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The ROS-Mitophagy Signalling Pathway Regulates Liver Endothelial Cell Survival during Ischaemia-Reperfusion Injury.

Bhogal RH, Weston CJ, Velduis S, Leuvenink HGD, Reynolds GM, Davies S, Thin LN, Alfaifi M, Shepard E, Boteon Y, Wallace L, Oo Y, Adams DH, Mirza DF, Mergental H, Muirhead G, Stephenson BF, Afford SC.

Liver Transpl. 2018 Jul 24. doi: 10.1002/lt.25313. [Epub ahead of print]


Compositional and structural insights into the nature of the H-cluster precursor on HydF.

Scott AG, Szilagyi RK, Mulder DW, Ratzloff MW, Byer AS, King PW, Broderick WE, Shepard EM, Broderick JB.

Dalton Trans. 2018 Jul 17;47(28):9521-9535. doi: 10.1039/c8dt01654b.


Paradigm Shift for Radical S-Adenosyl-l-methionine Reactions: The Organometallic Intermediate Ω Is Central to Catalysis.

Byer AS, Yang H, McDaniel EC, Kathiresan V, Impano S, Pagnier A, Watts H, Denler C, Vagstad AL, Piel J, Duschene KS, Shepard EM, Shields TP, Scott LG, Lilla EA, Yokoyama K, Broderick WE, Hoffman BM, Broderick JB.

J Am Chem Soc. 2018 Jul 18;140(28):8634-8638. doi: 10.1021/jacs.8b04061. Epub 2018 Jul 6.


Multi-dimensional Precision Livestock Farming: a potential toolbox for sustainable rangeland management.

di Virgilio A, Morales JM, Lambertucci SA, Shepard ELC, Wilson RP.

PeerJ. 2018 May 30;6:e4867. doi: 10.7717/peerj.4867. eCollection 2018.


The Ornithodolite as a tool to quantify animal space use and habitat selection; a case study with birds diving in tidal waters.

Cole EL, Waggitt JJ, Hedenstrom A, Piano M, Holton MD, Börger L, Shepard ELC.

Integr Zool. 2018 May 31. doi: 10.1111/1749-4877.12327. [Epub ahead of print]


Diagnostic odyssey of patients with mitochondrial disease: Results of a survey.

Grier J, Hirano M, Karaa A, Shepard E, Thompson JLP.

Neurol Genet. 2018 Mar 26;4(2):e230. doi: 10.1212/NXG.0000000000000230. eCollection 2018 Apr.


Decarboxylation involving a ferryl, propionate, and a tyrosyl group in a radical relay yields heme b.

Streit BR, Celis AI, Moraski GC, Shisler KA, Shepard EM, Rodgers KR, Lukat-Rodgers GS, DuBois JL.

J Biol Chem. 2018 Mar 16;293(11):3989-3999. doi: 10.1074/jbc.RA117.000830. Epub 2018 Feb 2.


Extreme behavioural shifts by baboons exploiting risky, resource-rich, human-modified environments.

Fehlmann G, O'Riain MJ, Kerr-Smith C, Hailes S, Luckman A, Shepard ELC, King AJ.

Sci Rep. 2017 Nov 8;7(1):15057. doi: 10.1038/s41598-017-14871-2.


Iron-Sulfur Cluster States of the Hydrogenase Maturase HydF.

Shepard EM, Byer AS, Broderick JB.

Biochemistry. 2017 Sep 12;56(36):4733-4734. doi: 10.1021/acs.biochem.7b00735. Epub 2017 Aug 30. No abstract available.


Monovalent Cation Activation of the Radical SAM Enzyme Pyruvate Formate-Lyase Activating Enzyme.

Shisler KA, Hutcheson RU, Horitani M, Duschene KS, Crain AV, Byer AS, Shepard EM, Rasmussen A, Yang J, Broderick WE, Vey JL, Drennan CL, Hoffman BM, Broderick JB.

J Am Chem Soc. 2017 Aug 30;139(34):11803-11813. doi: 10.1021/jacs.7b04883. Epub 2017 Aug 22.


Boldness traits, not dominance, predict exploratory flight range and homing behaviour in homing pigeons.

Portugal SJ, Ricketts RL, Chappell J, White CR, Shepard EL, Biro D.

