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Items: 1 to 50 of 135

1.

Author Correction: A practical guide to intelligent image-activated cell sorting.

Isozaki A, Mikami H, Hiramatsu K, Sakuma S, Kasai Y, Iino T, Yamano T, Yasumoto A, Oguchi Y, Suzuki N, Shirasaki Y, Endo T, Ito T, Hiraki K, Yamada M, Matsusaka S, Hayakawa T, Fukuzawa H, Yatomi Y, Arai F, Di Carlo D, Nakagawa A, Hoshino Y, Hosokawa Y, Uemura S, Sugimura T, Ozeki Y, Nitta N, Goda K.

Nat Protoc. 2019 Nov;14(11):3273. doi: 10.1038/s41596-019-0252-5.

PMID:
31624371
2.

A practical guide to intelligent image-activated cell sorting.

Isozaki A, Mikami H, Hiramatsu K, Sakuma S, Kasai Y, Iino T, Yamano T, Yasumoto A, Oguchi Y, Suzuki N, Shirasaki Y, Endo T, Ito T, Hiraki K, Yamada M, Matsusaka S, Hayakawa T, Fukuzawa H, Yatomi Y, Arai F, Di Carlo D, Nakagawa A, Hoshino Y, Hosokawa Y, Uemura S, Sugimura T, Ozeki Y, Nitta N, Goda K.

Nat Protoc. 2019 Aug;14(8):2370-2415. doi: 10.1038/s41596-019-0183-1. Epub 2019 Jul 5. Erratum in: Nat Protoc. 2019 Oct 17;:.

PMID:
31278398
3.

Left Subclavian Artery Revascularization for Delayed Paralysis after Thoracic Endovascular Aortic Repair.

Nakamura E, Nakamura K, Furukawa K, Ishii H, Shirasaki Y, Ichiki N, Higuchi K, Sakurahara D, Hamahiro T.

Ann Vasc Dis. 2019 Jun 25;12(2):233-235. doi: 10.3400/avd.cr.18-00158.

4.

Development of novel methods that monitor necroptosis and the release of DAMPs at the single cell resolution.

Nakano H, Murai S, Yamaguchi Y, Shirasaki Y, Nakabayashi O, Yamazaki S.

Cell Stress. 2019 Jan 22;3(2):66-69. doi: 10.15698/cst2019.02.177.

5.

Extended sandwich technique via the right atrial approach for post-infarction posterior ventricular septal rupture.

Furukawa K, Shirasaki Y, Ishii H, Nakamura E, Nakamura K.

Gen Thorac Cardiovasc Surg. 2019 May 15. doi: 10.1007/s11748-019-01140-4. [Epub ahead of print]

PMID:
31093943
6.

A20 prevents inflammasome-dependent arthritis by inhibiting macrophage necroptosis through its ZnF7 ubiquitin-binding domain.

Polykratis A, Martens A, Eren RO, Shirasaki Y, Yamagishi M, Yamaguchi Y, Uemura S, Miura M, Holzmann B, Kollias G, Armaka M, van Loo G, Pasparakis M.

Nat Cell Biol. 2019 Jun;21(6):731-742. doi: 10.1038/s41556-019-0324-3. Epub 2019 May 13.

PMID:
31086261
7.

Addendum: A FRET biosensor for necroptosis uncovers two different modes of the release of DAMPs.

Murai S, Yamaguchi Y, Shirasaki Y, Yamagishi M, Shindo R, Hildebrand JM, Miura R, Nakabayashi O, Totsuka M, Tomida T, Adachi-Akahane S, Uemura S, Silke J, Yagita H, Miura M, Nakano H.

Nat Commun. 2019 Apr 25;10(1):1923. doi: 10.1038/s41467-019-09536-9.

8.

A FRET biosensor for necroptosis uncovers two different modes of the release of DAMPs.

Murai S, Yamaguchi Y, Shirasaki Y, Yamagishi M, Shindo R, Hildebrand JM, Miura R, Nakabayashi O, Totsuka M, Tomida T, Adachi-Akahane S, Uemura S, Silke J, Yagita H, Miura M, Nakano H.

Nat Commun. 2018 Oct 26;9(1):4457. doi: 10.1038/s41467-018-06985-6.

