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Items: 1 to 50 of 175

1.

The active role of spermatozoa in transgenerational inheritance.

Sciamanna I, Serafino A, Shapiro JA, Spadafora C.

Proc Biol Sci. 2019 Aug 28;286(1909):20191263. doi: 10.1098/rspb.2019.1263. Epub 2019 Aug 28.

2.

Effectiveness and cost of organized outreach for colorectal cancer screening: A Randomized Controlled Trial.

Somsouk M, Rachocki C, Mannalithara A, Garcia D, Laleau V, Grimes B, Issaka RB, Chen E, Vittinghoff E, Shapiro JA, Ladabaum U.

J Natl Cancer Inst. 2019 Jun 12. pii: djz110. doi: 10.1093/jnci/djz110. [Epub ahead of print]

PMID:
31187126
3.

Variations in Screening Quality in a Federal Colorectal Cancer Screening Program for the Uninsured.

Nadel MR, Royalty J, Joseph D, Rockwell T, Helsel W, Kammerer W, Gray SC, Shapiro JA.

Prev Chronic Dis. 2019 May 30;16:E67. doi: 10.5888/pcd16.180452.

4.

Understand the genomic diversity and evolution of fungal pathogen Candida glabrata by genome-wide analysis of genetic variations.

Guo X, Zhang R, Li Y, Wang Z, Ishchuk OP, Ahmad KM, Wee J, Piskur J, Shapiro JA, Gu Z.

Methods. 2019 May 3. pii: S1046-2023(18)30469-9. doi: 10.1016/j.ymeth.2019.05.002. [Epub ahead of print]

PMID:
31059831
5.

Connecting iron acquisition and biofilm formation in the ESKAPE pathogens as a strategy for combatting antibiotic resistance.

Post SJ, Shapiro JA, Wuest WM.

Medchemcomm. 2019 Mar 21;10(4):505-512. doi: 10.1039/c9md00032a. eCollection 2019 Apr 1. Review.

PMID:
31057729
6.

No genome is an island: toward a 21st century agenda for evolution.

Shapiro JA.

Ann N Y Acad Sci. 2019 Jul;1447(1):21-52. doi: 10.1111/nyas.14044. Epub 2019 Mar 22. Review.

PMID:
30900279
7.

Systemic cobaltism manifesting as oral mucosal discoloration and metallic gustation after metal-on-metal hip resurfacing.

Shapiro JA, Eskildsen SM, Del Gaizo DJ.

Arthroplast Today. 2018 Aug 16;4(4):436-440. doi: 10.1016/j.artd.2018.06.005. eCollection 2018 Dec.

8.

Low Literacy Level Instructions and Reminder Calls Improve Patient Handling of Fecal Immunochemical Test Samples.

Wang A, Rachocki C, Shapiro JA, Issaka RB, Somsouk M.

Clin Gastroenterol Hepatol. 2019 Aug;17(9):1822-1828. doi: 10.1016/j.cgh.2018.11.050. Epub 2018 Nov 29.

PMID:
30503967
9.

Crystal Structure of the Siderophore Binding Protein BauB Bound to an Unusual 2:1 Complex Between Acinetobactin and Ferric Iron.

Bailey DC, Bohac TJ, Shapiro JA, Giblin DE, Wencewicz TA, Gulick AM.

Biochemistry. 2018 Dec 4;57(48):6653-6661. doi: 10.1021/acs.biochem.8b00986. Epub 2018 Nov 15.

PMID:
30406986
10.

Identification of Specific and Nonspecific Inhibitors of Bacillus anthracis Type III Pantothenate Kinase (PanK).

Shapiro JA, Varga JJ, Parsonage D, Walton W, Redinbo MR, Ross LJ, White EL, Bostwick R, Wuest WM, Claiborne A, Goldberg JB.

ChemMedChem. 2019 Jan 8;14(1):78-82. doi: 10.1002/cmdc.201800652. Epub 2018 Dec 3.

PMID:
30376607
11.

Biologically Inspired Total Synthesis of Ulbactin F, an Iron-Binding Natural Product.

Shapiro JA, Morrison KR, Chodisetty SS, Musaev DG, Wuest WM.

Org Lett. 2018 Sep 21;20(18):5922-5926. doi: 10.1021/acs.orglett.8b02599. Epub 2018 Sep 10.

12.

