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An introduction to deep learning in medical physics: advantages, potential, and challenges.

Shen C, Nguyen D, Zhou Z, Jiang SB, Dong B, Jia X.

Phys Med Biol. 2020 Jan 23. doi: 10.1088/1361-6560/ab6f51. [Epub ahead of print]


Dimerization/oligomerization of the extracellular domain of the GLP-1 receptor and the negative cooperativity in its ligand binding revealed by the improved NanoBiT.

Song X, Yu Y, Shen C, Wang Y, Wang N.

FASEB J. 2020 Jan 23. doi: 10.1096/fj.201902007R. [Epub ahead of print]


SENP1 is a crucial promotor for hepatocellular carcinoma through deSUMOylation of UBE2T.

Tao Y, Li R, Shen C, Li J, Zhang Q, Ma Z, Wang F, Wang Z.

Aging (Albany NY). 2020 Jan 22;12. doi: 10.18632/aging.102700. [Epub ahead of print]


Primary hepatic angiosarcoma with spleen metastases in an adult woman: a case report and literature review.

Li Z, Sun H, Shen C, Yang C, Wang Y, Wang W, Jia Y, Zhao Q, Zhao C.

Int J Clin Exp Pathol. 2017 Nov 1;10(11):11211-11218. eCollection 2017.


A robust TDP-43 knock-in mouse model of ALS.

Huang SL, Wu LS, Lee M, Chang CW, Cheng WC, Fang YS, Chen YR, Cheng PL, Shen CJ.

Acta Neuropathol Commun. 2020 Jan 21;8(1):3. doi: 10.1186/s40478-020-0881-5.


GRK2 enforces androgen receptor dependence in the prostate and prostate tumors.

Adler AJ, Mittal P, Hagymasi AT, Menoret A, Shen C, Agliano F, Wright KT, Grady JJ, Kuo CL, Ballesteros E, Claffey KP, Vella AT.

Oncogene. 2020 Jan 20. doi: 10.1038/s41388-020-1159-x. [Epub ahead of print]


SiNiSan ameliorates depression-like behavior in rats by enhancing synaptic plasticity via the CaSR-PKC-ERK signaling pathway.

Shen C, Cao K, Cui S, Cui Y, Mo H, Wen W, Dong Z, Lin H, Bai S, Yang L, Zhang R, Shi Y.

Biomed Pharmacother. 2020 Jan 17;124:109787. doi: 10.1016/j.biopha.2019.109787. [Epub ahead of print]


Bioavailability and translocation of metal oxide nanoparticles in the soil-rice plant system.

Peng C, Tong H, Shen C, Sun L, Yuan P, He M, Shi J.

Sci Total Environ. 2020 Jan 13;713:136662. doi: 10.1016/j.scitotenv.2020.136662. [Epub ahead of print]


TGR5 receptor activation attenuates diabetic retinopathy through suppression of RhoA/ROCK signaling.

Zhu L, Wang W, Xie TH, Zou J, Nie X, Wang X, Zhang MY, Wang ZY, Gu S, Zhuang M, Tan J, Shen C, Dai Y, Yang X, Yao Y, Wei TT.

FASEB J. 2020 Jan 19. doi: 10.1096/fj.201902496RR. [Epub ahead of print]


TiO2 nanoparticles accelerate methanogenesis in mangrove wetlands sediment.

Ma W, Li H, Zhang W, Shen C, Wang L, Li Y, Li Q, Wang Y.

Sci Total Environ. 2020 Jan 11;713:136602. doi: 10.1016/j.scitotenv.2020.136602. [Epub ahead of print]


TDP-43 facilitates milk lipid secretion by post-transcriptional regulation of Btn1a1 and Xdh.

Zhao L, Ke H, Xu H, Wang GD, Zhang H, Zou L, Xiang S, Li M, Peng L, Zhou M, Li L, Ao L, Yang Q, Shen CJ, Yi P, Wang L, Jiao B.

Nat Commun. 2020 Jan 17;11(1):341. doi: 10.1038/s41467-019-14183-1.


