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Fundamental principles of rehabilitation and musculoskeletal tissue healing.

Kirkby Shaw K, Alvarez L, Foster SA, Tomlinson JE, Shaw AJ, Pozzi A.

Vet Surg. 2019 Jul 4. doi: 10.1111/vsu.13270. [Epub ahead of print]


Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes.

Liu Y, Johnson MG, Cox CJ, Medina R, Devos N, Vanderpoorten A, Hedenäs L, Bell NE, Shevock JR, Aguero B, Quandt D, Wickett NJ, Shaw AJ, Goffinet B.

Nat Commun. 2019 Apr 2;10(1):1485. doi: 10.1038/s41467-019-09454-w.


Functional trait evolution in Sphagnum peat mosses and its relationship to niche construction.

Piatkowski BT, Shaw AJ.

New Phytol. 2019 Jul;223(2):939-949. doi: 10.1111/nph.15825. Epub 2019 Apr 26.


Remotely Controlled in Situ Growth of Silver Microwires Forming Bioelectronic Interfaces.

Sanjuan-Alberte P, Saleh E, Shaw AJ, Lacalendola N, Willmott G, Vaithilingam J, Alexander MR, Hague RJM, Rawson FJ.

ACS Appl Mater Interfaces. 2019 Mar 6;11(9):8928-8936. doi: 10.1021/acsami.8b22075. Epub 2019 Feb 20.


Range change evolution of peat mosses (Sphagnum) within and between climate zones.

Shaw AJ, Carter BE, Aguero B, da Costa DP, Crowl AA.

Glob Chang Biol. 2019 Jan;25(1):108-120. doi: 10.1111/gcb.14485. Epub 2018 Nov 15.


Evolutionary origin of the latitudinal diversity gradient in liverworts.

Laenen B, Patiño J, Hagborg A, Désamoré A, Wang J, Shaw AJ, Goffinet B, Vanderpoorten A.

Mol Phylogenet Evol. 2018 Oct;127:606-612. doi: 10.1016/j.ympev.2018.06.007. Epub 2018 Jun 8.


High-oleate yeast oil without polyunsaturated fatty acids.

Tsakraklides V, Kamineni A, Consiglio AL, MacEwen K, Friedlander J, Blitzblau HG, Hamilton MA, Crabtree DV, Su A, Afshar J, Sullivan JE, LaTouf WG, South CR, Greenhagen EH, Shaw AJ, Brevnova EE.

Biotechnol Biofuels. 2018 May 9;11:131. doi: 10.1186/s13068-018-1131-y. eCollection 2018.


High sensitivity 8-color flow cytometry assay for paroxysmal nocturnal hemoglobinuria granulocyte and monocyte detections.

Chan RC, Leung RH, Posadas A, Lorey TS, Shaw AJ.

Biomed Rep. 2018 Mar;8(3):224-234. doi: 10.3892/br.2018.1047. Epub 2018 Jan 24.


The efficacy of downhill running as a method to enhance running economy in trained distance runners.

Shaw AJ, Ingham SA, Folland JP.

Eur J Sport Sci. 2018 Jun;18(5):630-638. doi: 10.1080/17461391.2018.1449892. Epub 2018 Mar 21.


A novel experimental system using the liverwort Marchantia polymorpha and its fungal endophytes reveals diverse and context-dependent effects.

Nelson JM, Hauser DA, Hinson R, Shaw AJ.

New Phytol. 2018 May;218(3):1217-1232. doi: 10.1111/nph.15012. Epub 2018 Feb 7.


The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project.

Weston DJ, Turetsky MR, Johnson MG, Granath G, Lindo Z, Belyea LR, Rice SK, Hanson DT, Engelhardt KAM, Schmutz J, Dorrepaal E, Euskirchen ES, Stenøien HK, Szövényi P, Jackson M, Piatkowski BT, Muchero W, Norby RJ, Kostka JE, Glass JB, Rydin H, Limpens J, Tuittila ES, Ullrich KK, Carrell A, Benscoter BW, Chen JG, Oke TA, Nilsson MB, Ranjan P, Jacobson D, Lilleskov EA, Clymo RS, Shaw AJ.

