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Items: 1 to 50 of 141

1.

Does feedback improve psychotherapy outcomes compared to treatment-as-usual for adults and youth?

Dyason KM, Shanley DC, O'Donovan A, Low-Choy S.

Psychother Res. 2019 May 24:1-15. doi: 10.1080/10503307.2019.1620367. [Epub ahead of print]

PMID:
31122152
2.

Outcomes of In Situ Training for Disclosure as a Standalone and a Booster to a Child Protective Behaviors Education Program.

White C, Shanley DC, Zimmer-Gembeck MJ, Walsh K, Hawkins R, Lines K.

Child Maltreat. 2019 May;24(2):193-202. doi: 10.1177/1077559518816877. Epub 2018 Dec 9.

PMID:
30526001
3.

Modelling the role of redox-related mechanisms in musculoskeletal ageing.

Guimera AM, Shanley DP, Proctor CJ.

Free Radic Biol Med. 2019 Feb 20;132:11-18. doi: 10.1016/j.freeradbiomed.2018.09.013. Epub 2018 Sep 13. Review.

PMID:
30219703
4.

Promoting young children's interpersonal safety knowledge, intentions, confidence, and protective behavior skills: Outcomes of a randomized controlled trial.

White C, Shanley DC, Zimmer-Gembeck MJ, Walsh K, Hawkins R, Lines K, Webb H.

Child Abuse Negl. 2018 Aug;82:144-155. doi: 10.1016/j.chiabu.2018.05.024. Epub 2018 Jun 11.

PMID:
29902697
5.

"Tell, tell, tell again": The prevalence and correlates of young children's response to and disclosure of an in-vivo lure from a stranger.

White C, Shanley DC, Zimmer-Gembeck MJ, Walsh K, Hawkins R, Lines K.

Child Abuse Negl. 2018 Aug;82:134-143. doi: 10.1016/j.chiabu.2018.06.001. Epub 2018 Jun 11.

PMID:
29902696
6.

PyCoTools: a Python toolbox for COPASI.

Welsh CM, Fullard N, Proctor CJ, Martinez-Guimera A, Isfort RJ, Bascom CC, Tasseff R, Przyborski SA, Shanley DP.

Bioinformatics. 2018 Nov 1;34(21):3702-3710. doi: 10.1093/bioinformatics/bty409.

7.

Predominant Asymmetrical Stem Cell Fate Outcome Limits the Rate of Niche Succession in Human Colonic Crypts.

Stamp C, Zupanic A, Sachdeva A, Stoll EA, Shanley DP, Mathers JC, Kirkwood TBL, Heer R, Simons BD, Turnbull DM, Greaves LC.

EBioMedicine. 2018 May;31:166-173. doi: 10.1016/j.ebiom.2018.04.017. Epub 2018 Apr 25.

8.

Parental Discussion of Child Sexual Abuse: Is It Associated with the Parenting Practices of Involvement, Monitoring, and General Communication?

Rudolph J, Zimmer-Gembeck MJ, Shanley DC, Walsh K, Hawkins R.

J Child Sex Abus. 2018 Feb-Mar;27(2):195-216. doi: 10.1080/10538712.2018.1425946. Epub 2018 Mar 1.

PMID:
29494794
9.

'Molecular habituation' as a potential mechanism of gradual homeostatic loss with age.

Martinez Guimera A, Welsh CM, Proctor CJ, McArdle A, Shanley DP.

Mech Ageing Dev. 2018 Jan;169:53-62. doi: 10.1016/j.mad.2017.11.010. Epub 2017 Nov 14.

10.

Cross platform analysis of transcriptomic data identifies ageing has distinct and opposite effects on tendon in males and females.

Pease LI, Clegg PD, Proctor CJ, Shanley DJ, Cockell SJ, Peffers MJ.

Sci Rep. 2017 Oct 31;7(1):14443. doi: 10.1038/s41598-017-14650-z.

11.

Child Sexual Abuse Prevention Opportunities: Parenting, Programs, and the Reduction of Risk.

Rudolph J, Zimmer-Gembeck MJ, Shanley DC, Hawkins R.

Child Maltreat. 2018 Feb;23(1):96-106. doi: 10.1177/1077559517729479. Epub 2017 Sep 18.

PMID:
28920456
12.

Pervasive gene expression responses to a fluctuating diet in Drosophila melanogaster: The importance of measuring multiple traits to decouple potential mediators of life span and reproduction.

Zandveld J, van den Heuvel J, Mulder M, Brakefield PM, Kirkwood TBL, Shanley DP, Zwaan BJ.

Evolution. 2017 Nov;71(11):2572-2583. doi: 10.1111/evo.13327. Epub 2017 Sep 25.