Overexpression of RACK1 Predicts Poor Prognosis in Melanoma.

Shen C, Hua H, Gu L, Cao S, Cai H, Yao X, Chen X.

J Cancer. 2020 Jan 1;11(4):795-803. doi: 10.7150/jca.36905. eCollection 2020.


Contribution of heavy metal in driving microbial distribution in a eutrophic river.

Wang J, Yuan S, Tang L, Pan X, Pu X, Li R, Shen C.

Sci Total Environ. 2019 Dec 28;712:136295. doi: 10.1016/j.scitotenv.2019.136295. [Epub ahead of print]


The CatLet score and outcome prediction in acute myocardial infarction for patients undergoing primary percutaneous intervention: A proof-of-concept study.

Xu MX, Ruddy TD, Schoenhagen P, Bartel T, Di Bartolomeo R, von Kodolitsch Y, Escaned J, Shen C, He YM.

Catheter Cardiovasc Interv. 2020 Jan 14. doi: 10.1002/ccd.28724. [Epub ahead of print]


Discharge of deeply rooted fluids from submarine mud volcanism in the Taiwan accretionary prism.

Chen NC, Yang TF, Hong WL, Yu TL, Lin IT, Wang PL, Lin S, Su CC, Shen CC, Wang Y, Lin LH.

Sci Rep. 2020 Jan 15;10(1):381. doi: 10.1038/s41598-019-57250-9.


Increased granulysin in the peripheral blood and tissues of patients with oral lichen planus.

Xu J, Liu L, Shan J, Li S, Shen C, Wang C, Fan Y.

Int J Clin Exp Pathol. 2019 May 1;12(5):1634-1641. eCollection 2019.


Study on reaction mechanism of superior bamboo biochar catalyst production by molten alkali carbonates pyrolysis and its application for cellulose hydrolysis.

Wei Y, Shen C, Xie J, Bu Q.

Sci Total Environ. 2020 Jan 7;712:136435. doi: 10.1016/j.scitotenv.2019.136435. [Epub ahead of print]


Age estimation for children and young adults by volumetric analysis of upper anterior teeth using CBCT data.

Yang Z, Fan L, Kwon K, Pan J, Shen C, Tao J, Ji F.

Folia Morphol (Warsz). 2020 Jan 13. doi: 10.5603/FM.a2020.0004. [Epub ahead of print]


An injectable thermosensitive hydrogel loaded with an ancient natural drug colchicine for myocardial repair after infarction.

Chen Y, Shi J, Zhang Y, Miao J, Zhao Z, Jin X, Liu L, Yu L, Shen C, Ding J.

J Mater Chem B. 2020 Jan 13. doi: 10.1039/c9tb02523e. [Epub ahead of print]


Soluble guanylate cyclase contribute genetic susceptibility to essential hypertension in the Han Chinese population.

Chen Y, Zhu L, Fang Z, Jin Y, Shen C, Yao Y, Zhou C.

Ann Transl Med. 2019 Nov;7(22):620. doi: 10.21037/atm.2019.11.49.


Map-based cloning of qBWT-c12 discovered brassinosteroid-mediated control of organ size in cotton.

Ahmed MM, Huang C, Shen C, Khan AQ, Lin Z.

Plant Sci. 2020 Feb;291:110315. doi: 10.1016/j.plantsci.2019.110315. Epub 2019 Nov 6.


Predicting risk of chemotherapy-induced severe neutropenia: A pooled analysis in individual patients data with advanced lung cancer.

Cao X, Ganti AK, Stinchcombe T, Wong ML, Ho JC, Shen C, Liu Y, Crawford J, Pang H, Wang X.

Lung Cancer. 2020 Jan 3;141:14-20. doi: 10.1016/j.lungcan.2020.01.004. [Epub ahead of print]


The impact of Focused Attention on subsequent emotional recollection: A functional MRI investigation.