New Phytol. 2018 Jan;217(1):16-25. doi: 10.1111/nph.14860. Epub 2017 Oct 27.


Lee Silverman Voice Treatment (LSVT)-BIG to improve motor function in people with Parkinson's disease: a systematic review and meta-analysis.

McDonnell MN, Rischbieth B, Schammer TT, Seaforth C, Shaw AJ, Phillips AC.

Clin Rehabil. 2018 May;32(5):607-618. doi: 10.1177/0269215517734385. Epub 2017 Oct 5.


Divergent evolution and niche differentiation within the common peatmoss Sphagnum magellanicum.

Yousefi N, Hassel K, Flatberg KI, Kemppainen P, Trucchi E, Shaw AJ, Kyrkjeeide MO, Szövényi P, Stenøien HK.

Am J Bot. 2017 Jul;104(7):1060-1072. doi: 10.3732/ajb.1700163.


Species delimitation and biogeography of a southern hemisphere liverwort clade, Frullania subgenus Microfrullania (Frullaniaceae, Marchantiophyta).

Carter BE, Larraín J, Manukjanová A, Shaw B, Shaw AJ, Heinrichs J, de Lange P, Suleiman M, Thouvenot L, von Konrat M.

Mol Phylogenet Evol. 2017 Feb;107:16-26. doi: 10.1016/j.ympev.2016.10.002. Epub 2016 Oct 13.


Range size heritability and diversification patterns in the liverwort genus Radula.

Patiño J, Wang J, Renner MAM, Gradstein SR, Laenen B, Devos N, Shaw AJ, Vanderpoorten A.

Mol Phylogenet Evol. 2017 Jan;106:73-85. doi: 10.1016/j.ympev.2016.09.020. Epub 2016 Sep 21.


Metabolic engineering of microbial competitive advantage for industrial fermentation processes.

Shaw AJ, Lam FH, Hamilton M, Consiglio A, MacEwen K, Brevnova EE, Greenhagen E, LaTouf WG, South CR, van Dijken H, Stephanopoulos G.

Science. 2016 Aug 5;353(6299):583-6. doi: 10.1126/science.aaf6159.


HybPiper: Extracting coding sequence and introns for phylogenetics from high-throughput sequencing reads using target enrichment.

Johnson MG, Gardner EM, Liu Y, Medina R, Goffinet B, Shaw AJ, Zerega NJ, Wickett NJ.

Appl Plant Sci. 2016 Jul 12;4(7). pii: apps.1600016. doi: 10.3732/apps.1600016. eCollection 2016 Jul.


The Sphagnum microbiome: new insights from an ancient plant lineage.

Kostka JE, Weston DJ, Glass JB, Lilleskov EA, Shaw AJ, Turetsky MR.

New Phytol. 2016 Jul;211(1):57-64. doi: 10.1111/nph.13993. Epub 2016 May 13. Review.


Increased diversification rates follow shifts to bisexuality in liverworts.

Laenen B, Machac A, Gradstein SR, Shaw B, Patiño J, Désamoré A, Goffinet B, Cox CJ, Shaw AJ, Vanderpoorten A.

New Phytol. 2016 May;210(3):1121-9. doi: 10.1111/nph.13835. Epub 2016 Feb 1.


Endemism in the moss flora of North America.

Carter BE, Shaw B, Shaw AJ.

Am J Bot. 2016 Apr;103(4):769-79. doi: 10.3732/ajb.1500484. Epub 2016 Apr 7.


Crystal Structure of a Complex of Surfactant Protein D (SP-D) and Haemophilus influenzae Lipopolysaccharide Reveals Shielding of Core Structures in SP-D-Resistant Strains.

