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Mood disorders and increased risk of non-communicable disease in adults with HIV.

Castilho JL, Rebeiro PF, Shepherd BE, Nash R, Adams RS, Turner M, Furukawa SS, Hulgan T, Koethe JR, Sterling TR.

J Acquir Immune Defic Syndr. 2020 Jan 3. doi: 10.1097/QAI.0000000000002269. [Epub ahead of print]


The impact of data quality and source data verification on epidemiologic inference: a practical application using HIV observational data.

Giganti MJ, Shepherd BE, Caro-Vega Y, Luz PM, Rebeiro PF, Maia M, Julmiste G, Cortes C, McGowan CC, Duda SN.

BMC Public Health. 2019 Dec 30;19(1):1748. doi: 10.1186/s12889-019-8105-2.


Temporal changes in ART initiation in adults with high CD4 counts in Latin America: a cohort study.

Crabtree-Ramírez BE, Caro-Vega Y, Belaunzarán-Zamudio PF, Shepherd BE, Rebeiro PF, Veloso V, Cortes CP, Padgett D, Gotuzzo E, Sierra-Madero J, McGowan CC, Person AK; Caribbean, Central, South America Network for HIV Epidemiology (CCASAnet).

J Int AIDS Soc. 2019 Dec;22(12):e25413. doi: 10.1002/jia2.25413.


Directly observed therapy and risk of unfavourable tuberculosis treatment outcomes among an international cohort of people living with HIV in low- and middle-income countries.

Pettit AC, Jenkins CA, Blevins Peratikos M, Yotebieng M, Diero L, Do CD, Ross J, Veloso VG, Hawerlander D, Marcy O, Shepherd BE, Fenner L, Sterling TR; International Epidemiology Databases to Evaluate AIDS (IeDEA) Consortium.

J Int AIDS Soc. 2019 Dec;22(12):e25423. doi: 10.1002/jia2.25423.


An empirical comparison of two novel transformation models.

Tian Y, Hothorn T, Li C, Harrell FE Jr, Shepherd BE.

Stat Med. 2019 Dec 6. doi: 10.1002/sim.8425. [Epub ahead of print]


Clinic-Level Factors Associated with Retention in Care among People Living with HIV in a Multi-Site United States Cohort, 2010-2016.

Oliver CD, Rebeiro PF, Shepherd BE, Keruly J, Mayer KH, Mathews WC, Turan B, Moore RD, Crane HM, Geng E, Napravnik S, Kitahata MM, Mugavero MJ, Pettit AC; Centers for AIDS Research Network of Integrated Clinical Systems.

Clin Infect Dis. 2019 Nov 23. pii: ciz1144. doi: 10.1093/cid/ciz1144. [Epub ahead of print]


The Population Impact of Late Presentation with Advanced HIV Disease and Delayed Antiretroviral Therapy in Adults Receiving HIV Care in Latin America.

Belaunzarán-Zamudio PF, Caro-Vega YN, Shepherd BE, Rebeiro PF, Crabtree-Ramírez BE, Cortes CP, Grinsztejn B, Gotuzzo E, Mejia F, Padgett D, Pape JW, Rouzier V, Veloso V, Cardoso SW, McGowan CC, Sierra-Madero JG.

Am J Epidemiol. 2019 Oct 29. pii: kwz252. doi: 10.1093/aje/kwz252. [Epub ahead of print]


Increased Mortality after Tuberculosis Treatment Completion in Persons with HIV in Latin America.

Koenig SP, Kim A, Shepherd BE, Cesar C, Veloso V, Cortes CP, Padgett D, Crabtree-Ramírez B, Gotuzzo E, McGowan CC, Sterling TR, Pape JW; Caribbean, Central and South America Network for HIV Epidemiology (CCASAnet).

Clin Infect Dis. 2019 Oct 20. pii: ciz1032. doi: 10.1093/cid/ciz1032. [Epub ahead of print]


Predicting the long-term impact of voluntary medical male circumcision on HIV incidence among men who have sex with men in Beijing, China.

Zhang C, Webb GF, Lou J, Shepherd BE, Qian HZ, Liu Y, Vermund SH.

AIDS Care. 2020 Mar;32(3):343-353. doi: 10.1080/09540121.2019.1679704. Epub 2019 Oct 16.


CD4/CD8 Ratio and CD4 Nadir Predict Mortality Following Noncommunicable Disease Diagnosis in Adults Living with HIV.