Impact of Colonoscopy Bowel Preparation Quality on Follow-up Interval Recommendations for Average-risk Patients With Normal Screening Colonoscopies: Data From the New Hampshire Colonoscopy Registry.

Butterly LF, Nadel MR, Anderson JC, Robinson CM, Weiss JE, Lieberman D, Shapiro JA.

J Clin Gastroenterol. 2018 Aug 13. doi: 10.1097/MCG.0000000000001115. [Epub ahead of print]

PMID:
30106836
13.

From General to Specific: Can Pseudomonas Primary Metabolism Be Exploited for Narrow-Spectrum Antibiotics?

Shapiro JA, Kaplan AR, Wuest WM.

Chembiochem. 2019 Jan 2;20(1):34-39. doi: 10.1002/cbic.201800383. Epub 2018 Sep 21.

PMID:
30088315
14.

A taxonomic signature of obesity in a large study of American adults.

Peters BA, Shapiro JA, Church TR, Miller G, Trinh-Shevrin C, Yuen E, Friedlander C, Hayes RB, Ahn J.

Sci Rep. 2018 Jun 27;8(1):9749. doi: 10.1038/s41598-018-28126-1.

15.

Colorectal cancer screening in the United States: Trends from 2008 to 2015 and variation by health insurance coverage.

de Moor JS, Cohen RA, Shapiro JA, Nadel MR, Sabatino SA, Robin Yabroff K, Fedewa S, Lee R, Paul Doria-Rose V, Altice C, Klabunde CN.

Prev Med. 2018 Jul;112:199-206. doi: 10.1016/j.ypmed.2018.05.001. Epub 2018 May 3.

16.

A novel learning algorithm to predict individual survival after liver transplantation for primary sclerosing cholangitis.

Andres A, Montano-Loza A, Greiner R, Uhlich M, Jin P, Hoehn B, Bigam D, Shapiro JAM, Kneteman NM.

PLoS One. 2018 Mar 15;13(3):e0193523. doi: 10.1371/journal.pone.0193523. eCollection 2018.

17.

Single-cell analyses of human islet cells reveal de-differentiation signatures.

Teo AKK, Lim CS, Cheow LF, Kin T, Shapiro JA, Kang NY, Burkholder W, Lau HH.

Cell Death Discov. 2018 Feb 9;4:14. doi: 10.1038/s41420-017-0014-5. eCollection 2018 Dec.

18.

Living Organisms Author Their Read-Write Genomes in Evolution.

Shapiro JA.

Biology (Basel). 2017 Dec 6;6(4). pii: E42. doi: 10.3390/biology6040042. Review.

19.

A Comparison of Fecal Immunochemical and High-Sensitivity Guaiac Tests for Colorectal Cancer Screening.

Shapiro JA, Bobo JK, Church TR, Rex DK, Chovnick G, Thompson TD, Zauber AG, Lieberman D, Levin TR, Joseph DA, Nadel MR.

Am J Gastroenterol. 2017 Nov;112(11):1728-1735. doi: 10.1038/ajg.2017.285. Epub 2017 Oct 10.

20.

Rigid Oxazole Acinetobactin Analog Blocks Siderophore Cycling in Acinetobacter baumannii.

Bohac TJ, Shapiro JA, Wencewicz TA.

ACS Infect Dis. 2017 Nov 10;3(11):802-806. doi: 10.1021/acsinfecdis.7b00146. Epub 2017 Oct 12.

PMID:
28991447
21.

Biological action in Read-Write genome evolution.

Shapiro JA.

Interface Focus. 2017 Oct 6;7(5):20160115. doi: 10.1098/rsfs.2016.0115. Epub 2017 Aug 18. Review.

22.

Structure-function studies of acinetobactin analogs.

Shapiro JA, Wencewicz TA.

Metallomics. 2017 May 24;9(5):463-470. doi: 10.1039/c7mt00064b.

PMID:
28440833
23.

Erratum to: The gut microbiota in conventional and serrated precursors of colorectal cancer.

Peters BA, Dominianni C, Shapiro JA, Church TR, Wu J, Miller G, Yuen E, Freiman H, Lustbader I, Salik J, Friedlander C, Hayes RB, Ahn J.

Microbiome. 2017 Mar 6;5(1):29. doi: 10.1186/s40168-017-0238-x. No abstract available.

24.

The gut microbiota in conventional and serrated precursors of colorectal cancer.