Philos Trans R Soc Lond B Biol Sci. 2017 Aug 19;372(1727). pii: 20160234. doi: 10.1098/rstb.2016.0234.


Electron Spin Relaxation and Biochemical Characterization of the Hydrogenase Maturase HydF: Insights into [2Fe-2S] and [4Fe-4S] Cluster Communication and Hydrogenase Activation.

Shepard EM, Byer AS, Aggarwal P, Betz JN, Scott AG, Shisler KA, Usselman RJ, Eaton GR, Eaton SS, Broderick JB.

Biochemistry. 2017 Jun 27;56(25):3234-3247. doi: 10.1021/acs.biochem.7b00169. Epub 2017 Jun 13.


Identification of animal movement patterns using tri-axial magnetometry.

Williams HJ, Holton MD, Shepard ELC, Largey N, Norman B, Ryan PG, Duriez O, Scantlebury M, Quintana F, Magowan EA, Marks NJ, Alagaili AN, Bennett NC, Wilson RP.

Mov Ecol. 2017 Mar 27;5:6. doi: 10.1186/s40462-017-0097-x. eCollection 2017.


A spherical-plot solution to linking acceleration metrics with animal performance, state, behaviour and lifestyle.

Wilson RP, Holton MD, Walker JS, Shepard EL, Scantlebury DM, Wilson VL, Wilson GI, Tysse B, Gravenor M, Ciancio J, McNarry MA, Mackintosh KA, Qasem L, Rosell F, Graf PM, Quintana F, Gomez-Laich A, Sala JE, Mulvenna CC, Marks NJ, Jones MW.

Mov Ecol. 2016 Sep 23;4:22. doi: 10.1186/s40462-016-0088-3. eCollection 2016.


Fine-scale flight strategies of gulls in urban airflows indicate risk and reward in city living.

Shepard EL, Williamson C, Windsor SP.

Philos Trans R Soc Lond B Biol Sci. 2016 Sep 26;371(1704). pii: 20150394. doi: 10.1098/rstb.2015.0394.


Moving in a moving medium: new perspectives on flight.

Shepard EL, Ross AN, Portugal SJ.

Philos Trans R Soc Lond B Biol Sci. 2016 Sep 26;371(1704). pii: 20150382. doi: 10.1098/rstb.2015.0382.


Defining Futile and Potentially Inappropriate Interventions: A Policy Statement From the Society of Critical Care Medicine Ethics Committee.

Kon AA, Shepard EK, Sederstrom NO, Swoboda SM, Marshall MF, Birriel B, Rincon F.

Crit Care Med. 2016 Sep;44(9):1769-74. doi: 10.1097/CCM.0000000000001965.


A Redox Active [2Fe-2S] Cluster on the Hydrogenase Maturase HydF.

Shepard EM, Byer AS, Betz JN, Peters JW, Broderick JB.

Biochemistry. 2016 Jun 28;55(25):3514-27. doi: 10.1021/acs.biochem.6b00528. Epub 2016 Jun 14.


Prying into the intimate secrets of animal lives; software beyond hardware for comprehensive annotation in 'Daily Diary' tags.

Walker JS, Jones MW, Laramee RS, Holton MD, Shepard EL, Williams HJ, Scantlebury DM, Marks NJ, Magowan EA, Maguire IE, Bidder OR, Di Virgilio A, Wilson RP.

Mov Ecol. 2015 Sep 21;3(1):29. doi: 10.1186/s40462-015-0056-3. eCollection 2015.


Ecology. Human-wildlife conflicts in a crowded airspace.

Lambertucci SA, Shepard EL, Wilson RP.

Science. 2015 May 1;348(6234):502-4. doi: 10.1126/science.aaa6743. Epub 2015 Apr 30. No abstract available.


Inhibition and oxygen activation in copper amine oxidases.

Shepard EM, Dooley DM.

Acc Chem Res. 2015 May 19;48(5):1218-26. doi: 10.1021/ar500460z. Epub 2015 Apr 21. Review.


[FeFe]-hydrogenase maturation: insights into the role HydE plays in dithiomethylamine biosynthesis.

Betz JN, Boswell NW, Fugate CJ, Holliday GL, Akiva E, Scott AG, Babbitt PC, Peters JW, Shepard EM, Broderick JB.

Biochemistry. 2015 Mar 10;54(9):1807-18. doi: 10.1021/bi501205e. Epub 2015 Mar 2.