Castilho JL, Turner M, Shepherd BE, Koethe JR, Furukawa SS, Bofill CE, Raffanti S, Sterling TR.

AIDS Res Hum Retroviruses. 2019 Oct;35(10):960-967. doi: 10.1089/AID.2019.0064. Epub 2019 Sep 17.


Trends and Disparities in Mortality and Progression to AIDS in the Highly Active Antiretroviral Therapy Era: Tennessee, 1996-2016.

Rebeiro PF, Pettit AC, Sizemore L, Mathieson SA, Wester C, Kipp A, Shepherd BE, Sterling TR.

Am J Public Health. 2019 Sep;109(9):1266-1272. doi: 10.2105/AJPH.2019.305180. Epub 2019 Jul 18.


Optimal management of HIV- positive adults at risk for kidney disease in Nigeria (Renal Risk Reduction "R3" Trial): protocol and study design.

Aliyu MH, Wudil UJ, Ingles DJ, Shepherd BE, Gong W, Musa BM, Muhammad H, Sani MU, Abdu A, Nalado AM, Atanda A, Ahonkhai AA, Ikizler TA, Winkler CA, Kopp JB, Kimmel PL, Wester CW.

Trials. 2019 Jun 10;20(1):341. doi: 10.1186/s13063-019-3436-y.


HIV-related tuberculosis: mortality risk in persons without vs. with culture-confirmed disease.

Crabtree-Ramírez B, Jenkins C, Jayathilake K, Carriquiry G, Veloso V, Padgett D, Gotuzzo E, Cortes C, Mejia F, McGowan CC, Duda S, Shepherd BE, Sterling TR.

Int J Tuberc Lung Dis. 2019 Mar 1;23(3):306-314. doi: 10.5588/ijtld.18.0111.


Self-reported Cannabis Use and Changes in Body Mass Index, CD4 T-Cell Counts, and HIV-1 RNA Suppression in Treated Persons with HIV.

Lee JT, Saag LA, Kipp AM, Logan J, Shepherd BE, Koethe JR, Turner M, Bebawy S, Sterling TR, Hulgan T.

AIDS Behav. 2019 Feb 18. doi: 10.1007/s10461-019-02430-x. [Epub ahead of print]


Treatment of drug-susceptible tuberculosis among people living with human immunodeficiency virus infection: an update.

Pettit AC, Shepherd BE, Sterling TR.

Curr Opin HIV AIDS. 2018 Nov;13(6):469-477. doi: 10.1097/COH.0000000000000506. Review.


Early Retention in Care Neither Mediates Nor Modifies the Effect of Sex and Sexual Mode of HIV Acquisition on HIV Survival in the Americas.

Coelho L, Rebeiro PF, Castilho JL, Caro-Vega Y, Mejia FA, Cesar C, Cortes CP, Padgett D, McGowan CC, Veloso VG, Sterling TR, Grinsztejn B, Shepherd BE, Luz PM.

AIDS Patient Care STDS. 2018 Aug;32(8):306-313. doi: 10.1089/apc.2018.0028. Erratum in: AIDS Patient Care STDS. 2018 Sep 1;32(9):379.


Older age at first tuberculosis diagnosis is associated with tuberculosis recurrence in HIV-negative persons.

van der Heijden YF, Karim F, Chinappa T, Mufamadi G, Zako L, Shepherd BE, Maruri F, Moosa MS, Sterling TR, Pym AS.

Int J Tuberc Lung Dis. 2018 Aug 1;22(8):871-877. doi: 10.5588/ijtld.17.0766.


Partners-based HIV treatment for seroconcordant couples attending antenatal and postnatal care in rural Mozambique: A cluster randomized trial protocol.

Audet CM, Graves E, Barreto E, De Schacht C, Gong W, Shepherd BE, Aboobacar A, Gonzalez-Calvo L, Alvim MF, Aliyu MH, Kipp AM, Jordan H, Amico KR, Diemer M, Ciaranello A, Dugdale C, Vermund SH, Van Rompaey S.

Contemp Clin Trials. 2018 Aug;71:63-69. doi: 10.1016/j.cct.2018.05.020. Epub 2018 Jun 5.


Multi-Donor Longitudinal Antibody Repertoire Sequencing Reveals the Existence of Public Antibody Clonotypes in HIV-1 Infection.

Setliff I, McDonnell WJ, Raju N, Bombardi RG, Murji AA, Scheepers C, Ziki R, Mynhardt C, Shepherd BE, Mamchak AA, Garrett N, Karim SA, Mallal SA, Crowe JE Jr, Morris L, Georgiev IS.