Peters BA, Dominianni C, Shapiro JA, Church TR, Wu J, Miller G, Yuen E, Freiman H, Lustbader I, Salik J, Friedlander C, Hayes RB, Ahn J.

Microbiome. 2016 Dec 30;4(1):69. doi: 10.1186/s40168-016-0218-6. Erratum in: Microbiome. 2017 Mar 6;5(1):29.

25.

Acinetobactin Isomerization Enables Adaptive Iron Acquisition in Acinetobacter baumannii through pH-Triggered Siderophore Swapping.

Shapiro JA, Wencewicz TA.

ACS Infect Dis. 2016 Feb 12;2(2):157-68. doi: 10.1021/acsinfecdis.5b00145. Epub 2015 Dec 23.

PMID:
27624967
26.

Exploring the read-write genome: mobile DNA and mammalian adaptation.

Shapiro JA.

Crit Rev Biochem Mol Biol. 2017 Feb;52(1):1-17. doi: 10.1080/10409238.2016.1226748. Epub 2016 Sep 7. Review.

PMID:
27599542
27.

Nothing in Evolution Makes Sense Except in the Light of Genomics: Read-Write Genome Evolution as an Active Biological Process.

Shapiro JA.

Biology (Basel). 2016 Jun 8;5(2). pii: E27. doi: 10.3390/biology5020027. Review.

28.

Biomechanical Assessment of Patellar Advancement Procedures for Patella Alta.

Seidl A, Baldini T, Krughoff K, Shapiro JA, Lindeque B, Rhodes J, Carollo J.

Orthopedics. 2016 May 1;39(3):e492-7. doi: 10.3928/01477447-20160427-04. Epub 2016 May 2.

PMID:
27135457
29.

Sorcin Links Pancreatic β-Cell Lipotoxicity to ER Ca2+ Stores.

Marmugi A, Parnis J, Chen X, Carmichael L, Hardy J, Mannan N, Marchetti P, Piemonti L, Bosco D, Johnson P, Shapiro JA, Cruciani-Guglielmacci C, Magnan C, Ibberson M, Thorens B, Valdivia HH, Rutter GA, Leclerc I.

Diabetes. 2016 Apr;65(4):1009-21. doi: 10.2337/db15-1334. Epub 2016 Jan 28.

30.

The basic concept of the read-write genome: Mini-review on cell-mediated DNA modification.

Shapiro JA.

Biosystems. 2016 Feb;140:35-7. doi: 10.1016/j.biosystems.2015.11.003. Epub 2015 Nov 10. Review.

PMID:
26571358
31.

Draft Genome Sequence of Exiguobacterium sp. Strain BMC-KP, an Environmental Isolate from Bryn Mawr, Pennsylvania.

Hyson P, Shapiro JA, Wien MW.

Genome Announc. 2015 Oct 8;3(5). pii: e01164-15. doi: 10.1128/genomeA.01164-15.

32.

Elaine Dewar's Smarts-one journalist's search for the various meanings and mechanisms of natural and artificial intelligence.

Shapiro JA.

Plant Signal Behav. 2015 Aug 3;10(8):e1052200. doi: 10.1080/15592324.2015.1052200. No abstract available.

33.

Two amino acid sequences direct Aspergillus nidulans protein kinase C (PkcA) localization to hyphal apices and septation sites.

Jackson-Hayes L, Hill TW, Loprete DM, DelBove CE, Shapiro JA, Henley JL, Dawodu OO.

Mycologia. 2015 May-Jun;107(3):452-9. doi: 10.3852/14-217. Epub 2015 Feb 27.

PMID:
25724996
34.

Colorectal Cancer Screening in US Seniors Ages 76-84 Years.

Klabunde CN, Shapiro JA, Kobrin S, Nadel MR, Zapka JM.

J Community Health. 2015 Aug;40(4):769-79. doi: 10.1007/s10900-015-9998-z.

35.

RNA-Seq analysis reveals a six-gene SoxR regulon in Streptomyces coelicolor.

Naseer N, Shapiro JA, Chander M.

PLoS One. 2014 Aug 27;9(8):e106181. doi: 10.1371/journal.pone.0106181. eCollection 2014.

36.

Physiology of the read-write genome.

Shapiro JA.

J Physiol. 2014 Jun 1;592(11):2319-41. doi: 10.1113/jphysiol.2014.271130. Review.

37.

Epigenetic control of mobile DNA as an interface between experience and genome change.

Shapiro JA.