Radical S-adenosyl-L-methionine chemistry in the synthesis of hydrogenase and nitrogenase metal cofactors.

Byer AS, Shepard EM, Peters JW, Broderick JB.

J Biol Chem. 2015 Feb 13;290(7):3987-94. doi: 10.1074/jbc.R114.578161. Epub 2014 Dec 4. Review.


[FeFe]- and [NiFe]-hydrogenase diversity, mechanism, and maturation.

Peters JW, Schut GJ, Boyd ES, Mulder DW, Shepard EM, Broderick JB, King PW, Adams MW.

Biochim Biophys Acta. 2015 Jun;1853(6):1350-69. doi: 10.1016/j.bbamcr.2014.11.021. Epub 2014 Nov 24. Review.


Ctla-4 modulates the differentiation of inducible Foxp3+ Treg cells but IL-10 mediates their function in experimental autoimmune encephalomyelitis.

Verhagen J, Gabryšová L, Shepard ER, Wraith DC.

PLoS One. 2014 Sep 19;9(9):e108023. doi: 10.1371/journal.pone.0108023. eCollection 2014.


H-cluster assembly during maturation of the [FeFe]-hydrogenase.

Broderick JB, Byer AS, Duschene KS, Duffus BR, Betz JN, Shepard EM, Peters JW.

J Biol Inorg Chem. 2014 Aug;19(6):747-57. doi: 10.1007/s00775-014-1168-8. Epub 2014 Jun 28. Review.


[FeFe]-hydrogenase maturation.

Shepard EM, Mus F, Betz JN, Byer AS, Duffus BR, Peters JW, Broderick JB.

Biochemistry. 2014 Jul 1;53(25):4090-104. doi: 10.1021/bi500210x. Epub 2014 Jun 16. Erratum in: Biochemistry. 2014 Sep 2;53(34):5588.


Combined Mössbauer spectroscopic, multi-edge X-ray absorption spectroscopic, and density functional theoretical study of the radical SAM enzyme spore photoproduct lyase.

Silver SC, Gardenghi DJ, Naik SG, Shepard EM, Huynh BH, Szilagyi RK, Broderick JB.

J Biol Inorg Chem. 2014 Mar;19(3):465-83. doi: 10.1007/s00775-014-1104-y. Epub 2014 Feb 16.


Radical S-adenosylmethionine enzymes.

Broderick JB, Duffus BR, Duschene KS, Shepard EM.

Chem Rev. 2014 Apr 23;114(8):4229-317. doi: 10.1021/cr4004709. Epub 2014 Jan 29. Review. No abstract available.


Biochemical and kinetic characterization of radical S-adenosyl-L-methionine enzyme HydG.

Driesener RC, Duffus BR, Shepard EM, Bruzas IR, Duschene KS, Coleman NJ, Marrison AP, Salvadori E, Kay CW, Peters JW, Broderick JB, Roach PL.

Biochemistry. 2013 Dec 3;52(48):8696-707. doi: 10.1021/bi401143s. Epub 2013 Nov 20.


From daily movements to population distributions: weather affects competitive ability in a guild of soaring birds.

Shepard EL, Lambertucci SA.

J R Soc Interface. 2013 Sep 11;10(88):20130612. doi: 10.1098/rsif.2013.0612. Print 2013 Nov 6.


Energy landscapes shape animal movement ecology.

Shepard EL, Wilson RP, Rees WG, Grundy E, Lambertucci SA, Vosper SB.

Am Nat. 2013 Sep;182(3):298-312. doi: 10.1086/671257. Epub 2013 Jul 15.


The validity of clinic-based samples in approximating out-of-care HIV-infected populations.

Magnus M, Herwehe J, Wilbright W, Abrams A, Foxhood J, Gruber D, Shepard E, Smith L, Xiao K, Deyoung K, Kaiser M.

AIDS Care. 2014;26(3):367-71. doi: 10.1080/09540121.2013.824537. Epub 2013 Aug 12.


Turn costs change the value of animal search paths.

Wilson RP, Griffiths IW, Legg PA, Friswell MI, Bidder OR, Halsey LG, Lambertucci SA, Shepard EL.

Ecol Lett. 2013 Sep;16(9):1145-50. doi: 10.1111/ele.12149. Epub 2013 Jul 15.


Family presence in the ICU.