9.

Apple-Derived Nanoparticles Modulate Expression of Organic-Anion-Transporting Polypeptide (OATP) 2B1 in Caco-2 Cells.

Fujita D, Arai T, Komori H, Shirasaki Y, Wakayama T, Nakanishi T, Tamai I.

Mol Pharm. 2018 Dec 3;15(12):5772-5780. doi: 10.1021/acs.molpharmaceut.8b00921. Epub 2018 Nov 5.

PMID:
30359033
10.

Intelligent Image-Activated Cell Sorting.

Nitta N, Sugimura T, Isozaki A, Mikami H, Hiraki K, Sakuma S, Iino T, Arai F, Endo T, Fujiwaki Y, Fukuzawa H, Hase M, Hayakawa T, Hiramatsu K, Hoshino Y, Inaba M, Ito T, Karakawa H, Kasai Y, Koizumi K, Lee S, Lei C, Li M, Maeno T, Matsusaka S, Murakami D, Nakagawa A, Oguchi Y, Oikawa M, Ota T, Shiba K, Shintaku H, Shirasaki Y, Suga K, Suzuki Y, Suzuki N, Tanaka Y, Tezuka H, Toyokawa C, Yalikun Y, Yamada M, Yamagishi M, Yamano T, Yasumoto A, Yatomi Y, Yazawa M, Di Carlo D, Hosokawa Y, Uemura S, Ozeki Y, Goda K.

Cell. 2018 Sep 20;175(1):266-276.e13. doi: 10.1016/j.cell.2018.08.028. Epub 2018 Aug 27.

11.

Challenges in Developing Protein Secretion Assays at a Single-Cell Level.

Shirasaki Y, Ohara O.

Methods Mol Biol. 2018;1808:1-7. doi: 10.1007/978-1-4939-8567-8_1. Review.

PMID:
29956169
12.

Profiling of N-linked glycans from 100 cells by capillary electrophoresis with large-volume dual preconcentration by isotachophoresis and stacking.

Kawai T, Ota N, Imasato A, Shirasaki Y, Otsuka K, Tanaka Y.

J Chromatogr A. 2018 Aug 31;1565:138-144. doi: 10.1016/j.chroma.2018.06.034. Epub 2018 Jun 23.

PMID:
29945790
13.

Construction of a system using a deep learning algorithm to count cell numbers in nanoliter wells for viable single-cell experiments.

Kamatani T, Fukunaga K, Miyata K, Shirasaki Y, Tanaka J, Baba R, Matsusaka M, Kamatani N, Moro K, Betsuyaku T, Uemura S.

Sci Rep. 2017 Dec 4;7(1):16831. doi: 10.1038/s41598-017-17012-x.

14.

Association of miR-145 With Statin-Induced Skeletal Muscle Toxicity in Human Rhabdomyosarcoma RD Cells.

Saito S, Nakanishi T, Shirasaki Y, Nakajima M, Tamai I.

J Pharm Sci. 2017 Sep;106(9):2873-2880. doi: 10.1016/j.xphs.2017.04.005. Epub 2017 Apr 21.

PMID:
28438533
15.

Aortic Pseudoaneurysm due to Simple Vertebral Compression Fracture Treated with Conservative Management.

Ishii H, Nakamura K, Nakamura E, Endo G, Furukawa K, Shirasaki Y, Mori H.

Ann Vasc Dis. 2016;9(4):349-351. doi: 10.3400/avd.cr.16-00030. Epub 2016 Nov 21.

16.

Water-tunable solvatochromic and nanoaggregate fluorescence: dual colour visualisation and quantification of trace water in tetrahydrofuran.

Tanioka M, Kamino S, Muranaka A, Shirasaki Y, Ooyama Y, Ueda M, Uchiyama M, Enomoto S, Sawada D.

Phys Chem Chem Phys. 2017 Jan 4;19(2):1209-1216. doi: 10.1039/c6cp06808a.

PMID:
27957579
17.

Fused-Fluoran Leuco Dyes with Large Color-Change Derived from Two-Step Equilibrium: iso-Aminobenzopyranoxanthenes.