Clark HW, Mackay RM, Deadman ME, Hood DW, Madsen J, Moxon ER, Townsend JP, Reid KBM, Ahmed A, Shaw AJ, Greenhough TJ, Shrive AK.

Infect Immun. 2016 Apr 22;84(5):1585-1592. doi: 10.1128/IAI.01239-15. Print 2016 May.


Analyses of transcriptome sequences reveal multiple ancient large-scale duplication events in the ancestor of Sphagnopsida (Bryophyta).

Devos N, Szövényi P, Weston DJ, Rothfels CJ, Johnson MG, Shaw AJ.

New Phytol. 2016 Jul;211(1):300-18. doi: 10.1111/nph.13887. Epub 2016 Feb 22.


Spatial Genetic Structure of the Abundant and Widespread Peatmoss Sphagnum magellanicum Brid.

Kyrkjeeide MO, Hassel K, Flatberg KI, Shaw AJ, Yousefi N, Stenøien HK.

PLoS One. 2016 Feb 9;11(2):e0148447. doi: 10.1371/journal.pone.0148447. eCollection 2016.


A phylotranscriptomic analysis of gene family expansion and evolution in the largest order of pleurocarpous mosses (Hypnales, Bryophyta).

Johnson MG, Malley C, Goffinet B, Shaw AJ, Wickett NJ.

Mol Phylogenet Evol. 2016 May;98:29-40. doi: 10.1016/j.ympev.2016.01.008. Epub 2016 Jan 23.


Improved Gene Targeting through Cell Cycle Synchronization.

Tsakraklides V, Brevnova E, Stephanopoulos G, Shaw AJ.

PLoS One. 2015 Jul 20;10(7):e0133434. doi: 10.1371/journal.pone.0133434. eCollection 2015.


Genome-scale resources for Thermoanaerobacterium saccharolyticum.

Currie DH, Raman B, Gowen CM, Tschaplinski TJ, Land ML, Brown SD, Covalla SF, Klingeman DM, Yang ZK, Engle NL, Johnson CM, Rodriguez M, Shaw AJ, Kenealy WR, Lynd LR, Fong SS, Mielenz JR, Davison BH, Hogsett DA, Herring CD.

BMC Syst Biol. 2015 Jun 26;9:30. doi: 10.1186/s12918-015-0159-x.


Cofactor Specificity of the Bifunctional Alcohol and Aldehyde Dehydrogenase (AdhE) in Wild-Type and Mutant Clostridium thermocellum and Thermoanaerobacterium saccharolyticum.

Zheng T, Olson DG, Tian L, Bomble YJ, Himmel ME, Lo J, Hon S, Shaw AJ, van Dijken JP, Lynd LR.

J Bacteriol. 2015 Aug 1;197(15):2610-9. doi: 10.1128/JB.00232-15. Epub 2015 May 26.


The correlation between running economy and maximal oxygen uptake: cross-sectional and longitudinal relationships in highly trained distance runners.

Shaw AJ, Ingham SA, Atkinson G, Folland JP.

PLoS One. 2015 Apr 7;10(4):e0123101. doi: 10.1371/journal.pone.0123101. eCollection 2015.


Approximate Bayesian Computation Reveals the Crucial Role of Oceanic Islands for the Assembly of Continental Biodiversity.

Patiño J, Carine M, Mardulyn P, Devos N, Mateo RG, González-Mancebo JM, Shaw AJ, Vanderpoorten A.

Syst Biol. 2015 Jul;64(4):579-89. doi: 10.1093/sysbio/syv013. Epub 2015 Feb 20.


Anaerobic detoxification of acetic acid in a thermophilic ethanologen.

Shaw AJ, Miller BB, Rogers SR, Kenealy WR, Meola A, Bhandiwad A, Sillers WR, Shikhare I, Hogsett DA, Herring CD.

Biotechnol Biofuels. 2015 May 9;8:75. doi: 10.1186/s13068-015-0257-4. eCollection 2015.