Thompson CL, Shepard EK; Patient and Family Support Committee.

Crit Care Nurse. 2013 Jun;33(3):18. doi: 10.4037/ccn2013156. No abstract available.


Modification of the FoxP3 transcription factor principally affects inducible T regulatory cells in a model of experimental autoimmune encephalomyelitis.

Verhagen J, Burton BR, Britton GJ, Shepard ER, Anderton SM, Wraith DC.

PLoS One. 2013 Apr 8;8(4):e61334. doi: 10.1371/journal.pone.0061334. Print 2013.


EPR and FTIR analysis of the mechanism of H2 activation by [FeFe]-hydrogenase HydA1 from Chlamydomonas reinhardtii.

Mulder DW, Ratzloff MW, Shepard EM, Byer AS, Noone SM, Peters JW, Broderick JB, King PW.

J Am Chem Soc. 2013 May 8;135(18):6921-9. doi: 10.1021/ja4000257. Epub 2013 Apr 24.


Host associations, biogeography, and phylogenetics of avian malaria in southern African waterfowl.

Cumming GS, Shepard E, Okanga S, Caron A, Ndlovu M, Peters JL.

Parasitology. 2013 Feb;140(2):193-201. doi: 10.1017/S0031182012001461. Epub 2012 Oct 12.


Iron-sulfur cluster coordination in the [FeFe]-hydrogenase H cluster biosynthetic factor HydF.

Joshi N, Shepard EM, Byer AS, Swanson KD, Broderick JB, Peters JW.

FEBS Lett. 2012 Nov 16;586(22):3939-43. doi: 10.1016/j.febslet.2012.09.028. Epub 2012 Oct 4.


Improved HIV-related outcomes associated with implementation of a novel public health information exchange.

Magnus M, Herwehe J, Gruber D, Wilbright W, Shepard E, Abrams A, Foxhood J, Smith L, Xiao K, DeYoung K, Kaiser M.

Int J Med Inform. 2012 Oct;81(10):e30-8. doi: 10.1016/j.ijmedinf.2012.06.005. Epub 2012 Aug 9.


Tri-axial dynamic acceleration as a proxy for animal energy expenditure; should we be summing values or calculating the vector?

Qasem L, Cardew A, Wilson A, Griffiths I, Halsey LG, Shepard EL, Gleiss AC, Wilson R.

PLoS One. 2012;7(2):e31187. doi: 10.1371/journal.pone.0031187. Epub 2012 Feb 17.


Radical AdoMet enzymes in complex metal cluster biosynthesis.

Duffus BR, Hamilton TL, Shepard EM, Boyd ES, Peters JW, Broderick JB.

Biochim Biophys Acta. 2012 Nov;1824(11):1254-63. doi: 10.1016/j.bbapap.2012.01.002. Epub 2012 Jan 14. Review.


The need for speed: testing acceleration for estimating animal travel rates in terrestrial dead-reckoning systems.

Bidder OR, Soresina M, Shepard EL, Halsey LG, Quintana F, Gómez-Laich A, Wilson RP.

Zoology (Jena). 2012 Feb;115(1):58-64. doi: 10.1016/j.zool.2011.09.003. Epub 2012 Jan 11.


Effects of endosulfan exposure and Taura Syndrome Virus infection on the survival and molting of the marine penaeid shrimp, Litopenaeus vannamei.

Tumburu L, Shepard EF, Strand AE, Browdy CL.

Chemosphere. 2012 Mar;86(9):912-8. doi: 10.1016/j.chemosphere.2011.10.057. Epub 2011 Nov 25.


Energy beyond food: foraging theory informs time spent in thermals by a large soaring bird.

Shepard EL, Lambertucci SA, Vallmitjana D, Wilson RP.

PLoS One. 2011;6(11):e27375. doi: 10.1371/journal.pone.0027375. Epub 2011 Nov 8.


Subcellular distribution and relative expression of fibrocyte markers in the CD/1 mouse cochlea assessed by semiquantitative immunogold electron microscopy.

Mahendrasingam S, Bebb C, Shepard E, Furness DN.

J Histochem Cytochem. 2011 Nov;59(11):984-1000. doi: 10.1369/0022155411421801.


Insights into [FeFe]-hydrogenase structure, mechanism, and maturation.

Mulder DW, Shepard EM, Meuser JE, Joshi N, King PW, Posewitz MC, Broderick JB, Peters JW.