Shirasaki Y, Okamoto Y, Muranaka A, Kamino S, Sawada D, Hashizume D, Uchiyama M.

J Org Chem. 2016 Dec 2;81(23):12046-12051. Epub 2016 Nov 18.

PMID:
27806194
18.

A study of the properties of chlorine dioxide gas as a fumigant.

Shirasaki Y, Matsuura A, Uekusa M, Ito Y, Hayashi T.

Exp Anim. 2016 Jul 29;65(3):303-10. doi: 10.1538/expanim.15-0092. Epub 2016 Apr 4.

19.

Identification of 2-[2-(4-tert-Butylphenyl)ethyl]-N-[4-(3-cyclopentylpropyl)-2-fluorophenyl]-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide as an Orally Active MGAT2 Inhibitor.

Busujima T, Tanaka H, Iwakiri K, Shirasaki Y, Munetomo E, Saito M, Masuko A, Kitano K, Io F, Kato K, Kamigaso S, Nozoe A, Sato N.

Chem Pharm Bull (Tokyo). 2016;64(3):228-38. doi: 10.1248/cpb.c15-00803.

20.

T2 and Apparent Diffusion Coefficient of MRI Reflect Maturation of Tissue-Engineered Auricular Cartilage Subcutaneously Transplanted in Rats.

Fujihara Y, Nitta N, Misawa M, Hyodo K, Shirasaki Y, Hayashi K, Kosaka R, Homma K, Numano T, Kuribayashi S, Watanabe Y, Sato J, Ohtomo K, Takato T, Hoshi K.

Tissue Eng Part C Methods. 2016 May;22(5):429-38. doi: 10.1089/ten.TEC.2015.0291. Epub 2016 Apr 8.

PMID:
26916676
21.

Characteristic X-ray absorptiometry applied to the assessment of tissue-engineered cartilage development.

Misawa M, Nitta N, Shirasaki Y, Hayashi K, Kosaka R, Hyodo K, Numano T, Homma K, Kuribayashi S, Fujihara Y, Hoshi K.

J Xray Sci Technol. 2015;23(4):489-502. doi: 10.3233/XST-150504.

PMID:
26410660
22.

Identification of 2-[2-(4-tert-butylphenyl)ethyl]-N-(4-fluorophenyl)-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide (29) as an orally available MGAT2 inhibitor.

Busujima T, Tanaka H, Shirasaki Y, Munetomo E, Saito M, Kitano K, Minagawa T, Yoshida K, Osaki N, Sato N.

Bioorg Med Chem. 2015 Sep 1;23(17):5922-31. doi: 10.1016/j.bmc.2015.06.065. Epub 2015 Jul 2.

PMID:
26210160
23.

Reversible near-infrared/blue mechanofluorochromism of aminobenzopyranoxanthene.

Tanioka M, Kamino S, Muranaka A, Ooyama Y, Ota H, Shirasaki Y, Horigome J, Ueda M, Uchiyama M, Sawada D, Enomoto S.

J Am Chem Soc. 2015 May 27;137(20):6436-9. doi: 10.1021/jacs.5b00877. Epub 2015 May 14.

PMID:
25965882
24.

High-performance shortwave-infrared light-emitting devices using core-shell (PbS-CdS) colloidal quantum dots.

Supran GJ, Song KW, Hwang GW, Correa RE, Scherer J, Dauler EA, Shirasaki Y, Bawendi MG, Bulović V.

Adv Mater. 2015 Feb 25;27(8):1437-42. doi: 10.1002/adma.201404636. Epub 2015 Jan 8.

PMID:
25639896
25.

Single-cell imaging of caspase-1 dynamics reveals an all-or-none inflammasome signaling response.

Liu T, Yamaguchi Y, Shirasaki Y, Shikada K, Yamagishi M, Hoshino K, Kaisho T, Takemoto K, Suzuki T, Kuranaga E, Ohara O, Miura M.

Cell Rep. 2014 Aug 21;8(4):974-82. doi: 10.1016/j.celrep.2014.07.012. Epub 2014 Aug 7.

26.

Real-time single-cell imaging of protein secretion.

Shirasaki Y, Yamagishi M, Suzuki N, Izawa K, Nakahara A, Mizuno J, Shoji S, Heike T, Harada Y, Nishikomori R, Ohara O.