Dolcos F, Katsumi Y, Bogdan P, Shen C, Jun S, Buetti S, Lleras A, Bost KF, Weymar M, Dolcos S.

Neuropsychologia. 2020 Jan 8:107338. doi: 10.1016/j.neuropsychologia.2020.107338. [Epub ahead of print]


Influence of inflammatory arthritis on leukocyte esterase strip results in the diagnosis of periprosthetic joint infection.

Zhang J, Gui B, Cheng F, Rong G, Tang Z, Shen C.

J Orthop Surg Res. 2020 Jan 10;15(1):10. doi: 10.1186/s13018-019-1523-0.


Bimetal Synergistic Effect Induced High Reversibility of Conversion-Type Ni@NiCo2S4 as Freestanding Anode for Sodium-Ion Batteries.

Zhang J, Song K, Mi L, Liu C, Feng X, Zhang J, Chen W, Shen C.

J Phys Chem Lett. 2020 Jan 10. doi: 10.1021/acs.jpclett.9b03336. [Epub ahead of print]


Simultaneous Nucleic Acids Detection and Elimination of Carryover Contamination With Nanoparticles-Based Biosensor- and Antarctic Thermal Sensitive Uracil-DNA-Glycosylase-Supplemented Polymerase Spiral Reaction.

Wang Y, Jiao WW, Wang Y, Sun L, Li JQ, Wang ZM, Xiao J, Shen C, Xu F, Qi H, Wang YH, Guo YJ, Shen AD.

Front Bioeng Biotechnol. 2019 Dec 13;7:401. doi: 10.3389/fbioe.2019.00401. eCollection 2019.


Application of Somatostatin, Chemotherapy Combined with TAE in Heterogeneous Glucagonoma Presented with Necrolytic Migratory Erythema.

Shen C, He J, Le X, Zheng L, Cao D.

Onco Targets Ther. 2019 Dec 20;12:11339-11344. doi: 10.2147/OTT.S237634. eCollection 2019.


In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics.

Yang Y, Liu X, Shen C, Lin Y, Yang P, Qiao L.

Nat Commun. 2020 Jan 9;11(1):146. doi: 10.1038/s41467-019-13866-z.


Tea consumption and the risk of atherosclerotic cardiovascular disease and all-cause mortality: The China-PAR project.

Wang X, Liu F, Li J, Yang X, Chen J, Cao J, Wu X, Lu X, Huang J, Li Y, Zhao L, Shen C, Hu D, Yu L, Liu X, Wu X, Wu S, Gu D.

Eur J Prev Cardiol. 2020 Jan 8:2047487319894685. doi: 10.1177/2047487319894685. [Epub ahead of print]


[First bite syndrome: clinical study of six cases and review of the literature].

Huang S, Huang CP, Shen CY, Lin Y, Wang Y.

Lin Chung Er Bi Yan Hou Tou Jing Wai Ke Za Zhi. 2019 Dec;33(12):1196-1199. doi: 10.13201/j.issn.1001-1781.2019.12.019. Review. Chinese.


RV-59 suppresses cytoplasmic Nrf2-mediated 5-fluorouracil resistance and tumor growth in colorectal cancer.

Shen CJ, Lin PL, Lin HC, Cheng YW, Huang HS, Lee H.

Am J Cancer Res. 2019 Dec 1;9(12):2789-2796. eCollection 2019.


Fine-mapping of 150 breast cancer risk regions identifies 191 likely target genes.

