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Autophagy Modulators Profoundly Alter the Astrocyte Cellular Proteome.

Sher AA, Gao A, Coombs KM.

Cells. 2020 Mar 26;9(4). pii: E805. doi: 10.3390/cells9040805.


Mouse transcriptome reveals potential signatures of protection and pathogenesis in human tuberculosis.

Moreira-Teixeira L, Tabone O, Graham CM, Singhania A, Stavropoulos E, Redford PS, Chakravarty P, Priestnall SL, Suarez-Bonnet A, Herbert E, Mayer-Barber KD, Sher A, Fonseca KL, Sousa J, Cá B, Verma R, Haldar P, Saraiva M, O'Garra A.

Nat Immunol. 2020 Apr;21(4):464-476. doi: 10.1038/s41590-020-0610-z. Epub 2020 Mar 16.


Inference of nonlinear receptive field subunits with spike-triggered clustering.

Shah NP, Brackbill N, Rhoades C, Kling A, Goetz G, Litke AM, Sher A, Simoncelli E, Chichilnisky EJ.

Elife. 2020 Mar 9;9. pii: e45743. doi: 10.7554/eLife.45743.


Fatal Adverse Events Associated with Pembrolizumab in Cancer Patients: A Meta-Analysis.

Sher AF, Golshani GM, Wu S.

Cancer Invest. 2020 Feb;38(2):130-138. doi: 10.1080/07357907.2020.1721521. Epub 2020 Feb 5.


Effect of Median Lobe Enlargement on Early Prostatic Artery Embolization Outcomes.

Maron SZ, Sher A, Kim J, Lookstein RA, Rastinehad AR, Fischman A.

J Vasc Interv Radiol. 2020 Mar;31(3):370-377. doi: 10.1016/j.jvir.2019.11.013. Epub 2020 Jan 16.


Potassium Application Improves Grain Yield and Alleviates Drought Susceptibility in Diverse Maize Hybrids.

Ul-Allah S, Ijaz M, Nawaz A, Sattar A, Sher A, Naeem M, Shahzad U, Farooq U, Nawaz F, Mahmood K.

Plants (Basel). 2020 Jan 7;9(1). pii: E75. doi: 10.3390/plants9010075.


Visualizing the Selectivity and Dynamics of Interferon Signaling In Vivo.

Stifter SA, Bhattacharyya N, Sawyer AJ, Cootes TA, Stambas J, Doyle SE, Feigenbaum L, Paul WE, Britton WJ, Sher A, Feng CG.

Cell Rep. 2019 Dec 10;29(11):3539-3550.e4. doi: 10.1016/j.celrep.2019.11.021.


The Colon as a Major Site of Immunoregulation by CD4+ T Cell Subsets in the Steady State.

Sher A, Kelsall BL.

J Immunol. 2019 Oct 1;203(7):1683-1684. doi: 10.4049/jimmunol.1900960. No abstract available.


Multiple genes recruited from hormone pathways partition maize diterpenoid defences.

Ding Y, Murphy KM, Poretsky E, Mafu S, Yang B, Char SN, Christensen SA, Saldivar E, Wu M, Wang Q, Ji L, Schmitz RJ, Kremling KA, Buckler ES, Shen Z, Briggs SP, Bohlmann J, Sher A, Castro-Falcon G, Hughes CC, Huffaker A, Zerbe P, Schmelz EA.

Nat Plants. 2019 Oct;5(10):1043-1056. doi: 10.1038/s41477-019-0509-6. Epub 2019 Sep 16.


Student perceptions of two simulated learning environments in paediatric audiology.

Wilson WJ, Schmulian D, Sher A, Morris S, Hill AE.

Int J Audiol. 2020 Jan;59(1):16-23. doi: 10.1080/14992027.2019.1660004. Epub 2019 Sep 5.


The Magnitude of IFN-γ Responses Is Fine-Tuned by DNA Architecture and the Non-coding Transcript of Ifng-as1.