PMID:
28833068
13.

Explaining sex differences in lifespan in terms of optimal energy allocation in the baboon.

King AM, Kirkwood TBL, Shanley DP.

Evolution. 2017 Oct;71(10):2280-2297. doi: 10.1111/evo.13316. Epub 2017 Sep 14.

PMID:
28744878
14.

Systems modelling ageing: from single senescent cells to simple multi-cellular models.

Martinez Guimera A, Welsh C, Dalle Pezze P, Fullard N, Nelson G, Roger MF, Przyborski SA, Shanley DP.

Essays Biochem. 2017 Jul 11;61(3):369-377. doi: 10.1042/EBC20160087. Print 2017 Jul 15. Review.

15.

Growing more positive with age: The relationship between reproduction and survival in aging flies.

van den Heuvel J, Zandveld J, Brakefield PM, Kirkwood TBL, Shanley DP, Zwaan BJ.

Exp Gerontol. 2017 Apr;90:34-42. doi: 10.1016/j.exger.2017.01.016. Epub 2017 Jan 22.

PMID:
28122252
16.

A systems study reveals concurrent activation of AMPK and mTOR by amino acids.

Dalle Pezze P, Ruf S, Sonntag AG, Langelaar-Makkinje M, Hall P, Heberle AM, Razquin Navas P, van Eunen K, Tölle RC, Schwarz JJ, Wiese H, Warscheid B, Deitersen J, Stork B, Fäßler E, Schäuble S, Hahn U, Horvatovich P, Shanley DP, Thedieck K.

Nat Commun. 2016 Nov 21;7:13254. doi: 10.1038/ncomms13254.

17.

Reverse Signaling by Semaphorin-6A Regulates Cellular Aggregation and Neuronal Morphology.

Perez-Branguli F, Zagar Y, Shanley DK, Graef IA, Chédotal A, Mitchell KJ.

PLoS One. 2016 Jul 8;11(7):e0158686. doi: 10.1371/journal.pone.0158686. eCollection 2016.

18.

Modeling and gene knockdown to assess the contribution of nonsense-mediated decay, premature termination, and selenocysteine insertion to the selenoprotein hierarchy.

Zupanic A, Meplan C, Huguenin GV, Hesketh JE, Shanley DP.

RNA. 2016 Jul;22(7):1076-84. doi: 10.1261/rna.055749.115. Epub 2016 May 20.

19.

Increasing extracellular H2O2 produces a bi-phasic response in intracellular H2O2, with peroxiredoxin hyperoxidation only triggered once the cellular H2O2-buffering capacity is overwhelmed.

Tomalin LE, Day AM, Underwood ZE, Smith GR, Dalle Pezze P, Rallis C, Patel W, Dickinson BC, Bähler J, Brewer TF, Chang CJ, Shanley DP, Veal EA.

Free Radic Biol Med. 2016 Jun;95:333-48. doi: 10.1016/j.freeradbiomed.2016.02.035. Epub 2016 Mar 2.

20.

Pregnancy-specific glycoprotein expression in normal gastrointestinal tract and in tumors detected with novel monoclonal antibodies.

Houston A, Williams JM, Rovis TL, Shanley DK, O'Riordan RT, Kiely PA, Ball M, Barry OP, Kelly J, Fanning A, MacSharry J, Mandelboim O, Singer BB, Jonjic S, Moore T.

MAbs. 2016;8(3):491-500. doi: 10.1080/19420862.2015.1134410. Epub 2016 Feb 29. Erratum in: MAbs. 2018 Aug/Sep;10(6):944.

21.

Cluster randomised-control trial for an Australian child protection education program: Study protocol for the Learn to be safe with Emmy and friends™.

White C, Shanley DC, Zimmer-Gembeck MJ, Lines K, Walsh K, Hawkins R.

BMC Public Health. 2016 Jan 25;16:72. doi: 10.1186/s12889-016-2721-x.

22.

Empowering and protecting children by enhancing knowledge, skills and well-being: A randomized trial of Learn to BE SAFE with Emmy.

Dale R, Shanley DC, Zimmer-Gembeck MJ, Lines K, Pickering K, White C.

Child Abuse Negl. 2016 Jan;51:368-78. doi: 10.1016/j.chiabu.2015.07.016. Epub 2015 Sep 7.

PMID:
26360708
23.

Genome-Wide MicroRNA and Gene Analysis of Mesenchymal Stem Cell Chondrogenesis Identifies an Essential Role and Multiple Targets for miR-140-5p.

Barter MJ, Tselepi M, Gómez R, Woods S, Hui W, Smith GR, Shanley DP, Clark IM, Young DA.