Sci Rep. 2014 Apr 22;4:4736. doi: 10.1038/srep04736.

27.

Design and syntheses of highly emissive aminobenzopyrano-xanthene dyes in the visible and far-red regions.

Kamino S, Murakami M, Tanioka M, Shirasaki Y, Watanabe K, Horigome J, Ooyama Y, Enomoto S.

Org Lett. 2014 Jan 3;16(1):258-61. doi: 10.1021/ol403262x. Epub 2013 Dec 10.

PMID:
24320213
28.

Comparison of the effect of edoxaban, a direct factor Xa inhibitor, with a direct thrombin inhibitor, melagatran, and heparin on intracerebral hemorrhage induced by collagenase in rats.

Shirasaki Y, Morishima Y, Shibano T.

Thromb Res. 2014 Apr;133(4):622-8. doi: 10.1016/j.thromres.2013.07.015. Epub 2013 Aug 6.

PMID:
23932349
29.

New aminobenzopyranoxanthene-based colorimetric sensor for copper(II) ions with dual-color signal detection system.

Shirasaki Y, Kamino S, Tanioka M, Watanabe K, Takeuchi Y, Komeda S, Enomoto S.

Chem Asian J. 2013 Nov;8(11):2609-13. doi: 10.1002/asia.201300515. Epub 2013 Jul 10. No abstract available.

PMID:
23843315
30.

Effect of physical restraint on glucose tolerance in cynomolgus monkeys.

Shirasaki Y, Yoshioka N, Kanazawa K, Maekawa T, Horikawa T, Hayashi T.

J Med Primatol. 2013 Jun;42(3):165-8.

PMID:
23802316
31.

Origin of efficiency roll-off in colloidal quantum-dot light-emitting diodes.

Shirasaki Y, Supran GJ, Tisdale WA, Bulović V.

Phys Rev Lett. 2013 May 24;110(21):217403. Epub 2013 May 21.

PMID:
23745932
32.

A red-emissive aminobenzopyrano-xanthene dye: elucidation of fluorescence emission mechanisms in solution and in the aggregate state.

Kamino S, Muranaka A, Murakami M, Tatsumi A, Nagaoka N, Shirasaki Y, Watanabe K, Yoshida K, Horigome J, Komeda S, Uchiyama M, Enomoto S.

Phys Chem Chem Phys. 2013 Feb 14;15(6):2131-40. doi: 10.1039/c2cp43503a. Epub 2013 Jan 4.

PMID:
23288343
33.

Toward an understanding of immune cell sociology: real-time monitoring of cytokine secretion at the single-cell level.

Shirasaki Y, Yamagishi M, Shimura N, Hijikata A, Ohara O.

IUBMB Life. 2013 Jan;65(1):28-34. doi: 10.1002/iub.1110. Review.

34.

Single-molecule tracking of mRNA in living cells.

Yamagishi M, Shirasaki Y, Funatsu T.

Methods Mol Biol. 2013;950:153-67. doi: 10.1007/978-1-62703-137-0_10.

PMID:
23086875
35.

Validation studies on blood collection from the jugular vein of conscious mice.

Shirasaki Y, Ito Y, Kikuchi M, Imamura Y, Hayashi T.

J Am Assoc Lab Anim Sci. 2012 May;51(3):345-51.

36.

CaMKIIδB mediates aberrant NCX1 expression and the imbalance of NCX1/SERCA in transverse aortic constriction-induced failing heart.

Lu YM, Huang J, Shioda N, Fukunaga K, Shirasaki Y, Li XM, Han F.

PLoS One. 2011;6(9):e24724. doi: 10.1371/journal.pone.0024724. Epub 2011 Sep 13.

37.

Electroluminescence from nanoscale materials via field-driven ionization.

Wood V, Panzer MJ, Bozyigit D, Shirasaki Y, Rousseau I, Geyer S, Bawendi MG, Bulović V.

Nano Lett. 2011 Jul 13;11(7):2927-32. doi: 10.1021/nl2013983. Epub 2011 Jun 16.

PMID:
21678932
38.

Integration in a multilayer microfluidic chip of 8 parallel cell sorters with flow control by sol-gel transition of thermoreversible gelation polymer.

