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Items: 1 to 50 of 195

1.

Daratumumab at the frontiers of post-transplant refractory T-acute lymphoblastic leukemia-a worthwhile strategy?

Bonda A, Punatar S, Gokarn A, Mohite A, Shanmugam K, Nayak L, Bopanna M, Cheriyalinkal Parambil B, Khattry N.

Bone Marrow Transplant. 2018 Jun 8. doi: 10.1038/s41409-018-0222-5. [Epub ahead of print] No abstract available.

PMID:
29884853
2.
3.

Fermentation of dihydroxyacetone by engineered Escherichia coli and Klebsiella variicola to products.

Wang L, Chauliac D, Rhee MS, Panneerselvam A, Ingram LO, Shanmugam KT.

Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):4381-4386. doi: 10.1073/pnas.1801002115. Epub 2018 Apr 9.

PMID:
29632200
4.

Phosphoric acid based pretreatment of switchgrass and fermentation of entire slurry to ethanol using a simplified process.

Wu W, Rondon V, Weeks K, Pullammanappallil P, Ingram LO, Shanmugam KT.

Bioresour Technol. 2018 Mar;251:171-180. doi: 10.1016/j.biortech.2017.12.041. Epub 2017 Dec 16.

PMID:
29274857
5.

Metabolic engineering of Bacillus subtilis for production of D-lactic acid.

Awasthi D, Wang L, Rhee MS, Wang Q, Chauliac D, Ingram LO, Shanmugam KT.

Biotechnol Bioeng. 2018 Feb;115(2):453-463. doi: 10.1002/bit.26472. Epub 2017 Oct 30.

PMID:
28986980
6.

Sodium Thiosulfate Preconditioning Ameliorates Ischemia/Reperfusion Injury in Rat Hearts Via Reduction of Oxidative Stress and Apoptosis.

Ravindran S, Boovarahan SR, Shanmugam K, Vedarathinam RC, Kurian GA.

Cardiovasc Drugs Ther. 2017 Dec;31(5-6):511-524. doi: 10.1007/s10557-017-6751-0.

PMID:
28965151
7.

Exploratory Studies of (-)-Epicatechin, a Bioactive Compound of Phyllanthus niruri, on the Antioxidant Enzymes and Oxidative Stress Markers in D-galactosamine-induced Hepatitis in Rats: A Study with Reference to Clinical Prospective.

Shanmugam B, Shanmugam KR, Ravi S, Subbaiah GV, Ramakrishana C, Mallikarjuna K, Reddy KS.

Pharmacogn Mag. 2017 Jan;13(Suppl 1):S56-S62. doi: 10.4103/0973-1296.203973. Epub 2017 Apr 7.

8.

Prognostic value of MACC1 and proficient mismatch repair status for recurrence risk prediction in stage II colon cancer patients: the BIOGRID studies.

Rohr UP, Herrmann P, Ilm K, Zhang H, Lohmann S, Reiser A, Muranyi A, Smith J, Burock S, Osterland M, Leith K, Singh S, Brunhoeber P, Bowermaster R, Tie J, Christie M, Wong HL, Waring P, Shanmugam K, Gibbs P, Stein U.

Ann Oncol. 2017 Aug 1;28(8):1869-1875. doi: 10.1093/annonc/mdx207.

PMID:
28460000
9.

Expression of heterologous oxalate decarboxylase in HEK293 cells confers protection against oxalate induced oxidative stress as a therapeutic approach for calcium oxalate stone disease.

Albert A, Tiwari V, Paul E, Ganesan D, Ayyavu M, Kujur R, Ponnusamy S, Shanmugam K, Saso L, Govindan Sadasivam S.

J Enzyme Inhib Med Chem. 2017 Dec;32(1):426-433. doi: 10.1080/14756366.2016.1256884.

10.

Girdin (GIV) Expression as a Prognostic Marker of Recurrence in Mismatch Repair-Proficient Stage II Colon Cancer.