Petermann F, Pękowska A, Johnson CA, Jankovic D, Shih HY, Jiang K, Hudson WH, Brooks SR, Sun HW, Villarino AV, Yao C, Singleton K, Akondy RS, Kanno Y, Sher A, Casellas R, Ahmed R, O'Shea JJ.

Mol Cell. 2019 Sep 19;75(6):1229-1242.e5. doi: 10.1016/j.molcel.2019.06.025. Epub 2019 Jul 31.


Isolation, characterization, and effect of phosphate-zinc-solubilizing bacterial strains on chickpea (Cicer arietinum L.) growth.

Zaheer A, Malik A, Sher A, Mansoor Qaisrani M, Mehmood A, Ullah Khan S, Ashraf M, Mirza Z, Karim S, Rasool M.

Saudi J Biol Sci. 2019 Jul;26(5):1061-1067. doi: 10.1016/j.sjbs.2019.04.004. Epub 2019 Apr 8.


Impact of sodium caseinate, soy lecithin and carrageenan on functionality of oil-in-water emulsions.

Koo CKW, Chung C, Fu JR, Sher A, Rousset P, McClements DJ.

Food Res Int. 2019 Sep;123:779-789. doi: 10.1016/j.foodres.2019.05.043. Epub 2019 Jun 10.


The Effect of Microbial Endophyte Consortia on Pseudotsuga menziesii and Thuja plicata Survival, Growth, and Physiology Across Edaphic Gradients.

Aghai MM, Khan Z, Joseph MR, Stoda AM, Sher AW, Ettl GJ, Doty SL.

Front Microbiol. 2019 Jun 18;10:1353. doi: 10.3389/fmicb.2019.01353. eCollection 2019.


Transcriptional profiling unveils type I and II interferon networks in blood and tissues across diseases.

Singhania A, Graham CM, Gabryšová L, Moreira-Teixeira L, Stavropoulos E, Pitt JM, Chakravarty P, Warnatsch A, Branchett WJ, Conejero L, Lin JW, Davidson S, Wilson MS, Bancroft G, Langhorne J, Frickel E, Sesay AK, Priestnall SL, Herbert E, Ioannou M, Wang Q, Humphreys IR, Dodd J, Openshaw PJM, Mayer-Barber KD, Jankovic D, Sher A, Lloyd CM, Baldwin N, Chaussabel D, Papayannopoulos V, Wack A, Banchereau JF, Pascual VM, O'Garra A.

Nat Commun. 2019 Jun 28;10(1):2887. doi: 10.1038/s41467-019-10601-6.


Modulation of caseinate-stabilized model oil-in-water emulsions with soy lecithin.

Chung C, Koo CKW, Sher A, Fu JR, Rousset P, McClements DJ.

Food Res Int. 2019 Aug;122:361-370. doi: 10.1016/j.foodres.2019.04.032. Epub 2019 Apr 17.


Unusual Physiological Properties of Smooth Monostratified Ganglion Cell Types in Primate Retina.

Rhoades CE, Shah NP, Manookin MB, Brackbill N, Kling A, Goetz G, Sher A, Litke AM, Chichilnisky EJ.

Neuron. 2019 Aug 21;103(4):658-672.e6. doi: 10.1016/j.neuron.2019.05.036. Epub 2019 Jun 18.


The lectin-specific activity of Toxoplasma gondii microneme proteins 1 and 4 binds Toll-like receptor 2 and 4 N-glycans to regulate innate immune priming.

Sardinha-Silva A, Mendonça-Natividade FC, Pinzan CF, Lopes CD, Costa DL, Jacot D, Fernandes FF, Zorzetto-Fernandes ALV, Gay NJ, Sher A, Jankovic D, Soldati-Favre D, Grigg ME, Roque-Barreira MC.

PLoS Pathog. 2019 Jun 21;15(6):e1007871. doi: 10.1371/journal.ppat.1007871. eCollection 2019 Jun.


Correlation between Disease Severity and the Intestinal Microbiome in Mycobacterium tuberculosis-Infected Rhesus Macaques.