Front Genet. 2014 Apr 25;5:87. doi: 10.3389/fgene.2014.00087. eCollection 2014. Review.

38.

Constraint and opportunity in genome innovation.

Shapiro JA.

RNA Biol. 2014;11(3):186-96. doi: 10.4161/rna.27506. Epub 2013 Dec 20. Review.

39.

Fulminant hepatic failure necessitating transplantation following the initiation of infliximab therapy: a cautionary tale times two.

Rowe BW, Gala-Lopez B, Tomlinson C, Girgis S, Shapiro JA.

Transpl Int. 2013 Dec;26(12):e110-2. doi: 10.1111/tri.12185. Epub 2013 Sep 16. No abstract available.

40.

Implications of the Read-Write Genome view.

Shapiro JA.

Phys Life Rev. 2013 Sep;10(3):347-50. doi: 10.1016/j.plrev.2013.07.013. Epub 2013 Aug 6. No abstract available.

PMID:
23988879
41.

How life changes itself: the Read-Write (RW) genome.

Shapiro JA.

Phys Life Rev. 2013 Sep;10(3):287-323. doi: 10.1016/j.plrev.2013.07.001. Epub 2013 Jul 8. Review.

PMID:
23876611
42.

Assessing screening quality in the CDC's Colorectal Cancer Screening Demonstration Program.

Nadel MR, Royalty J, Shapiro JA, Joseph D, Seeff LC, Lane DS, Dwyer DM.

Cancer. 2013 Aug 1;119 Suppl 15:2834-41. doi: 10.1002/cncr.28164.

43.

Rethinking the (im)possible in evolution.

Shapiro JA.

Prog Biophys Mol Biol. 2013 Apr;111(2-3):92-6. doi: 10.1016/j.pbiomolbio.2012.08.016. Epub 2012 Sep 14.

PMID:
22986107
44.

Patterns of colorectal cancer test use, including CT colonography, in the 2010 National Health Interview Survey.

Shapiro JA, Klabunde CN, Thompson TD, Nadel MR, Seeff LC, White A.

Cancer Epidemiol Biomarkers Prev. 2012 Jun;21(6):895-904. doi: 10.1158/1055-9965.EPI-12-0192. Epub 2012 Apr 6.

45.

Recruitment for the National Breast and Cervical Cancer Early Detection Program.

Escoffery CT, Kegler MC, Glanz K, Graham TD, Blake SC, Shapiro JA, Mullen PD, Fernandez ME.

Am J Prev Med. 2012 Mar;42(3):235-41. doi: 10.1016/j.amepre.2011.11.001.

PMID:
22341160
46.

Natural variation in a chloride channel subunit confers avermectin resistance in C. elegans.

Ghosh R, Andersen EC, Shapiro JA, Gerke JP, Kruglyak L.

Science. 2012 Feb 3;335(6068):574-8. doi: 10.1126/science.1214318.

47.

Chromosome-scale selective sweeps shape Caenorhabditis elegans genomic diversity.

Andersen EC, Gerke JP, Shapiro JA, Crissman JR, Ghosh R, Bloom JS, Félix MA, Kruglyak L.

Nat Genet. 2012 Jan 29;44(3):285-90. doi: 10.1038/ng.1050.

48.

High brachial artery bifurcation: clinical considerations and practical implications for an arteriovenous access.

Kian K, Shapiro JA, Salman L, Khan RA, Merrill D, Garcia L, Eid N, Asif A, Aldahan A, Beathard G.

Semin Dial. 2012 Mar-Apr;25(2):244-7. doi: 10.1111/j.1525-139X.2011.00964.x. Epub 2011 Sep 19.

PMID:
21929569
49.

Evidence for persisters in Staphylococcus epidermidis RP62a planktonic cultures and biofilms.

Shapiro JA, Nguyen VL, Chamberlain NR.

J Med Microbiol. 2011 Jul;60(Pt 7):950-60. doi: 10.1099/jmm.0.026013-0. Epub 2011 Mar 17.

PMID:
21415203
50.

Genome-wide misexpression of X-linked versus autosomal genes associated with hybrid male sterility.

Lu X, Shapiro JA, Ting CT, Li Y, Li C, Xu J, Huang H, Cheng YJ, Greenberg AJ, Li SH, Wu ML, Shen Y, Wu CI.

Genome Res. 2010 Aug;20(8):1097-102. doi: 10.1101/gr.076620.108. Epub 2010 May 28.

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