A 2,2'-bipyridine coordination complex of [ICl₂]⁺.

Shaw AJ, Corbo R, Wilson DJ, Dutton JL.

Dalton Trans. 2015 Sep 14;44(34):15083-7. doi: 10.1039/c4dt03549f.


Phylotranscriptomic analysis of the origin and early diversification of land plants.

Wickett NJ, Mirarab S, Nguyen N, Warnow T, Carpenter E, Matasci N, Ayyampalayam S, Barker MS, Burleigh JG, Gitzendanner MA, Ruhfel BR, Wafula E, Der JP, Graham SW, Mathews S, Melkonian M, Soltis DE, Soltis PS, Miles NW, Rothfels CJ, Pokorny L, Shaw AJ, DeGironimo L, Stevenson DW, Surek B, Villarreal JC, Roure B, Philippe H, dePamphilis CW, Chen T, Deyholos MK, Baucom RS, Kutchan TM, Augustin MM, Wang J, Zhang Y, Tian Z, Yan Z, Wu X, Sun X, Wong GK, Leebens-Mack J.

Proc Natl Acad Sci U S A. 2014 Nov 11;111(45):E4859-68. doi: 10.1073/pnas.1323926111. Epub 2014 Oct 29.


Extant diversity of bryophytes emerged from successive post-Mesozoic diversification bursts.

Laenen B, Shaw B, Schneider H, Goffinet B, Paradis E, Désamoré A, Heinrichs J, Villarreal JC, Gradstein SR, McDaniel SF, Long DG, Forrest LL, Hollingsworth ML, Crandall-Stotler B, Davis EC, Engel J, Von Konrat M, Cooper ED, Patiño J, Cox CJ, Vanderpoorten A, Shaw AJ.

Nat Commun. 2014 Oct 27;5:5134. doi: 10.1038/ncomms6134.


Evolution of niche preference in Sphagnum peat mosses.

Johnson MG, Granath G, Tahvanainen T, Pouliot R, Stenøien HK, Rochefort L, Rydin H, Shaw AJ.

Evolution. 2015 Jan;69(1):90-103. doi: 10.1111/evo.12547. Epub 2014 Dec 16.


Impaired gamma delta T cell-derived IL-17A and inflammasome activation during early respiratory syncytial virus infection in infants.

Huang H, Saravia J, You D, Shaw AJ, Cormier SA.

Immunol Cell Biol. 2015 Feb;93(2):126-35. doi: 10.1038/icb.2014.79. Epub 2014 Sep 30.


Sphagnum physiology in the context of changing climate: emergent influences of genomics, modelling and host-microbiome interactions on understanding ecosystem function.

Weston DJ, Timm CM, Walker AP, Gu L, Muchero W, Schmutz J, Shaw AJ, Tuskan GA, Warren JM, Wullschleger SD.

Plant Cell Environ. 2015 Sep;38(9):1737-51. doi: 10.1111/pce.12458. Epub 2014 Dec 7. Review.


Evaluation of extractables in processed and unprocessed polymer materials used for pharmaceutical applications.

Stults CL, Ansell JM, Shaw AJ, Nagao LM.

AAPS PharmSciTech. 2015 Feb;16(1):150-64. doi: 10.1208/s12249-014-0188-6. Epub 2014 Sep 17.


Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns.

Li FW, Villarreal JC, Kelly S, Rothfels CJ, Melkonian M, Frangedakis E, Ruhsam M, Sigel EM, Der JP, Pittermann J, Burge DO, Pokorny L, Larsson A, Chen T, Weststrand S, Thomas P, Carpenter E, Zhang Y, Tian Z, Chen L, Yan Z, Zhu Y, Sun X, Wang J, Stevenson DW, Crandall-Stotler BJ, Shaw AJ, Deyholos MK, Soltis DE, Graham SW, Windham MD, Langdale JA, Wong GK, Mathews S, Pryer KM.