Namasivayam S, Kauffman KD, McCulloch JA, Yuan W, Thovarai V, Mittereder LR, Trinchieri G, Barber DL, Sher A.

mBio. 2019 Jun 4;10(3). pii: e01018-19. doi: 10.1128/mBio.01018-19.


Molecular degree of perturbation of plasma inflammatory markers associated with tuberculosis reveals distinct disease profiles between Indian and Chinese populations.

Oliveira-de-Souza D, Vinhaes CL, Arriaga MB, Kumar NP, Cubillos-Angulo JM, Shi R, Wei W, Yuan X, Zhang G, Cai Y, Barry CE 3rd, Via LE, Sher A, Babu S, Mayer-Barber KD, Nakaya HI, Fukutani KF, Andrade BB.

Sci Rep. 2019 May 29;9(1):8002. doi: 10.1038/s41598-019-44513-8.


Research Progress and Perspective on Drought Stress in Legumes: A Review.

Nadeem M, Li J, Yahya M, Sher A, Ma C, Wang X, Qiu L.

Int J Mol Sci. 2019 May 23;20(10). pii: E2541. doi: 10.3390/ijms20102541. Review.


Author Correction: Differential expression of CXCR3 and CCR6 on CD4+ T-lymphocytes with distinct memory phenotypes characterizes tuberculosis-associated immune reconstitution inflammatory syndrome.

Silveira-Mattos PS, Narendran G, Akrami K, Fukutani KF, Anbalagan S, Nayak K, Subramanyam S, Subramani R, Vinhaes CL, Souza DO, Antonelli LR, Satagopan K, Porter BO, Sher A, Swaminathan S, Sereti I, Andrade BB.

Sci Rep. 2019 May 24;9(1):8036. doi: 10.1038/s41598-019-44429-3.


UVSSA, UBP12, and RDO2/TFIIS Contribute to Arabidopsis UV Tolerance.

Al Khateeb WM, Sher AA, Marcus JM, Schroeder DF.

Front Plant Sci. 2019 Apr 24;10:516. doi: 10.3389/fpls.2019.00516. eCollection 2019.


Sewage waste water application improves the productivity of diverse wheat (Triticum aestivum L.) cultivars on a sandy loam soil.

Ijaz M, Waheed A, Ul-Allah S, Nawaz A, Wasaya A, Sattar A, Sher A.

Environ Sci Pollut Res Int. 2019 Jun;26(17):17045-17054. doi: 10.1007/s11356-019-05061-w. Epub 2019 Apr 17.


Zika Virus Infection Disrupts Astrocytic Proteins Involved in Synapse Control and Axon Guidance.

Sher AA, Glover KKM, Coombs KM.

Front Microbiol. 2019 Mar 26;10:596. doi: 10.3389/fmicb.2019.00596. eCollection 2019.


The roles of apoptosis, autophagy and unfolded protein response in arbovirus, influenza virus, and HIV infections.

Mehrbod P, Ande SR, Alizadeh J, Rahimizadeh S, Shariati A, Malek H, Hashemi M, Glover KKM, Sher AA, Coombs KM, Ghavami S.

Virulence. 2019 Dec;10(1):376-413. doi: 10.1080/21505594.2019.1605803. Review.


A major role for ferroptosis in Mycobacterium tuberculosis-induced cell death and tissue necrosis.

Amaral EP, Costa DL, Namasivayam S, Riteau N, Kamenyeva O, Mittereder L, Mayer-Barber KD, Andrade BB, Sher A.

J Exp Med. 2019 Mar 4;216(3):556-570. doi: 10.1084/jem.20181776. Epub 2019 Feb 20.


Differential expression of CXCR3 and CCR6 on CD4+ T-lymphocytes with distinct memory phenotypes characterizes tuberculosis-associated immune reconstitution inflammatory syndrome.

Silveira-Mattos PS, Narendran G, Akrami K, Fukutani KF, Anbalagan S, Nayak K, Subramanyam S, Subramani R, Vinhaes CL, Souza DO, Antonelli LR, Satagopan K, Porter BO, Sher A, Swaminathan S, Sereti I, Andrade BB.