Fachal L, Aschard H, Beesley J, Barnes DR, Allen J, Kar S, Pooley KA, Dennis J, Michailidou K, Turman C, Soucy P, Lemaçon A, Lush M, Tyrer JP, Ghoussaini M, Moradi Marjaneh M, Jiang X, Agata S, Aittomäki K, Alonso MR, Andrulis IL, Anton-Culver H, Antonenkova NN, Arason A, Arndt V, Aronson KJ, Arun BK, Auber B, Auer PL, Azzollini J, Balmaña J, Barkardottir RB, Barrowdale D, Beeghly-Fadiel A, Benitez J, Bermisheva M, Białkowska K, Blanco AM, Blomqvist C, Blot W, Bogdanova NV, Bojesen SE, Bolla MK, Bonanni B, Borg A, Bosse K, Brauch H, Brenner H, Briceno I, Brock IW, Brooks-Wilson A, Brüning T, Burwinkel B, Buys SS, Cai Q, Caldés T, Caligo MA, Camp NJ, Campbell I, Canzian F, Carroll JS, Carter BD, Castelao JE, Chiquette J, Christiansen H, Chung WK, Claes KBM, Clarke CL; GEMO Study Collaborators; EMBRACE Collaborators, Collée JM, Cornelissen S, Couch FJ, Cox A, Cross SS, Cybulski C, Czene K, Daly MB, de la Hoya M, Devilee P, Diez O, Ding YC, Dite GS, Domchek SM, Dörk T, Dos-Santos-Silva I, Droit A, Dubois S, Dumont M, Duran M, Durcan L, Dwek M, Eccles DM, Engel C, Eriksson M, Evans DG, Fasching PA, Fletcher O, Floris G, Flyger H, Foretova L, Foulkes WD, Friedman E, Fritschi L, Frost D, Gabrielson M, Gago-Dominguez M, Gambino G, Ganz PA, Gapstur SM, Garber J, García-Sáenz JA, Gaudet MM, Georgoulias V, Giles GG, Glendon G, Godwin AK, Goldberg MS, Goldgar DE, González-Neira A, Tibiletti MG, Greene MH, Grip M, Gronwald J, Grundy A, Guénel P, Hahnen E, Haiman CA, Håkansson N, Hall P, Hamann U, Harrington PA, Hartikainen JM, Hartman M, He W, Healey CS, Heemskerk-Gerritsen BAM, Heyworth J, Hillemanns P, Hogervorst FBL, Hollestelle A, Hooning MJ, Hopper JL, Howell A, Huang G, Hulick PJ, Imyanitov EN; KConFab Investigators; HEBON Investigators; ABCTB Investigators, Isaacs C, Iwasaki M, Jager A, Jakimovska M, Jakubowska A, James PA, Janavicius R, Jankowitz RC, John EM, Johnson N, Jones ME, Jukkola-Vuorinen A, Jung A, Kaaks R, Kang D, Kapoor PM, Karlan BY, Keeman R, Kerin MJ, Khusnutdinova E, Kiiski JI, Kirk J, Kitahara CM, Ko YD, Konstantopoulou I, Kosma VM, Koutros S, Kubelka-Sabit K, Kwong A, Kyriacou K, Laitman Y, Lambrechts D, Lee E, Leslie G, Lester J, Lesueur F, Lindblom A, Lo WY, Long J, Lophatananon A, Loud JT, Lubiński J, MacInnis RJ, Maishman T, Makalic E, Mannermaa A, Manoochehri M, Manoukian S, Margolin S, Martinez ME, Matsuo K, Maurer T, Mavroudis D, Mayes R, McGuffog L, McLean C, Mebirouk N, Meindl A, Miller A, Miller N, Montagna M, Moreno F, Muir K, Mulligan AM, Muñoz-Garzon VM, Muranen TA, Narod SA, Nassir R, Nathanson KL, Neuhausen SL, Nevanlinna H, Neven P, Nielsen FC, Nikitina-Zake L, Norman A, Offit K, Olah E, Olopade OI, Olsson H, Orr N, Osorio A, Pankratz VS, Papp J, Park SK, Park-Simon TW, Parsons MT, Paul J, Pedersen IS, Peissel B, Peshkin B, Peterlongo P, Peto J, Plaseska-Karanfilska D, Prajzendanc K, Prentice R, Presneau N, Prokofyeva D, Pujana MA, Pylkäs K, Radice P, Ramus SJ, Rantala J, Rau-Murthy R, Rennert G, Risch HA, Robson M, Romero A, Rossing M, Saloustros E, Sánchez-Herrero E, Sandler DP, Santamariña M, Saunders C, Sawyer EJ, Scheuner MT, Schmidt DF, Schmutzler RK, Schneeweiss A, Schoemaker MJ, Schöttker B, Schürmann P, Scott C, Scott RJ, Senter L, Seynaeve CM, Shah M, Sharma P, Shen CY, Shu XO, Singer CF, Slavin TP, Smichkoska S, Southey MC, Spinelli JJ, Spurdle AB, Stone J, Stoppa-Lyonnet D, Sutter C, Swerdlow AJ, Tamimi RM, Tan YY, Tapper WJ, Taylor JA, Teixeira MR, Tengström M, Teo SH, Terry MB, Teulé A, Thomassen M, Thull DL, Tischkowitz M, Toland AE, Tollenaar RAEM, Tomlinson I, Torres D, Torres-Mejía G, Troester MA, Truong T, Tung N, Tzardi M, Ulmer HU, Vachon CM, van Asperen CJ, van der Kolk LE, van Rensburg EJ, Vega A, Viel A, Vijai J, Vogel MJ, Wang Q, Wappenschmidt B, Weinberg CR, Weitzel JN, Wendt C, Wildiers H, Winqvist R, Wolk A, Wu AH, Yannoukakos D, Zhang Y, Zheng W, Hunter D, Pharoah PDP, Chang-Claude J, García-Closas M, Schmidt MK, Milne RL, Kristensen VN, French JD, Edwards SL, Antoniou AC, Chenevix-Trench G, Simard J, Easton DF, Kraft P, Dunning AM.