Structure. 2011 Aug 10;19(8):1038-52. doi: 10.1016/j.str.2011.06.008. Review.


Biosynthesis of complex iron-sulfur enzymes.

Shepard EM, Boyd ES, Broderick JB, Peters JW.

Curr Opin Chem Biol. 2011 Apr;15(2):319-27. doi: 10.1016/j.cbpa.2011.02.012. Epub 2011 Mar 8. Review.


Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution.

Pope WH, Jacobs-Sera D, Russell DA, Peebles CL, Al-Atrache Z, Alcoser TA, Alexander LM, Alfano MB, Alford ST, Amy NE, Anderson MD, Anderson AG, Ang AA, Ares M Jr, Barber AJ, Barker LP, Barrett JM, Barshop WD, Bauerle CM, Bayles IM, Belfield KL, Best AA, Borjon A Jr, Bowman CA, Boyer CA, Bradley KW, Bradley VA, Broadway LN, Budwal K, Busby KN, Campbell IW, Campbell AM, Carey A, Caruso SM, Chew RD, Cockburn CL, Cohen LB, Corajod JM, Cresawn SG, Davis KR, Deng L, Denver DR, Dixon BR, Ekram S, Elgin SC, Engelsen AE, English BE, Erb ML, Estrada C, Filliger LZ, Findley AM, Forbes L, Forsyth MH, Fox TM, Fritz MJ, Garcia R, George ZD, Georges AE, Gissendanner CR, Goff S, Goldstein R, Gordon KC, Green RD, Guerra SL, Guiney-Olsen KR, Guiza BG, Haghighat L, Hagopian GV, Harmon CJ, Harmson JS, Hartzog GA, Harvey SE, He S, He KJ, Healy KE, Higinbotham ER, Hildebrandt EN, Ho JH, Hogan GM, Hohenstein VG, Holz NA, Huang VJ, Hufford EL, Hynes PM, Jackson AS, Jansen EC, Jarvik J, Jasinto PG, Jordan TC, Kasza T, Katelyn MA, Kelsey JS, Kerrigan LA, Khaw D, Kim J, Knutter JZ, Ko CC, Larkin GV, Laroche JR, Latif A, Leuba KD, Leuba SI, Lewis LO, Loesser-Casey KE, Long CA, Lopez AJ, Lowery N, Lu TQ, Mac V, Masters IR, McCloud JJ, McDonough MJ, Medenbach AJ, Menon A, Miller R, Morgan BK, Ng PC, Nguyen E, Nguyen KT, Nguyen ET, Nicholson KM, Parnell LA, Peirce CE, Perz AM, Peterson LJ, Pferdehirt RE, Philip SV, Pogliano K, Pogliano J, Polley T, Puopolo EJ, Rabinowitz HS, Resiss MJ, Rhyan CN, Robinson YM, Rodriguez LL, Rose AC, Rubin JD, Ruby JA, Saha MS, Sandoz JW, Savitskaya J, Schipper DJ, Schnitzler CE, Schott AR, Segal JB, Shaffer CD, Sheldon KE, Shepard EM, Shepardson JW, Shroff MK, Simmons JM, Simms EF, Simpson BM, Sinclair KM, Sjoholm RL, Slette IJ, Spaulding BC, Straub CL, Stukey J, Sughrue T, Tang TY, Tatyana LM, Taylor SB, Taylor BJ, Temple LM, Thompson JV, Tokarz MP, Trapani SE, Troum AP, Tsay J, Tubbs AT, Walton JM, Wang DH, Wang H, Warner JR, Weisser EG, Wendler SC, Weston-Hafer KA, Whelan HM, Williamson KE, Willis AN, Wirtshafter HS, Wong TW, Wu P, Yang Yj, Yee BC, Zaidins DA, Zhang B, Zúniga MY, Hendrix RW, Hatfull GF.

PLoS One. 2011 Jan 27;6(1):e16329. doi: 10.1371/journal.pone.0016329.


Assessing the development and application of the accelerometry technique for estimating energy expenditure.

Halsey LG, Shepard EL, Wilson RP.

Comp Biochem Physiol A Mol Integr Physiol. 2011 Mar;158(3):305-14. doi: 10.1016/j.cbpa.2010.09.002. Epub 2010 Sep 16. Review.


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