Ghosh P, Tie J, Muranyi A, Singh S, Brunhoeber P, Leith K, Bowermaster R, Liao Z, Zhu Y, LaFleur B, Tran B, Desai J, Jones I, Croxford M, Jover R, Goel A, Waring P, Hu S, Teichgraber V, Rohr UP, Ridder R, Shanmugam K, Gibbs P.

Clin Cancer Res. 2016 Jul 15;22(14):3488-98. doi: 10.1158/1078-0432.CCR-15-2290. Epub 2016 Mar 30.

11.

A Dynamic Probabilistic Based Broadcasting Scheme for MANETs.

Shanmugam K, Subburathinam K, Palanisamy AV.

ScientificWorldJournal. 2016;2016:1832026. doi: 10.1155/2016/1832026. Epub 2016 Feb 25.

12.

Techno-economic analysis of ethanol production from sugarcane bagasse using a Liquefaction plus Simultaneous Saccharification and co-Fermentation process.

Gubicza K, Nieves IU, Sagues WJ, Barta Z, Shanmugam KT, Ingram LO.

Bioresour Technol. 2016 May;208:42-48. doi: 10.1016/j.biortech.2016.01.093. Epub 2016 Feb 1.

PMID:
26918837
13.
14.

Fermentation of sweet sorghum derived sugars to butyric acid at high titer and productivity by a moderate thermophile Clostridium thermobutyricum at 50°C.

Wang L, Ou MS, Nieves I, Erickson JE, Vermerris W, Ingram LO, Shanmugam KT.

Bioresour Technol. 2015 Dec;198:533-9. doi: 10.1016/j.biortech.2015.09.062. Epub 2015 Sep 26.

PMID:
26432057
15.

Removing chiral contamination of lactate solutions by selective metabolism of the D-enantiomer.

Chauliac D, Pullammanappallil PC, Ingram LO, Shanmugam KT.

Biotechnol Lett. 2015 Dec;37(12):2411-8. doi: 10.1007/s10529-015-1924-z. Epub 2015 Aug 14.

PMID:
26272390
16.

Pseudoepitheliomatous Hyperplasia: Relevance in Oral Pathology.

Sarangarajan R, Vedam VK, Sivadas G, Krishnaraj R, Sarangarajan A, Shanmugam KT.

J Int Oral Health. 2015 Jul;7(7):132-6. Review.

17.

Mutation in galP improved fermentation of mixed sugars to succinate using engineered Escherichia coli AS1600a and AM1 mineral salts medium.

Sawisit A, Jantama K, Zheng H, Yomano LP, York SW, Shanmugam KT, Ingram LO.

Bioresour Technol. 2015 Oct;193:433-41. doi: 10.1016/j.biortech.2015.06.108. Epub 2015 Jun 25.

PMID:
26159300
18.

DNA adducts-chemical addons.

Rajalakshmi TR, AravindhaBabu N, Shanmugam KT, Masthan KM.

J Pharm Bioallied Sci. 2015 Apr;7(Suppl 1):S197-9. doi: 10.4103/0975-7406.155901. Review.

19.

Combining treatments to improve the fermentation of sugarcane bagasse hydrolysates by ethanologenic Escherichia coli LY180.

Geddes R, Shanmugam KT, Ingram LO.

Bioresour Technol. 2015;189:15-22. doi: 10.1016/j.biortech.2015.03.141. Epub 2015 Mar 31.

PMID:
25864026
20.

Immunology of oral candidiasis.

Dineshshankar J, Sivakumar M, Karthikeyan M, Udayakumar P, Shanmugam KT, Kesavan G.

J Pharm Bioallied Sci. 2014 Jul;6(Suppl 1):S9-S12. doi: 10.4103/0975-7406.137251. Review.

21.

Polyamine transporters and polyamines increase furfural tolerance during xylose fermentation with ethanologenic Escherichia coli strain LY180.

Geddes RD, Wang X, Yomano LP, Miller EN, Zheng H, Shanmugam KT, Ingram LO.