Cell Host Microbe. 2018 Jun 13;23(6):845-854.e6. doi: 10.1016/j.chom.2018.05.001. Epub 2018 May 31.


Trends in proportion of older HIV-infected people in care in Latin America and the Caribbean: a growing challenge.

Caro-Vega Y, Belaunzarán-Zamudio PF, Crabtree-Ramírez B, Shepherd BE, Mejia F, Giganti MJ, Patterson P, Grinsztejn B, Wolff M, Pape JW, Padgett D, Castilho JL, McGowan C, Sierra-Madero JG.

Epidemiol Infect. 2018 Jul;146(10):1308-1311. doi: 10.1017/S0950268818001346. Epub 2018 May 30.


Brief Report: Circulating Markers of Immunologic Activity Reflect Adiposity in Persons With HIV on Antiretroviral Therapy.

Koethe JR, Jenkins CA, Furch BD, Lake JE, Barnett L, Hager CC, Smith R, Hulgan T, Shepherd BE, Kalams SA.

J Acquir Immune Defic Syndr. 2018 Sep 1;79(1):135-140. doi: 10.1097/QAI.0000000000001768.


Survival after cancer diagnosis in a cohort of HIV-positive individuals in Latin America.

Fink VI, Jenkins CA, Castilho JL, Person AK, Shepherd BE, Grinsztejn B, Netto J, Crabtree-Ramirez B, Cortés CP, Padgett D, Jayathilake K, McGowan C, Cahn P; CCASAnet.

Infect Agent Cancer. 2018 May 8;13:16. doi: 10.1186/s13027-018-0188-3. eCollection 2018.


Lower Concentrations of Circulating Medium and Long-Chain Acylcarnitines Characterize Insulin Resistance in Persons with HIV.

Bailin SS, Jenkins CA, Petucci C, Culver JA, Shepherd BE, Fessel JP, Hulgan T, Koethe JR.

AIDS Res Hum Retroviruses. 2018 Jun;34(6):536-543. doi: 10.1089/AID.2017.0314. Epub 2018 May 2.


Virologic failure and mortality in older ART initiators in a multisite Latin American and Caribbean Cohort.

Carriquiry G, Giganti MJ, Castilho JL, Jayathilake K, Cahn P, Grinsztejn B, Cortes C, Pape JW, Padgett D, Sierra-Madero J, McGowan CC, Shepherd BE, Gotuzzo E.

J Int AIDS Soc. 2018 Mar;21(3):e25088. doi: 10.1002/jia2.25088.


Is substance use associated with HIV cascade outcomes in Latin America?

De Boni RB, Peratikos MB, Shepherd BE, Grinsztejn B, Cortés C, Padgett D, Gotuzzo E, Belaunzarán-Zamudio PF, Rebeiro PF, Duda SN, McGowan CC; for CCASAnet.

PLoS One. 2018 Mar 15;13(3):e0194228. doi: 10.1371/journal.pone.0194228. eCollection 2018.


Durability of Efavirenz Compared With Boosted Protease Inhibitor-Based Regimens in Antiretroviral-Naïve Patients in the Caribbean and Central and South America.

Caro-Vega Y, Belaunzarán-Zamudio PF, Crabtree-Ramírez BE, Shepherd BE, Grinsztejn B, Wolff M, Pape JW, Padgett D, Gotuzzo E, McGowan CC, Sierra-Madero JG.

Open Forum Infect Dis. 2018 Mar 2;5(3):ofy004. doi: 10.1093/ofid/ofy004. eCollection 2018 Mar.


Peer counselling versus standard-of-care on reducing high-risk behaviours among newly diagnosed HIV-positive men who have sex with men in Beijing, China: a randomized intervention study.

Liu Y, Vermund SH, Ruan Y, Liu H, Rivet Amico K, Simoni JM, Shepherd BE, Shao Y, Qian HZ.

J Int AIDS Soc. 2018 Feb;21(2). doi: 10.1002/jia2.25079.


Increased non-AIDS mortality among persons with AIDS-defining events after antiretroviral therapy initiation.

Pettit AC, Giganti MJ, Ingle SM, May MT, Shepherd BE, Gill MJ, Fätkenheuer G, Abgrall S, Saag MS, Del Amo J, Justice AC, Miro JM, Cavasinni M, Dabis F, Monforte AD, Reiss P, Guest J, Moore D, Shepherd L, Obel N, Crane HM, Smith C, Teira R, Zangerle R, Sterne JA, Sterling TR; Antiretroviral Therapy Cohort Collaboration (ART-CC) investigators.

