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Items: 7

1.

A Protein Antagonist of Activation-Induced Cytidine Deaminase Encoded by a Complex Mouse Retrovirus.

Singh GB, Byun H, Ali AF, Medina F, Wylie D, Shivram H, Nash AK, Lozano MM, Dudley JP.

MBio. 2019 Aug 13;10(4). pii: e01678-19. doi: 10.1128/mBio.01678-19.

2.

MicroRNAs reinforce repression of PRC2 transcriptional targets independently and through a feed-forward regulatory network.

Shivram H, Le SV, Iyer VR.

Genome Res. 2019 Feb;29(2):184-192. doi: 10.1101/gr.238311.118. Epub 2019 Jan 16.

3.

Identification and removal of sequencing artifacts produced by mispriming during reverse transcription in multiple RNA-seq technologies.

Shivram H, Iyer VR.

RNA. 2018 Sep;24(9):1266-1274. doi: 10.1261/rna.066217.118. Epub 2018 Jun 27.

PMID:
29950518
4.

Bivalent Chromatin Domains in Glioblastoma Reveal a Subtype-Specific Signature of Glioma Stem Cells.

Hall AW, Battenhouse AM, Shivram H, Morris AR, Cowperthwaite MC, Shpak M, Iyer VR.

Cancer Res. 2018 May 15;78(10):2463-2474. doi: 10.1158/0008-5472.CAN-17-1724. Epub 2018 Mar 16.

5.

Synthetic evolutionary origin of a proofreading reverse transcriptase.

Ellefson JW, Gollihar J, Shroff R, Shivram H, Iyer VR, Ellington AD.

Science. 2016 Jun 24;352(6293):1590-3. doi: 10.1126/science.aaf5409.

PMID:
27339990
6.

Chd1 co-localizes with early transcription elongation factors independently of H3K36 methylation and releases stalled RNA polymerase II at introns.

Park D, Shivram H, Iyer VR.

Epigenetics Chromatin. 2014 Oct 27;7(1):32. doi: 10.1186/1756-8935-7-32. eCollection 2014.

7.

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