Sci Rep. 2019 Feb 6;9(1):1502. doi: 10.1038/s41598-018-37846-3. Erratum in: Sci Rep. 2019 May 24;9(1):8036.


Combined application of biochar and PGPR consortia for sustainable production of wheat under semiarid conditions with a reduced dose of synthetic fertilizer.

Ijaz M, Tahir M, Shahid M, Ul-Allah S, Sattar A, Sher A, Mahmood K, Hussain M.

Braz J Microbiol. 2019 Apr;50(2):449-458. doi: 10.1007/s42770-019-00043-z. Epub 2019 Jan 23.


Epiretinal stimulation with local returns enhances selectivity at cellular resolution.

Fan VH, Grosberg LE, Madugula SS, Hottowy P, Dabrowski W, Sher A, Litke AM, Chichilnisky EJ.

J Neural Eng. 2019 Apr;16(2):025001. doi: 10.1088/1741-2552/aaeef1. Epub 2018 Nov 7.


Predicting critical drug concentrations and torsadogenic risk using a multiscale exposure-response simulator.

Sahli Costabal F, Yao J, Sher A, Kuhl E.

Prog Biophys Mol Biol. 2019 Jul;144:61-76. doi: 10.1016/j.pbiomolbio.2018.10.003. Epub 2018 Oct 26.


Quantitative Systems Pharmacology: Modelling and simulating drug action in health and disease.

Niederer S, Sher A.

Prog Biophys Mol Biol. 2018 Nov;139:1-2. doi: 10.1016/j.pbiomolbio.2018.11.004. No abstract available.


Void Hole Avoidance for Reliable Data Delivery in IoT Enabled Underwater Wireless Sensor Networks.

Sher A, Khan A, Javaid N, Ahmed SH, Aalsalem MY, Khan WZ.

Sensors (Basel). 2018 Sep 28;18(10). pii: E3271. doi: 10.3390/s18103271.


Characterization of the Effect of Increased Plant Density on Canopy Morphology and Stalk Lodging Risk.

Sher A, Khan A, Ashraf U, Liu HH, Li JC.

Front Plant Sci. 2018 Sep 11;9:1047. doi: 10.3389/fpls.2018.01047. eCollection 2018.


Transient T-bet expression functionally specifies a distinct T follicular helper subset.

Fang D, Cui K, Mao K, Hu G, Li R, Zheng M, Riteau N, Reiner SL, Sher A, Zhao K, Zhu J.

J Exp Med. 2018 Nov 5;215(11):2705-2714. doi: 10.1084/jem.20180927. Epub 2018 Sep 19.


The Microbiome and Tuberculosis: Early Evidence for Cross Talk.

Namasivayam S, Sher A, Glickman MS, Wipperman MF.

mBio. 2018 Sep 18;9(5). pii: e01420-18. doi: 10.1128/mBio.01420-18. Review.


Avoiding Void Holes and Collisions with Reliable and Interference-Aware Routing in Underwater WSNs.

Javaid N, Majid A, Sher A, Khan WZ, Aalsalem MY.

Sensors (Basel). 2018 Sep 11;18(9). pii: E3038. doi: 10.3390/s18093038.


Host resistance to pulmonary Mycobacterium tuberculosis infection requires CD153 expression.

Sallin MA, Kauffman KD, Riou C, Du Bruyn E, Foreman TW, Sakai S, Hoft SG, Myers TG, Gardina PJ, Sher A, Moore R, Wilder-Kofie T, Moore IN, Sette A, Lindestam Arlehamn CS, Wilkinson RJ, Barber DL.

Nat Microbiol. 2018 Nov;3(11):1198-1205. doi: 10.1038/s41564-018-0231-6. Epub 2018 Sep 10.


Subclinical Hypothyroidism among local adult obese population.

Sami A, Iftekhar MF, Rauf MA, Sher A.

Pak J Med Sci. 2018 Jul-Aug;34(4):980-983. doi: 10.12669/pjms.344.14127.


Lysosomal Cathepsin Release Is Required for NLRP3-Inflammasome Activation by Mycobacterium tuberculosis in Infected Macrophages.

