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Items: 8

1.

In plaque-mass spectrometry imaging of a bloom-forming alga during viral infection reveals a metabolic shift towards odd-chain fatty acid lipids.

Schleyer G, Shahaf N, Ziv C, Dong Y, Meoded RA, Helfrich EJN, Schatz D, Rosenwasser S, Rogachev I, Aharoni A, Piel J, Vardi A.

Nat Microbiol. 2019 Mar;4(3):527-538. doi: 10.1038/s41564-018-0336-y. Epub 2019 Feb 4.

PMID:
30718847
2.

A Complete Pipeline for Generating a High-Resolution LC-MS-Based Reference Mass Spectra Library.

Shahaf N, Aharoni A, Rogachev I.

Methods Mol Biol. 2018;1778:193-206. doi: 10.1007/978-1-4939-7819-9_14.

PMID:
29761440
3.

Current Challenges in Plant Eco-Metabolomics.

Peters K, Worrich A, Weinhold A, Alka O, Balcke G, Birkemeyer C, Bruelheide H, Calf OW, Dietz S, Dührkop K, Gaquerel E, Heinig U, Kücklich M, Macel M, Müller C, Poeschl Y, Pohnert G, Ristok C, Rodríguez VM, Ruttkies C, Schuman M, Schweiger R, Shahaf N, Steinbeck C, Tortosa M, Treutler H, Ueberschaar N, Velasco P, Weiß BM, Widdig A, Neumann S, Dam NMV.

Int J Mol Sci. 2018 May 6;19(5). pii: E1385. doi: 10.3390/ijms19051385. Review.

4.

The WEIZMASS spectral library for high-confidence metabolite identification.

Shahaf N, Rogachev I, Heinig U, Meir S, Malitsky S, Battat M, Wyner H, Zheng S, Wehrens R, Aharoni A.

Nat Commun. 2016 Aug 30;7:12423. doi: 10.1038/ncomms12423.

5.

How to Choose the Suitable Template for Homology Modelling of GPCRs: 5-HT7 Receptor as a Test Case.

Shahaf N, Pappalardo M, Basile L, Guccione S, Rayan A.

Mol Inform. 2016 Sep;35(8-9):414-23. doi: 10.1002/minf.201501029. Epub 2016 Jun 28.

PMID:
27546045
6.

MetaDB a Data Processing Workflow in Untargeted MS-Based Metabolomics Experiments.

Franceschi P, Mylonas R, Shahaf N, Scholz M, Arapitsas P, Masuero D, Weingart G, Carlin S, Vrhovsek U, Mattivi F, Wehrens R.

Front Bioeng Biotechnol. 2014 Dec 16;2:72. doi: 10.3389/fbioe.2014.00072. eCollection 2014.

7.

Constructing a mass measurement error surface to improve automatic annotations in liquid chromatography/mass spectrometry based metabolomics.

Shahaf N, Franceschi P, Arapitsas P, Rogachev I, Vrhovsek U, Wehrens R.

Rapid Commun Mass Spectrom. 2013 Nov 15;27(21):2425-31. doi: 10.1002/rcm.6705.

PMID:
24097399
8.

Evaluation of peak picking quality in LC-MS metabolomics data.

Brodsky L, Moussaieff A, Shahaf N, Aharoni A, Rogachev I.

Anal Chem. 2010 Nov 15;82(22):9177-87. doi: 10.1021/ac101216e. Epub 2010 Oct 26.

PMID:
20977194

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