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Items: 14

1.

N-acetyltransferase AAC(3)-I confers gentamicin resistance to Phytophthora palmivora and Phytophthora infestans.

Evangelisti E, Yunusov T, Shenhav L, Schornack S.

BMC Microbiol. 2019 Nov 27;19(1):265. doi: 10.1186/s12866-019-1642-0.

2.

Hydrodynamic Shape Changes Underpin Nuclear Rerouting in Branched Hyphae of an Oomycete Pathogen.

Evangelisti E, Shenhav L, Yunusov T, Le Naour-Vernet M, Rink P, Schornack S.

mBio. 2019 Oct 1;10(5). pii: e01516-19. doi: 10.1128/mBio.01516-19.

3.

A secreted WY-domain-containing protein present in European isolates of the oomycete Plasmopara viticola induces cell death in grapevine and tobacco species.

Combier M, Evangelisti E, Piron MC, Rengel D, Legrand L, Shenhav L, Bouchez O, Schornack S, Mestre P.

PLoS One. 2019 Jul 29;14(7):e0220184. doi: 10.1371/journal.pone.0220184. eCollection 2019.

4.

Modeling the temporal dynamics of the gut microbial community in adults and infants.

Shenhav L, Furman O, Briscoe L, Thompson M, Silverman JD, Mizrahi I, Halperin E.

PLoS Comput Biol. 2019 Jun 27;15(6):e1006960. doi: 10.1371/journal.pcbi.1006960. eCollection 2019 Jun.

5.

Re-examining the robustness of voice features in predicting depression: Compared with baseline of confounders.

Pan W, Flint J, Shenhav L, Liu T, Liu M, Hu B, Zhu T.

PLoS One. 2019 Jun 20;14(6):e0218172. doi: 10.1371/journal.pone.0218172. eCollection 2019.

6.

FEAST: fast expectation-maximization for microbial source tracking.

Shenhav L, Thompson M, Joseph TA, Briscoe L, Furman O, Bogumil D, Mizrahi I, Pe'er I, Halperin E.

Nat Methods. 2019 Jul;16(7):627-632. doi: 10.1038/s41592-019-0431-x. Epub 2019 Jun 10.

PMID:
31182859
7.

BayesCCE: a Bayesian framework for estimating cell-type composition from DNA methylation without the need for methylation reference.

Rahmani E, Schweiger R, Shenhav L, Wingert T, Hofer I, Gabel E, Eskin E, Halperin E.

Genome Biol. 2018 Sep 21;19(1):141. doi: 10.1186/s13059-018-1513-2.

8.

Using Stochastic Approximation Techniques to Efficiently Construct Confidence Intervals for Heritability.

Schweiger R, Fisher E, Rahmani E, Shenhav L, Rosset S, Halperin E.

J Comput Biol. 2018 Jul;25(7):794-808. doi: 10.1089/cmb.2018.0047. Epub 2018 Jun 22.

PMID:
29932739
9.

Genes Associated with Pancreas Development and Function Maintain Open Chromatin in iPSCs Generated from Human Pancreatic Beta Cells.

Thurner M, Shenhav L, Wesolowska-Andersen A, Bennett AJ, Barrett A, Gloyn AL, McCarthy MI, Beer NL, Efrat S.

Stem Cell Reports. 2017 Nov 14;9(5):1395-1405. doi: 10.1016/j.stemcr.2017.09.020. Epub 2017 Nov 1.

10.

GLINT: a user-friendly toolset for the analysis of high-throughput DNA-methylation array data.

Rahmani E, Yedidim R, Shenhav L, Schweiger R, Weissbrod O, Zaitlen N, Halperin E.

Bioinformatics. 2017 Jun 15;33(12):1870-1872. doi: 10.1093/bioinformatics/btx059.

11.

Genome-wide methylation data mirror ancestry information.

Rahmani E, Shenhav L, Schweiger R, Yousefi P, Huen K, Eskenazi B, Eng C, Huntsman S, Hu D, Galanter J, Oh SS, Waldenberger M, Strauch K, Grallert H, Meitinger T, Gieger C, Holland N, Burchard EG, Zaitlen N, Halperin E.

Epigenetics Chromatin. 2017 Jan 3;10:1. doi: 10.1186/s13072-016-0108-y. eCollection 2017.

12.

GeneAnalytics: An Integrative Gene Set Analysis Tool for Next Generation Sequencing, RNAseq and Microarray Data.

Ben-Ari Fuchs S, Lieder I, Stelzer G, Mazor Y, Buzhor E, Kaplan S, Bogoch Y, Plaschkes I, Shitrit A, Rappaport N, Kohn A, Edgar R, Shenhav L, Safran M, Lancet D, Guan-Golan Y, Warshawsky D, Shtrichman R.

OMICS. 2016 Mar;20(3):139-51. doi: 10.1089/omi.2015.0168.

13.

Efficacy of Corneal Collagen Cross-Linking for the Treatment of Keratoconus: A Systematic Review and Meta-Analysis.

Meiri Z, Keren S, Rosenblatt A, Sarig T, Shenhav L, Varssano D.

Cornea. 2016 Mar;35(3):417-28. doi: 10.1097/ICO.0000000000000723. Review.

PMID:
26751990
14.

MDR1 expression identifies human melanoma stem cells.

Keshet GI, Goldstein I, Itzhaki O, Cesarkas K, Shenhav L, Yakirevitch A, Treves AJ, Schachter J, Amariglio N, Rechavi G.

Biochem Biophys Res Commun. 2008 Apr 18;368(4):930-6. doi: 10.1016/j.bbrc.2008.02.022. Epub 2008 Feb 13.

PMID:
18279661

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