J Int AIDS Soc. 2018 Jan;21(1). doi: 10.1002/jia2.25031.


Considerations for analysis of time-to-event outcomes measured with error: Bias and correction with SIMEX.

Oh EJ, Shepherd BE, Lumley T, Shaw PA.

Stat Med. 2018 Apr 15;37(8):1276-1289. doi: 10.1002/sim.7554. Epub 2017 Nov 29.


Covariate-adjusted Spearman's rank correlation with probability-scale residuals.

Liu Q, Li C, Wanga V, Shepherd BE.

Biometrics. 2018 Jun;74(2):595-605. doi: 10.1111/biom.12812. Epub 2017 Nov 13.


Modeling continuous response variables using ordinal regression.

Liu Q, Shepherd BE, Li C, Harrell FE Jr.

Stat Med. 2017 Nov 30;36(27):4316-4335. doi: 10.1002/sim.7433. Epub 2017 Sep 5.


A Pragmatic Approach for Reproducible Research With Sensitive Data.

Shepherd BE, Blevins Peratikos M, Rebeiro PF, Duda SN, McGowan CC.

Am J Epidemiol. 2017 Aug 15;186(4):387-392. doi: 10.1093/aje/kwx066.


Outcomes of HIV-positive patients with cryptococcal meningitis in the Americas.

Crabtree Ramírez B, Caro Vega Y, Shepherd BE, Le C, Turner M, Frola C, Grinsztejn B, Cortes C, Padgett D, Sterling TR, McGowan CC, Person A.

Int J Infect Dis. 2017 Oct;63:57-63. doi: 10.1016/j.ijid.2017.08.004. Epub 2017 Aug 12.


A decade of HAART in Latin America: Long term outcomes among the first wave of HIV patients to receive combination therapy.

Wolff MJ, Giganti MJ, Cortes CP, Cahn P, Grinsztejn B, Pape JW, Padgett D, Sierra-Madero J, Gotuzzo E, Duda SN, McGowan CC, Shepherd BE; Caribbean, Central and South America Network for HIV Epidemiology.

PLoS One. 2017 Jun 26;12(6):e0179769. doi: 10.1371/journal.pone.0179769. eCollection 2017.


Isoniazid-monoresistant tuberculosis is associated with poor treatment outcomes in Durban, South Africa.

van der Heijden YF, Karim F, Mufamadi G, Zako L, Chinappa T, Shepherd BE, Maruri F, Moosa MS, Sterling TR, Pym AS.

Int J Tuberc Lung Dis. 2017 Jun 1;21(6):670-676. doi: 10.5588/ijtld.16.0843.


Probability-scale residuals for continuous, discrete, and censored data.

Shepherd BE, Li C, Liu Q.

Can J Stat. 2016 Dec;44(4):463-479. doi: 10.1002/cjs.11302. Epub 2016 Aug 24.


All-cause mortality in HIV-positive adults starting combination antiretroviral therapy: correcting for loss to follow-up.

Anderegg N, Johnson LF, Zaniewski E, Althoff KN, Balestre E, Law M, Nash D, Shepherd BE, Yiannoutsos CT, Egger M; IeDEA, MeSH consortia.

AIDS. 2017 Apr;31 Suppl 1:S31-S40. doi: 10.1097/QAD.0000000000001321.


Discussion of 'Regularized Regression for Categorical Data'.

Shepherd BE, Liu Q.

Stat Modelling. 2016 Jun;16(3):238-248. Epub 2016 Jun 27. No abstract available.


Daily Marijuana Use is Associated with Missed Clinic Appointments Among HIV-Infected Persons Engaged in HIV Care.

Kipp AM, Rebeiro PF, Shepherd BE, Brinkley-Rubinstein L, Turner M, Bebawy S, Sterling TR, Hulgan T.

AIDS Behav. 2017 Jul;21(7):1996-2004. doi: 10.1007/s10461-017-1716-7.


Impact of Depression and Anxiety on Initiation of Antiretroviral Therapy Among Men Who Have Sex with Men with Newly Diagnosed HIV Infections in China.

Tao J, Vermund SH, Lu H, Ruan Y, Shepherd BE, Kipp AM, Amico KR, Zhang X, Shao Y, Qian HZ.

AIDS Patient Care STDS. 2017 Feb;31(2):96-104. doi: 10.1089/apc.2016.0214.


