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Items: 9

1.

Spatiotemporal allele organization by allele-specific CRISPR live-cell imaging (SNP-CLING).

Maass PG, Barutcu AR, Shechner DM, Weiner CL, Melé M, Rinn JL.

Nat Struct Mol Biol. 2018 Feb;25(2):176-184. doi: 10.1038/s41594-017-0015-3. Epub 2018 Jan 8.

2.

High-throughput identification of RNA nuclear enrichment sequences.

Shukla CJ, McCorkindale AL, Gerhardinger C, Korthauer KD, Cabili MN, Shechner DM, Irizarry RA, Maass PG, Rinn JL.

EMBO J. 2018 Mar 15;37(6). pii: e98452. doi: 10.15252/embj.201798452. Epub 2018 Jan 15.

3.

Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking.

Kaewsapsak P, Shechner DM, Mallard W, Rinn JL, Ting AY.

Elife. 2017 Dec 14;6. pii: e29224. doi: 10.7554/eLife.29224.

4.

Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs.

Melé M, Mattioli K, Mallard W, Shechner DM, Gerhardinger C, Rinn JL.

Genome Res. 2017 Jan;27(1):27-37. doi: 10.1101/gr.214205.116. Epub 2016 Dec 7.

5.

Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display.

Shechner DM, Hacisuleyman E, Younger ST, Rinn JL.

Nat Methods. 2015 Jul;12(7):664-70. doi: 10.1038/nmeth.3433. Epub 2015 Jun 1.

6.

The structural basis of RNA-catalyzed RNA polymerization.

Shechner DM, Bartel DP.

Nat Struct Mol Biol. 2011 Aug 21;18(9):1036-42. doi: 10.1038/nsmb.2107.

7.

A portable RNA sequence whose recognition by a synthetic antibody facilitates structural determination.

Koldobskaya Y, Duguid EM, Shechner DM, Suslov NB, Ye J, Sidhu SS, Bartel DP, Koide S, Kossiakoff AA, Piccirilli JA.

Nat Struct Mol Biol. 2011 Jan;18(1):100-6. doi: 10.1038/nsmb.1945. Epub 2010 Dec 12.

8.

Crystal structure of the catalytic core of an RNA-polymerase ribozyme.

Shechner DM, Grant RA, Bagby SC, Koldobskaya Y, Piccirilli JA, Bartel DP.

Science. 2009 Nov 27;326(5957):1271-5. doi: 10.1126/science.1174676.

9.

A class I ligase ribozyme with reduced Mg2+ dependence: Selection, sequence analysis, and identification of functional tertiary interactions.

Bagby SC, Bergman NH, Shechner DM, Yen C, Bartel DP.

RNA. 2009 Dec;15(12):2129-46. doi: 10.1261/rna.1912509.

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