Appl Environ Microbiol. 2014 Oct;80(19):5955-64. doi: 10.1128/AEM.01913-14. Epub 2014 Jul 25.

22.

GIV/Girdin is a central hub for profibrogenic signalling networks during liver fibrosis.

Lopez-Sanchez I, Dunkel Y, Roh YS, Mittal Y, De Minicis S, Muranyi A, Singh S, Shanmugam K, Aroonsakool N, Murray F, Ho SB, Seki E, Brenner DA, Ghosh P.

Nat Commun. 2014 Jul 21;5:4451. doi: 10.1038/ncomms5451.

23.

A mutant BRAF V600E-specific immunohistochemical assay: correlation with molecular mutation status and clinical outcome in colorectal cancer.

Day F, Muranyi A, Singh S, Shanmugam K, Williams D, Byrne D, Pham K, Palmieri M, Tie J, Grogan T, Gibbs P, Sieber O, Waring P, Desai J.

Target Oncol. 2015 Mar;10(1):99-109. doi: 10.1007/s11523-014-0319-8. Epub 2014 May 27.

24.

Right bundle branch block: an uncommon cardiotoxic manifestation of hair dye poisoning-a case report.

Balasubramanian D, Subramanian S, Thangaraju P, Shanmugam K.

J Clin Diagn Res. 2014 Jan;8(1):174-6. doi: 10.7860/JCDR/2014/6966.3962. Epub 2014 Jan 12.

25.

Energy-optimised pharmacophore approach to identify potential hotspots during inhibition of Class II HDAC isoforms.

Ganai SA, Shanmugam K, Mahadevan V.

J Biomol Struct Dyn. 2015;33(2):374-87. doi: 10.1080/07391102.2013.879073. Epub 2014 Jan 27.

PMID:
24460542
26.

Anti-inflammatory effects of five commercially available mushroom species determined in lipopolysaccharide and interferon-γ activated murine macrophages.

Gunawardena D, Bennett L, Shanmugam K, King K, Williams R, Zabaras D, Head R, Ooi L, Gyengesi E, Münch G.

Food Chem. 2014 Apr 1;148:92-6. doi: 10.1016/j.foodchem.2013.10.015. Epub 2013 Oct 14.

PMID:
24262531
27.

Mutation-specific antibody detects mutant BRAFV600E protein expression in human colon carcinomas.

Sinicrope FA, Smyrk TC, Tougeron D, Thibodeau SN, Singh S, Muranyi A, Shanmugam K, Grogan TM, Alberts SR, Shi Q.

Cancer. 2013 Aug 1;119(15):2765-70. doi: 10.1002/cncr.28133. Epub 2013 May 8.

28.

Determination of anti-inflammatory activities of standardised preparations of plant- and mushroom-based foods.

Gunawardena D, Shanmugam K, Low M, Bennett L, Govindaraghavan S, Head R, Ooi L, Münch G.

Eur J Nutr. 2014 Feb;53(1):335-43. doi: 10.1007/s00394-013-0531-9. Epub 2013 May 8.

PMID:
23653285
29.

Another look at follicular lymphoma: immunophenotypic and molecular analyses identify distinct follicular lymphoma subgroups.

Marafioti T, Copie-Bergman C, Calaminici M, Paterson JC, Shende VH, Liu H, Baia M, Ramsay AD, Agostinelli C, Brière J, Clear A, Du MQ, Piccaluga PP, Masir N, Nacheva EP, Sujobert P, Shanmugam K, Grogan TM, Brooks SP, Khwaja A, Ardeshna K, Townsend W, Pileri SA, Haioun C, Linch D, Gribben JG, Gaulard P, Isaacson PG.

Histopathology. 2013 May;62(6):860-75. doi: 10.1111/his.12076. Epub 2013 Mar 20.

PMID:
23509938
30.

Improving Escherichia coli FucO for furfural tolerance by saturation mutagenesis of individual amino acid positions.