Sugino H, Arakawa T, Nara Y, Shirasaki Y, Ozaki K, Shoji S, Funatsu T.

Lab Chip. 2010 Oct 7;10(19):2559-65. doi: 10.1039/c004192k. Epub 2010 Aug 5.

PMID:
20689871
39.

Bromocriptine, an ergot alkaloid, inhibits excitatory amino acid release mediated by glutamate transporter reversal.

Shirasaki Y, Sugimura M, Sato T.

Eur J Pharmacol. 2010 Sep 15;643(1):48-57. doi: 10.1016/j.ejphar.2010.06.007. Epub 2010 Jun 21.

PMID:
20599932
40.

Tracheal defect repair using a PLGA-collagen hybrid scaffold reinforced by a copolymer stent with bFGF-impregnated gelatin hydrogel.

Tatekawa Y, Kawazoe N, Chen G, Shirasaki Y, Komuro H, Kaneko M.

Pediatr Surg Int. 2010 Jun;26(6):575-80. doi: 10.1007/s00383-010-2609-2. Epub 2010 Apr 28.

PMID:
20425118
41.

Use of folded micromachined pillar array column with low-dispersion turns for pressure-driven liquid chromatography.

Aoyama C, Saeki A, Noguchi M, Shirasaki Y, Shoji S, Funatsu T, Mizuno J, Tsunoda M.

Anal Chem. 2010 Feb 15;82(4):1420-6. doi: 10.1021/ac902491x.

PMID:
20092311
42.

Prevalence of gastroduodenal mucosal injury in asymptomatic patients taking antiplatelet agents in Japan.

Yamamoto T, Isono A, Ebato T, Mishina Y, Shirasaki Y, Abe K, Hattori K, Ishii T, Kuyama Y.

Int J Clin Pharmacol Ther. 2009 Dec;47(12):722-5.

PMID:
19954710
44.

Detection of noroviruses in fecal specimens by direct RT-PCR without RNA purification.

Nishimura N, Nakayama H, Yoshizumi S, Miyoshi M, Tonoike H, Shirasaki Y, Kojima K, Ishida S.

J Virol Methods. 2010 Feb;163(2):282-6. doi: 10.1016/j.jviromet.2009.10.011. Epub 2009 Oct 28.

PMID:
19878699
45.

Size-dependent accumulation of mRNA at the leading edge of chicken embryo fibroblasts.

Yamagishi M, Shirasaki Y, Funatsu T.

Biochem Biophys Res Commun. 2009 Dec 18;390(3):750-4. doi: 10.1016/j.bbrc.2009.10.043. Epub 2009 Oct 14.

PMID:
19835844
46.

On-chip microfluidic sorting with fluorescence spectrum detection and multiway separation.

Sugino H, Ozaki K, Shirasaki Y, Arakawa T, Shoji S, Funatsu T.

Lab Chip. 2009 May 7;9(9):1254-60. doi: 10.1039/b815765k. Epub 2009 Feb 13.

PMID:
19370245
47.

Single-molecule imaging of beta-actin mRNAs in the cytoplasm of a living cell.

Yamagishi M, Ishihama Y, Shirasaki Y, Kurama H, Funatsu T.

Exp Cell Res. 2009 Apr 15;315(7):1142-7. doi: 10.1016/j.yexcr.2009.02.009. Epub 2009 Feb 23.

PMID:
19245805
48.

DY-9760e inhibits endothelin-1-induced cardiomyocyte hypertrophy through inhibition of CaMKII and ERK activities.

Lu YM, Shioda N, Han F, Kamata A, Shirasaki Y, Qin ZH, Fukunaga K.

Cardiovasc Ther. 2009 Spring;27(1):17-27. doi: 10.1111/j.1755-5922.2008.00068.x.

PMID:
19207476
49.
50.

Molecular design to enhance the penetration into the retina via ocular instillation.

Shirasaki Y, Takahashi H, Yamaguchi M, Inoue J.

Bioorg Med Chem Lett. 2008 Oct 1;18(19):5174-7. doi: 10.1016/j.bmcl.2008.08.089. Epub 2008 Aug 29.

PMID:
18789863

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