Stem Cells. 2015 Nov;33(11):3266-80. doi: 10.1002/stem.2093. Epub 2015 Jul 29.

24.

Integrated Stochastic Model of DNA Damage Repair by Non-homologous End Joining and p53/p21-Mediated Early Senescence Signalling.

Dolan DW, Zupanic A, Nelson G, Hall P, Miwa S, Kirkwood TB, Shanley DP.

PLoS Comput Biol. 2015 May 28;11(5):e1004246. doi: 10.1371/journal.pcbi.1004246. eCollection 2015 May.

25.

A dynamic framework for the study of optimal birth intervals reveals the importance of sibling competition and mortality risks.

Thomas MG, Shanley DP, Houston AI, McNamara JM, Mace R, Kirkwood TB.

J Evol Biol. 2015 Apr;28(4):885-95. doi: 10.1111/jeb.12613. Epub 2015 Mar 17.

26.

The plastic fly: the effect of sustained fluctuations in adult food supply on life-history traits.

van den Heuvel J, Zandveld J, Mulder M, Brakefield PM, Kirkwood TB, Shanley DP, Zwaan BJ.

J Evol Biol. 2014 Nov;27(11):2322-33. doi: 10.1111/jeb.12444.

27.

Towards an understanding of semaphorin signalling in the spinal cord.

O'Malley AM, Shanley DK, Kelly AT, Barry DS.

Gene. 2014 Dec 15;553(2):69-74. doi: 10.1016/j.gene.2014.10.005. Epub 2014 Oct 7. Review.

PMID:
25300255
28.

Dynamic modelling of pathways to cellular senescence reveals strategies for targeted interventions.

Dalle Pezze P, Nelson G, Otten EG, Korolchuk VI, Kirkwood TB, von Zglinicki T, Shanley DP.

PLoS Comput Biol. 2014 Aug 28;10(8):e1003728. doi: 10.1371/journal.pcbi.1003728. eCollection 2014 Aug.

29.

Detecting translational regulation by change point analysis of ribosome profiling data sets.

Zupanic A, Meplan C, Grellscheid SN, Mathers JC, Kirkwood TB, Hesketh JE, Shanley DP.

RNA. 2014 Oct;20(10):1507-18. doi: 10.1261/rna.045286.114. Epub 2014 Aug 21.

30.

Computational modelling of the regulation of Insulin signalling by oxidative stress.

Smith GR, Shanley DP.

BMC Syst Biol. 2013 May 24;7:41. doi: 10.1186/1752-0509-7-41.

31.

Pregnancy-specific glycoproteins bind integrin αIIbβ3 and inhibit the platelet-fibrinogen interaction.

Shanley DK, Kiely PA, Golla K, Allen S, Martin K, O'Riordan RT, Ball M, Aplin JD, Singer BB, Caplice N, Moran N, Moore T.

PLoS One. 2013;8(2):e57491. doi: 10.1371/journal.pone.0057491. Epub 2013 Feb 28.

32.

Systems modelling of NHEJ reveals the importance of redox regulation of Ku70/80 in the dynamics of dna damage foci.

Dolan D, Nelson G, Zupanic A, Smith G, Shanley D.

PLoS One. 2013;8(2):e55190. doi: 10.1371/journal.pone.0055190. Epub 2013 Feb 6.

33.

The predictive adaptive response: modeling the life-history evolution of the butterfly Bicyclus anynana in seasonal environments.

van den Heuvel J, Saastamoinen M, Brakefield PM, Kirkwood TB, Zwaan BJ, Shanley DP.

Am Nat. 2013 Feb;181(2):E28-42. doi: 10.1086/668818. Epub 2013 Jan 14.

PMID:
23348784
34.

Glutathione peroxidase 4 has a major role in protecting mitochondria from oxidative damage and maintaining oxidative phosphorylation complexes in gut epithelial cells.

Cole-Ezea P, Swan D, Shanley D, Hesketh J.

Free Radic Biol Med. 2012 Aug 1;53(3):488-97. doi: 10.1016/j.freeradbiomed.2012.05.029. Epub 2012 May 25.

PMID:
22634395
35.

A dynamic network model of mTOR signaling reveals TSC-independent mTORC2 regulation.

Dalle Pezze P, Sonntag AG, Thien A, Prentzell MT, Gödel M, Fischer S, Neumann-Haefelin E, Huber TB, Baumeister R, Shanley DP, Thedieck K.

Sci Signal. 2012 Mar 27;5(217):ra25. doi: 10.1126/scisignal.2002469.

36.

A modelling-experimental approach reveals insulin receptor substrate (IRS)-dependent regulation of adenosine monosphosphate-dependent kinase (AMPK) by insulin.