Zheng H, Wang X, Yomano LP, Geddes RD, Shanmugam KT, Ingram LO.

Appl Environ Microbiol. 2013 May;79(10):3202-8. doi: 10.1128/AEM.00149-13. Epub 2013 Mar 8.

31.

Engineering furfural tolerance in Escherichia coli improves the fermentation of lignocellulosic sugars into renewable chemicals.

Wang X, Yomano LP, Lee JY, York SW, Zheng H, Mullinnix MT, Shanmugam KT, Ingram LO.

Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4021-6. doi: 10.1073/pnas.1217958110. Epub 2013 Feb 19.

32.

Seed train development for the fermentation of bagasse from sweet sorghum and sugarcane using a simplified fermentation process.

Geddes CC, Mullinnix MT, Nieves IU, Hoffman RW, Sagues WJ, York SW, Shanmugam KT, Erickson JE, Vermerris WE, Ingram LO.

Bioresour Technol. 2013 Jan;128:716-24. doi: 10.1016/j.biortech.2012.09.121. Epub 2012 Oct 16.

PMID:
23375156
33.
34.

Conventional and nanotechniques for DNA methylation profiling.

Shanmuganathan R, Basheer NB, Amirthalingam L, Muthukumar H, Kaliaperumal R, Shanmugam K.

J Mol Diagn. 2013 Jan;15(1):17-26. doi: 10.1016/j.jmoldx.2012.06.007. Epub 2012 Nov 2. Review.

35.

Antioxidant and anti-inflammatory activities of selected Chinese medicinal plants and their relation with antioxidant content.

Ravipati AS, Zhang L, Koyyalamudi SR, Jeong SC, Reddy N, Bartlett J, Smith PT, Shanmugam K, Münch G, Wu MJ, Satyanarayanan M, Vysetti B.

BMC Complement Altern Med. 2012 Oct 6;12:173. doi: 10.1186/1472-6882-12-173.

36.

Oral manifestations in hypertensive patients: A clinical study.

Kumar P, Mastan K, Chowdhary R, Shanmugam K.

J Oral Maxillofac Pathol. 2012 May;16(2):215-21. doi: 10.4103/0973-029X.99069.

37.

Complete genome sequence of Paenibacillus sp. strain JDR-2.

Chow V, Nong G, St John FJ, Rice JD, Dickstein E, Chertkov O, Bruce D, Detter C, Brettin T, Han J, Woyke T, Pitluck S, Nolan M, Pati A, Martin J, Copeland A, Land ML, Goodwin L, Jones JB, Ingram LO, Shanmugam KT, Preston JF.

Stand Genomic Sci. 2012 Mar 19;6(1):1-10. doi: 10.4056/sigs.2374349. Epub 2012 Mar 5.

38.

Complete Genome Sequence of a thermotolerant sporogenic lactic acid bacterium, Bacillus coagulans strain 36D1.

Rhee MS, Moritz BE, Xie G, Glavina Del Rio T, Dalin E, Tice H, Bruce D, Goodwin L, Chertkov O, Brettin T, Han C, Detter C, Pitluck S, Land ML, Patel M, Ou M, Harbrucker R, Ingram LO, Shanmugam KT.

Stand Genomic Sci. 2011 Dec 31;5(3):331-40. doi: 10.4056/sigs.2365342. Epub 2011 Dec 22.

39.

In vitro evaluation of calcium oxalate monohydrate crystals influenced by Costus igneus aqueous extract.

Kesavan M, Kaliaperumal R, Tamilmani E, Shanmugam K.

Scand J Urol Nephrol. 2012 Aug;46(4):290-7. doi: 10.3109/00365599.2012.669792. Epub 2012 May 1.

PMID:
22545945
40.

Increase in furfural tolerance in ethanologenic Escherichia coli LY180 by plasmid-based expression of thyA.

Zheng H, Wang X, Yomano LP, Shanmugam KT, Ingram LO.

