidney stone endures.

Suryavanshi MV, Bhute SS, Jadhav SD, Bhatia MS, Gune RP, Shouche YS.

Sci Rep. 2016 Oct 6;6:34712. doi: 10.1038/srep34712.

38.

Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass-Spectrometry (MALDI-TOF MS) Based Microbial Identifications: Challenges and Scopes for Microbial Ecologists.

Rahi P, Prakash O, Shouche YS.

Front Microbiol. 2016 Aug 30;7:1359. doi: 10.3389/fmicb.2016.01359. eCollection 2016. Review.

39.
40.

Genomic and functional features of the biosurfactant producing Bacillus sp. AM13.

Shaligram S, Kumbhare SV, Dhotre DP, Muddeshwar MG, Kapley A, Joseph N, Purohit HP, Shouche YS, Pawar SP.

Funct Integr Genomics. 2016 Sep;16(5):557-66. doi: 10.1007/s10142-016-0506-z. Epub 2016 Aug 5. Erratum in: Funct Integr Genomics. 2016 Nov 25;:.

PMID:
27492417
41.

Microbial community structure of two freshwater sponges using Illumina MiSeq sequencing revealed high microbial diversity.

Gaikwad S, Shouche YS, Gade WN.

AMB Express. 2016 Dec;6(1):40. doi: 10.1186/s13568-016-0211-2. Epub 2016 Jun 14.

42.

Molecular Characterization and Meta-Analysis of Gut Microbial Communities Illustrate Enrichment of Prevotella and Megasphaera in Indian Subjects.

Bhute S, Pande P, Shetty SA, Shelar R, Mane S, Kumbhare SV, Gawali A, Makhani H, Navandar M, Dhotre D, Lubree H, Agarwal D, Patil R, Ozarkar S, Ghaskadbi S, Yajnik C, Juvekar S, Makharia GK, Shouche YS.

Front Microbiol. 2016 May 9;7:660. doi: 10.3389/fmicb.2016.00660. eCollection 2016.

43.
44.

Comparative analysis of midgut bacterial communities in three aedine mosquito species from dengue-endemic and non-endemic areas of Rajasthan, India.

Charan SS, Pawar KD, Gavhale SD, Tikhe CV, Charan NS, Angel B, Joshi V, Patole MS, Shouche YS.

Med Vet Entomol. 2016 Sep;30(3):264-77. doi: 10.1111/mve.12173. Epub 2016 Apr 20.

PMID:
27094337
45.

Exploration of Microbial Diversity and Community Structure of Lonar Lake: The Only Hypersaline Meteorite Crater Lake within Basalt Rock.

Paul D, Kumbhare SV, Mhatre SS, Chowdhury SP, Shetty SA, Marathe NP, Bhute S, Shouche YS.

Front Microbiol. 2016 Jan 22;6:1553. doi: 10.3389/fmicb.2015.01553. eCollection 2015.

46.

Fungal Planet description sheets: 371-399.

Crous PW, Wingfield MJ, Le Roux JJ, Richardson DM, Strasberg D, Shivas RG, Alvarado P, Edwards J, Moreno G, Sharma R, Sonawane MS, Tan YP, Altés A, Barasubiye T, Barnes CW, Blanchette RA, Boertmann D, Bogo A, Carlavilla JR, Cheewangkoon R, Daniel R, de Beer ZW, de Jesús Yáñez-Morales M, Duong TA, Fernández-Vicente J, Geering AD, Guest DI, Held BW, Heykoop M, Hubka V, Ismail AM, Kajale SC, Khemmuk W, Kolařík M, Kurli R, Lebeuf R, Lévesque CA, Lombard L, Magista D, Manjón JL, Marincowitz S, Mohedano JM, Nováková A, Oberlies NH, Otto EC, Paguigan ND, Pascoe IG, Pérez-Butrón JL, Perrone G, Rahi P, Raja HA, Rintoul T, Sanhueza RM, Scarlett K, Shouche YS, Shuttleworth LA, Taylor PW, Thorn RG, Vawdrey LL, Solano-Vidal R, Voitk A, Wong PT, Wood AR, Zamora JC, Groenewald JZ.

Persoonia. 2015 Dec;35:264-327. doi: 10.3767/003158515X690269. Epub 2015 Dec 4.

47.

Bacterial diversity indicates dietary overlap among bats of different feeding habits.

Banskar S, Mourya DT, Shouche YS.

Microbiol Res. 2016 Jan;182:99-108. doi: 10.1016/j.micres.2015.10.006. Epub 2015 Oct 21.

48.

Quinolone resistance mutations in the faecal microbiota of Swedish travellers to India.

Johnning A, Kristiansson E, Angelin M, Marathe N, Shouche YS, Johansson A, Larsson DG.

BMC Microbiol. 2015 Oct 24;15:235. doi: 10.1186/s12866-015-0574-6.

49.

Taxonomic profiling of bacterial community structure from coastal sediment of Alang-Sosiya shipbreaking yard near Bhavnagar, India.

Patel V, Munot H, Shah V, Shouche YS, Madamwar D.

Mar Pollut Bull. 2015 Dec 30;101(2):736-45. doi: 10.1016/j.marpolbul.2015.10.003. Epub 2015 Oct 23.

PMID:
26475023
50.

Clostridium punense sp. nov., an obligate anaerobe isolated from healthy human faeces.

Lanjekar VB, Marathe NP, Shouche YS, Ranade DR.

Int J Syst Evol Microbiol. 2015 Dec;65(12):4749-56. doi: 10.1099/ijsem.0.000644. Epub 2015 Sep 29.

PMID:
26419229

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