Nat Genet. 2020 Jan;52(1):56-73. doi: 10.1038/s41588-019-0537-1. Epub 2020 Jan 7.


Clinical Outcomes of Dynamic Computed Tomography Myocardial Perfusion Imaging Combined With Coronary Computed Tomography Angiography Versus Coronary Computed Tomography Angiography-Guided Strategy.

Yu M, Shen C, Dai X, Lu Z, Wang Y, Lu B, Zhang J.

Circ Cardiovasc Imaging. 2020 Jan;13(1):e009775. doi: 10.1161/CIRCIMAGING.119.009775. Epub 2020 Jan 8.


A Randomized Pilot Clinical Assessment Of Three Skincare Regimens On Skin Conditions In Infants.

Duan Y, Ma L, Galzote C, Kong FQ, Shen CP.

Clin Cosmet Investig Dermatol. 2019 Dec 16;12:895-909. doi: 10.2147/CCID.S204216. eCollection 2019.


Perivascular fat attenuation index and high-risk plaque features evaluated by coronary CT angiography: relationship with serum inflammatory marker level.

Dai X, Deng J, Yu M, Lu Z, Shen C, Zhang J.

Int J Cardiovasc Imaging. 2020 Jan 6. doi: 10.1007/s10554-019-01758-8. [Epub ahead of print]


A functional variant near XCL1 gene improves breast cancer survival via promoting cancer immunity.

Chou WC, Hsiung CN, Chen WT, Tseng LM, Wang HC, Chu HW, Hou MF, Yu JC, Shen CY.

Int J Cancer. 2020 Jan 6. doi: 10.1002/ijc.32855. [Epub ahead of print]


Pig trade networks through live pig markets in Guangdong Province, China.

Li Y, Huang B, Shen C, Cai C, Wang Y, Edwards J, Zhang G, Robertson ID.

Transbound Emerg Dis. 2020 Jan 6. doi: 10.1111/tbed.13472. [Epub ahead of print]


Deep Clustering With Sample-Assignment Invariance Prior.

Peng X, Zhu H, Feng J, Shen C, Zhang H, Zhou JT.

IEEE Trans Neural Netw Learn Syst. 2019 Dec 31. doi: 10.1109/TNNLS.2019.2958324. [Epub ahead of print]


Association of DIAPH1 gene polymorphisms with ischemic stroke.

Ren Z, Chen X, Tang W, Li J, Yang S, Chen Y, Zhao X, Zong H, Liu C, Shen C.