The 2013 HIV Continuum of Care in Tennessee: Progress Made, but Disparities Persist.

Wester C, Rebeiro PF, Shavor TJ, Shepherd BE, McGoy SL, Daley B, Morrison M, Vermund SH, Pettit AC.

Public Health Rep. 2016 Sep;131(5):695-703. doi: 10.1177/0033354916660082. Epub 2016 Aug 3.


Mortality in Children with Human Immunodeficiency Virus Initiating Treatment: A Six-Cohort Study in Latin America.

Luque MT, Jenkins CA, Shepherd BE, Padgett D, Rouzier V, Succi RCM, Machado DM, McGowan CC, Vermund SH, Pinto JA.

J Pediatr. 2017 Mar;182:245-252.e1. doi: 10.1016/j.jpeds.2016.12.034. Epub 2017 Jan 9.


Brief Report: Assessing and Interpreting the Association Between Continuous Covariates and Outcomes in Observational Studies of HIV Using Splines.

Shepherd BE, Rebeiro PF; Caribbean, Central and South America network for HIV epidemiology.

J Acquir Immune Defic Syndr. 2017 Mar 1;74(3):e60-e63. doi: 10.1097/QAI.0000000000001221.


Substance Use and Adherence Among People Living with HIV/AIDS Receiving cART in Latin America.

De Boni RB, Shepherd BE, Grinsztejn B, Cesar C, Cortés C, Padgett D, Gotuzzo E, Belaunzarán-Zamudio PF, Rebeiro PF, Duda SN, McGowan CC.

AIDS Behav. 2016 Nov;20(11):2692-2699.


Effects of depression and anxiety on antiretroviral therapy adherence among newly diagnosed HIV-infected Chinese MSM.

Tao J, Qian HZ, Kipp AM, Ruan Y, Shepherd BE, Amico KR, Shao Y, Lu H, Vermund SH.

AIDS. 2017 Jan 28;31(3):401-406. doi: 10.1097/QAD.0000000000001287.


Time to HAART Initiation after Diagnosis and Treatment of Opportunistic Infections in Patients with AIDS in Latin America.

Crabtree-Ramírez B, Caro-Vega Y, Shepherd BE, Grinsztejn B, Wolff M, Cortes CP, Padgett D, Carriquiry G, Fink V, Jayathilake K, Person AK, McGowan C, Sierra-Madero J; Caribbean, Central and South America Network for HIV Epidemiology (CCASAnet), of the International Epidemiologic Databases to Evaluate AIDS (IeDEA) Program.

PLoS One. 2016 Jun 7;11(6):e0153921. doi: 10.1371/journal.pone.0153921. eCollection 2016.


Comparing results from multiple imputation and dynamic marginal structural models for estimating when to start antiretroviral therapy.

Shepherd BE, Liu Q, Mercaldo N, Jenkins CA, Lau B, Cole SR, Saag MS, Sterling TR.

Stat Med. 2016 Oct 30;35(24):4335-4351. doi: 10.1002/sim.7007. Epub 2016 Jun 6.


Superior Glucose Tolerance and Metabolomic Profiles, Independent of Adiposity, in HIV-Infected Women Compared With Men on Antiretroviral Therapy.

Koethe JR, Jenkins CA, Petucci C, Culver J, Shepherd BE, Sterling TR.

Medicine (Baltimore). 2016 May;95(19):e3634. doi: 10.1097/MD.0000000000003634.


Integrated prevention of mother-to-child HIV transmission services, antiretroviral therapy initiation, and maternal and infant retention in care in rural north-central Nigeria: a cluster-randomised controlled trial.

Aliyu MH, Blevins M, Audet CM, Kalish M, Gebi UI, Onwujekwe O, Lindegren ML, Shepherd BE, Wester CW, Vermund SH.

Lancet HIV. 2016 May;3(5):e202-11. doi: 10.1016/S2352-3018(16)00018-7. Epub 2016 Feb 24.


Higher Time-Updated Body Mass Index: Association With Improved CD4+ Cell Recovery on HIV Treatment.

Koethe JR, Jenkins CA, Lau B, Shepherd BE, Wester W, Rebeiro PF, Silverberg MJ, Thorne JE, Gill J, Mayor AM, Willig A, Bosch R, Horberg MA, Justice AC, Sterling TR, Moore RD; North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD).

J Acquir Immune Defic Syndr. 2016 Oct 1;73(2):197-204. doi: 10.1097/QAI.0000000000001035.

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