Sonntag AG, Dalle Pezze P, Shanley DP, Thedieck K.

FEBS J. 2012 Sep;279(18):3314-28. doi: 10.1111/j.1742-4658.2012.08582.x. Epub 2012 May 3.

37.

A stochastic step model of replicative senescence explains ROS production rate in ageing cell populations.

Lawless C, Jurk D, Gillespie CS, Shanley D, Saretzki G, von Zglinicki T, Passos JF.

PLoS One. 2012;7(2):e32117. doi: 10.1371/journal.pone.0032117. Epub 2012 Feb 16.

38.

Evolution of asymmetric damage segregation : a modelling approach.

Rashidi A, Kirkwood TB, Shanley DP.

Subcell Biochem. 2012;57:315-30. doi: 10.1007/978-94-007-2561-4_14. Review.

PMID:
22094428
39.

Help-seeking for children with mental health problems: parents' efforts and experiences.

Reid GJ, Cunningham CE, Tobon JI, Evans B, Stewart M, Brown JB, Lent B, Neufeld RW, Vingilis ER, Zaric GS, Shanley DC.

Adm Policy Ment Health. 2011 Sep;38(5):384-97. doi: 10.1007/s10488-010-0325-9.

PMID:
21057868
40.

The connections between general and reproductive senescence and the evolutionary basis of menopause.

Kirkwood TB, Shanley DP.

Ann N Y Acad Sci. 2010 Aug;1204:21-9. doi: 10.1111/j.1749-6632.2010.05520.x. Review.

PMID:
20738272
41.
42.

Does HIPE data capture the complexity of stroke patients in an acute hospital setting?

Clarke B, Kennelly S, Shanley D, Hogan-Lowe D, McCormack PM.

Ir Med J. 2010 Jan;103(1):23-4.

PMID:
20222391
43.

An evolutionary perspective on the mechanisms of immunosenescence.

Shanley DP, Aw D, Manley NR, Palmer DB.

Trends Immunol. 2009 Jul;30(7):374-81. doi: 10.1016/j.it.2009.05.001. Epub 2009 Jun 21. Review.

PMID:
19541538
44.

Metabolic evolution suggests an explanation for the weakness of antioxidant defences in beta-cells.

Rashidi A, Kirkwood TB, Shanley DP.

Mech Ageing Dev. 2009 Apr;130(4):216-21. Review.

PMID:
19396979
45.

Ultrastructural and functional characterization of satellitosis in the human lateral amygdala associated with Ammon's horn sclerosis.

Faber-Zuschratter H, Hüttmann K, Steinhäuser C, Becker A, Schramm J, Okafo U, Shanley D, Yilmazer-Hanke DM.

Acta Neuropathol. 2009 May;117(5):545-55. doi: 10.1007/s00401-009-0504-5. Epub 2009 Feb 27.

PMID:
19247679
46.

Evolution of the menopause: life histories and mechanisms.

Rashidi A, Shanley D.

Menopause Int. 2009 Mar;15(1):26-30. doi: 10.1258/mi.2009.009005. Review.

PMID:
19237619
47.

Nine years of DentEd--a global perspective on dental education.

Reynolds PA, Eaton KA, Paganelli C, Shanley D.

Br Dent J. 2008 Aug 23;205(4):199-204. doi: 10.1038/sj.bdj.2008.698.

PMID:
18724340
48.

Candida dubliniensis: An update.

Sullivan DJ, Moran G, Donnelly S, Gee S, Pinjon E, McCartan B, Shanley DB, Coleman DC.

Rev Iberoam Micol. 1999 Jun;16(2):72-6. No abstract available.

49.

Summary of the Global Congress and the challenges posed.

Shanley D, Manogue M, Valachovic R.

Eur J Dent Educ. 2008 Feb;12 Suppl 1:176-83. doi: 10.1111/j.1600-0579.2007.00499.x. No abstract available.

PMID:
18289280
50.

The global network on dental education: a new vision for IFDEA.

De Vries J, Murtomaa H, Butler M, Cherrett H, Ferrillo P, Ferro MB, Gadbury-Amyot C, Haden NK, Manogue M, Mintz J, Mulvihill JE, Murray B, Nattestad A, Nielsen D, Ogunbodede E, Parkash H, Plasschaert F, Reed MT, Rupp RL, Tandon S, Wang B, Wang S, Yucel T, Valachovic RW, Watkinson A, Shanley D.

Eur J Dent Educ. 2008 Feb;12 Suppl 1:167-75. doi: 10.1111/j.1600-0579.2007.00498.x.

PMID:
18289279

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