Aging (Albany NY). 2020 Jan 3;12(1):416-435. doi: 10.18632/aging.102631. Epub 2020 Jan 3.


Accurate Tensor Completion via Adaptive Low-Rank Representation.

Zhang L, Wei W, Shi Q, Shen C, van den Hengel A, Zhang Y.

IEEE Trans Neural Netw Learn Syst. 2019 Dec 30. doi: 10.1109/TNNLS.2019.2952427. [Epub ahead of print]


A fluorescent three-sensor array for heavy metals in environmental water sources.

Bowyer AA, Shen C, New EJ.

Analyst. 2020 Jan 2. doi: 10.1039/c9an02182e. [Epub ahead of print]


Staging Surgery for The Treatment of Aortic Arch Aneurysm Combined with Aberrant Bilateral Subclavian Artery, Persistent Left Superior Vena Cava and Airway Compression: A Case Report.

Fu J, Shen C, Gao S, Liu C, Liu W, Nan Y, Qu S, Wu W, Ge Y, Lv X.

Heart Surg Forum. 2019 Oct 24;22(6):E448-E451. doi: 10.1532/hsf.2613.


Investigation of the eddy current effect on the high frequency response of the Mirnov probe on J-TEXT.

Shen C, Cai Z, Ren T, Zhang X, Hu Q, Wang N, Huang Z, Zhou S, Li J, Li M, Li D, Han D, Ding Y.

Rev Sci Instrum. 2019 Dec 1;90(12):123506. doi: 10.1063/1.5093486.


Combination of iterated cubature Kalman filter and neural networks for GPS/INS during GPS outages.

Liu F, Sun X, Xiong Y, Huang H, Guo X, Zhang Y, Shen C.

Rev Sci Instrum. 2019 Dec 1;90(12):125005. doi: 10.1063/1.5094559.


Mineralogical characteristics and photocatalytic properties of natural sphalerite from China.

Shen C, Gu X, Yang B, Zhang D, Wang Z, Shu Z, Dick J, Lu A.

J Environ Sci (China). 2020 Mar;89:156-166. doi: 10.1016/j.jes.2019.10.017. Epub 2019 Nov 9.


Incorporating Multisource Knowledge To Predict Drug Synergy Based on Graph Co-regularization.

Ding P, Shen C, Lai Z, Liang C, Li G, Luo J.

J Chem Inf Model. 2020 Jan 9. doi: 10.1021/acs.jcim.9b00793. [Epub ahead of print]


Long term exposure to ambient fine particulate matter and incidence of stroke: prospective cohort study from the China-PAR project.

Huang K, Liang F, Yang X, Liu F, Li J, Xiao Q, Chen J, Liu X, Cao J, Shen C, Yu L, Lu F, Wu X, Zhao L, Wu X, Li Y, Hu D, Huang J, Liu Y, Lu X, Gu D.

BMJ. 2019 Dec 30;367:l6720. doi: 10.1136/bmj.l6720.


Doubly Robust Estimation of Causal Effect: Upping the Odds of Getting the Right Answers.

Li X, Shen C.

Circ Cardiovasc Qual Outcomes. 2020 Jan;13(1):e006065. doi: 10.1161/CIRCOUTCOMES.119.006065. Epub 2019 Dec 31.


Effects of BSF on Podocyte Apoptosis via Regulating the ROS-Mediated PI3K/AKT Pathway in DN.

Cui FQ, Wang YF, Gao YB, Meng Y, Cai Z, Shen C, Liu ZQ, Jiang XC, Zhao WJ.

J Diabetes Res. 2019 Dec 7;2019:9512406. doi: 10.1155/2019/9512406. eCollection 2019.


Direct investigation of current transport in cells by conductive atomic force microscopy.

Zhao W, Cheong LZ, Xu S, Cui W, Song S, Rourk CJ, Shen C.

J Microsc. 2019 Dec 28. doi: 10.1111/jmi.12861. [Epub ahead of print]


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