Amaral EP, Riteau N, Moayeri M, Maier N, Mayer-Barber KD, Pereira RM, Lage SL, Kubler A, Bishai WR, D'Império-Lima MR, Sher A, Andrade BB.

Front Immunol. 2018 Jun 21;9:1427. doi: 10.3389/fimmu.2018.01427. eCollection 2018.


TAPP Adaptors Control B Cell Metabolism by Modulating the Phosphatidylinositol 3-Kinase Signaling Pathway: A Novel Regulatory Circuit Preventing Autoimmunity.

Jayachandran N, Mejia EM, Sheikholeslami K, Sher AA, Hou S, Hatch GM, Marshall AJ.

J Immunol. 2018 Jul 15;201(2):406-416. doi: 10.4049/jimmunol.1701440. Epub 2018 Jun 8.


Stereotyped Synaptic Connectivity Is Restored during Circuit Repair in the Adult Mammalian Retina.

Beier C, Palanker D, Sher A.

Curr Biol. 2018 Jun 4;28(11):1818-1824.e2. doi: 10.1016/j.cub.2018.04.063. Epub 2018 May 24.


Regeneration of Salicaceae riparian forests in the Northern Hemisphere: A new framework and management tool.

González E, Martínez-Fernández V, Shafroth PB, Sher AA, Henry AL, Garófano-Gómez V, Corenblit D.

J Environ Manage. 2018 Jul 15;218:374-387. doi: 10.1016/j.jenvman.2018.04.069. Epub 2018 Apr 25. Review.


Type I interferons in tuberculosis: Foe and occasionally friend.

Moreira-Teixeira L, Mayer-Barber K, Sher A, O'Garra A.

J Exp Med. 2018 May 7;215(5):1273-1285. doi: 10.1084/jem.20180325. Epub 2018 Apr 17. Review.


Evaluation of Virtual Monoenergetic Images on Pulmonary Vasculature Using the Dual-Layer Detector-Based Spectral Computed Tomography.

Ghandour A, Sher A, Rassouli N, Dhanantwari A, Rajiah P.

J Comput Assist Tomogr. 2018 Nov/Dec;42(6):858-865. doi: 10.1097/RCT.0000000000000748.


Outcomes of using endovascular aneurysm repair with active fixation in complex aneurysm morphology.

Tadros RO, Sher A, Kang M, Vouyouka A, Ting W, Han D, Marin M, Faries P.

J Vasc Surg. 2018 Sep;68(3):683-692. doi: 10.1016/j.jvs.2017.12.039. Epub 2018 Mar 13.


Spasticity or periodic limb movements? Lessons from a not-uncommon case report.

Levy J, Lansaman T, Frémondière F, Ferrapie AL, Sher A, Dinomais M, Bensmail D.

Ann Phys Rehabil Med. 2019 Nov;62(6):453-456. doi: 10.1016/ Epub 2018 Mar 7. No abstract available.


Foreign antigen-independent memory-phenotype CD4+ T cells: a new player in innate immunity?

Kawabe T, Zhu J, Sher A.

Nat Rev Immunol. 2018 Feb 26;18(3):1. doi: 10.1038/nri.2018.12. No abstract available.


Temporal structure in spiking patterns of ganglion cells defines perceptual thresholds in rodents with subretinal prosthesis.

Ho E, Lorach H, Goetz G, Laszlo F, Lei X, Kamins T, Mariani JC, Sher A, Palanker D.

Sci Rep. 2018 Feb 16;8(1):3145. doi: 10.1038/s41598-018-21447-1.


Ridge sowing of sunflower (Helianthus annuus L.) in a minimum till system improves the productivity, oil quality, and profitability on a sandy loam soil under an arid climate.

Sher A, Suleman M, Qayyum A, Sattar A, Wasaya A, Ijaz M, Nawaz A.

Environ Sci Pollut Res Int. 2018 Apr;25(12):11905-11912. doi: 10.1007/s11356-018-1336-4. Epub 2018 Feb 14.


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