Proc Natl Acad Sci U S A. 2014 May 6;111(18):6672-7. doi: 10.1073/pnas.1319929111. Epub 2014 Apr 14.


The self-prescribed use of aromatherapy oils by pregnant women.

Sibbritt DW, Catling CJ, Adams J, Shaw AJ, Homer CS.

Women Birth. 2014 Mar;27(1):41-5. doi: 10.1016/j.wombi.2013.09.005. Epub 2013 Oct 25.


The valid measurement of running economy in runners.

Shaw AJ, Ingham SA, Folland JP.

Med Sci Sports Exerc. 2014 Oct;46(10):1968-73. doi: 10.1249/MSS.0000000000000311.


Gestalt principle use in college students, children with autism, toddlers (Homo sapiens), and cotton top tamarins (Saguinus oedipus).

Neiworth JJ, Whillock KM, Kim SH, Greenberg JR, Jones KB, Patel AR, Steefel-Moore DL, Shaw AJ, Rupert DD, Gauer JL, Kudura AG.

J Comp Psychol. 2014 May;128(2):188-98. doi: 10.1037/a0034840. Epub 2014 Feb 3.


Crystal structure of the tetrameric fibrinogen-like recognition domain of fibrinogen C domain containing 1 (FIBCD1) protein.

Shrive AK, Moeller JB, Burns I, Paterson JM, Shaw AJ, Schlosser A, Sorensen GL, Greenhough TJ, Holmskov U.

J Biol Chem. 2014 Jan 31;289(5):2880-7. doi: 10.1074/jbc.M113.520577. Epub 2013 Nov 28.


Metabolic engineering of Thermoanaerobacterium saccharolyticum for n-butanol production.

Bhandiwad A, Shaw AJ, Guss A, Guseva A, Bahl H, Lynd LR.

Metab Eng. 2014 Jan;21:17-25. doi: 10.1016/j.ymben.2013.10.012. Epub 2013 Nov 9.


The reliability of running economy expressed as oxygen cost and energy cost in trained distance runners.

Shaw AJ, Ingham SA, Fudge BW, Folland JP.

Appl Physiol Nutr Metab. 2013 Dec;38(12):1268-72. doi: 10.1139/apnm-2013-0055. Epub 2013 Jun 26.


Origins, genetic structure, and systematics of the narrow endemic peatmosses (Sphagnum): S. guwassanense and S. triseriporum (Sphagnaceae).

Shaw AJ, Shaw B, Johnson MG, Higuchi M, Arikawa T, Ueno T, Devos N.

Am J Bot. 2013 Jun;100(6):1202-20. doi: 10.3732/ajb.1200630. Epub 2013 May 29.


The influence of exercise training status on antigen-stimulated IL-10 production in whole blood culture and numbers of circulating regulatory T cells.

Handzlik MK, Shaw AJ, Dungey M, Bishop NC, Gleeson M.

Eur J Appl Physiol. 2013 Jul;113(7):1839-48. doi: 10.1007/s00421-013-2614-y. Epub 2013 Feb 23.


Carbon catabolite repression in Thermoanaerobacterium saccharolyticum.

Tsakraklides V, Shaw AJ, Miller BB, Hogsett DA, Herring CD.

Biotechnol Biofuels. 2012 Nov 26;5(1):85. doi: 10.1186/1754-6834-5-85.


Long-distance dispersal and genetic structure of natural populations: an assessment of the inverse isolation hypothesis in peat mosses.

Szövényi P, Sundberg S, Shaw AJ.

Mol Ecol. 2012 Nov;21(22):5461-72. doi: 10.1111/mec.12055. Epub 2012 Oct 12.


Using optical coherence tomography to assess corneoscleral morphology after soft contact lens wear.

Alonso-Caneiro D, Shaw AJ, Collins MJ.

Optom Vis Sci. 2012 Nov;89(11):1619-26. doi: 10.1097/OPX.0b013e31826c5f63.


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