Appl Environ Microbiol. 2012 Jun;78(12):4346-52. doi: 10.1128/AEM.00356-12. Epub 2012 Apr 13.

41.

Amino acid substitutions at glutamate-354 in dihydrolipoamide dehydrogenase of Escherichia coli lower the sensitivity of pyruvate dehydrogenase to NADH.

Sun Z, Do PM, Rhee MS, Govindasamy L, Wang Q, Ingram LO, Shanmugam KT.

Microbiology. 2012 May;158(Pt 5):1350-8. doi: 10.1099/mic.0.055590-0. Epub 2012 Feb 16.

PMID:
22343352
42.

Increased furan tolerance in Escherichia coli due to a cryptic ucpA gene.

Wang X, Miller EN, Yomano LP, Shanmugam KT, Ingram LO.

Appl Environ Microbiol. 2012 Apr;78(7):2452-5. doi: 10.1128/AEM.07783-11. Epub 2012 Jan 20.

43.

Structure-based virtual screening for plant-derived SdiA-selective ligands as potential antivirulent agents against uropathogenic Escherichia coli.

Ravichandiran V, Shanmugam K, Anupama K, Thomas S, Princy A.

Eur J Med Chem. 2012 Feb;48:200-5. doi: 10.1016/j.ejmech.2011.12.015. Epub 2011 Dec 16.

PMID:
22209416
44.

Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes.

Turner PC, Yomano LP, Jarboe LR, York SW, Baggett CL, Moritz BE, Zentz EB, Shanmugam KT, Ingram LO.

J Ind Microbiol Biotechnol. 2012 Apr;39(4):629-39. doi: 10.1007/s10295-011-1052-2. Epub 2011 Nov 11.

PMID:
22075923
45.

Evolution of D-lactate dehydrogenase activity from glycerol dehydrogenase and its utility for D-lactate production from lignocellulose.

Wang Q, Ingram LO, Shanmugam KT.

Proc Natl Acad Sci U S A. 2011 Nov 22;108(47):18920-5. doi: 10.1073/pnas.1111085108. Epub 2011 Nov 7.

46.

Antioxidant and anti-inflammatory activities of selected medicinal plants containing phenolic and flavonoid compounds.

Zhang L, Ravipati AS, Koyyalamudi SR, Jeong SC, Reddy N, Smith PT, Bartlett J, Shanmugam K, Münch G, Wu MJ.

J Agric Food Chem. 2011 Dec 14;59(23):12361-7. doi: 10.1021/jf203146e. Epub 2011 Nov 10.

PMID:
22023309
47.

Positive patterning of ferritin and fibronectin molecules on silicon by the atomic force microscopic anodic oxidation technique.

Shanmugam K, Yoshinobu T, Moon W, Iwasaki H.

J Nanosci Nanotechnol. 2011 May;11(5):3808-13.

PMID:
21780372
48.

Effect of alcohol on blood glucose and antioxidant enzymes in the liver and kidney of diabetic rats.

Shanmugam KR, Mallikarjuna K, Reddy KS.

Indian J Pharmacol. 2011 May;43(3):330-5. doi: 10.4103/0253-7613.81504.

49.

Isolation, characterization and evolution of a new thermophilic Bacillus licheniformis for lactic acid production in mineral salts medium.

Wang Q, Zhao X, Chamu J, Shanmugam KT.

Bioresour Technol. 2011 Sep;102(17):8152-8. doi: 10.1016/j.biortech.2011.06.003. Epub 2011 Jun 6.

PMID:
21704521
50.

Increased furfural tolerance due to overexpression of NADH-dependent oxidoreductase FucO in Escherichia coli strains engineered for the production of ethanol and lactate.

Wang X, Miller EN, Yomano LP, Zhang X, Shanmugam KT, Ingram LO.

Appl Environ Microbiol. 2011 Aug;77(15):5132-40. doi: 10.1128/AEM.05008-11. Epub 2011 Jun 17.

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