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Items: 1 to 50 of 54

1.

MreB polymers and curvature localization are enhanced by RodZ and predict E. coli's cylindrical uniformity.

Bratton BP, Shaevitz JW, Gitai Z, Morgenstein RM.

Nat Commun. 2018 Jul 18;9(1):2797. doi: 10.1038/s41467-018-05186-5.

2.

A gated relaxation oscillator mediated by FrzX controls morphogenetic movements in Myxococcus xanthus.

Guzzo M, Murray SM, Martineau E, Lhospice S, Baronian G, My L, Zhang Y, Espinosa L, Vincentelli R, Bratton BP, Shaevitz JW, Molle V, Howard M, Mignot T.

Nat Microbiol. 2018 Aug;3(8):948-959. doi: 10.1038/s41564-018-0203-x. Epub 2018 Jul 16.

PMID:
30013238
3.

Temporal processing and context dependency in Caenorhabditis elegans response to mechanosensation.

Liu M, Sharma AK, Shaevitz JW, Leifer AM.

Elife. 2018 Jun 26;7. pii: e36419. doi: 10.7554/eLife.36419.

4.

Optogenetic dissection of descending behavioral control in Drosophila.

Cande J, Namiki S, Qiu J, Korff W, Card GM, Shaevitz JW, Stern DL, Berman GJ.

Elife. 2018 Jun 26;7. pii: e34275. doi: 10.7554/eLife.34275.

5.

The effect of antibiotics on protein diffusion in the Escherichia coli cytoplasmic membrane.

Liu GS, Bratton BP, Gitai Z, Shaevitz JW.

PLoS One. 2017 Oct 4;12(10):e0185810. doi: 10.1371/journal.pone.0185810. eCollection 2017.

6.

Force generation by groups of migrating bacteria.

Sabass B, Koch MD, Liu G, Stone HA, Shaevitz JW.

Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):7266-7271. doi: 10.1073/pnas.1621469114. Epub 2017 Jun 27.

7.

Automatically tracking neurons in a moving and deforming brain.

Nguyen JP, Linder AN, Plummer GS, Shaevitz JW, Leifer AM.

PLoS Comput Biol. 2017 May 18;13(5):e1005517. doi: 10.1371/journal.pcbi.1005517. eCollection 2017 May.

8.

An unsupervised method for quantifying the behavior of paired animals.

Klibaite U, Berman GJ, Cande J, Stern DL, Shaevitz JW.

Phys Biol. 2017 Feb 16;14(1):015006. doi: 10.1088/1478-3975/aa5c50.

9.

A Periplasmic Polymer Curves Vibrio cholerae and Promotes Pathogenesis.

Bartlett TM, Bratton BP, Duvshani A, Miguel A, Sheng Y, Martin NR, Nguyen JP, Persat A, Desmarais SM, VanNieuwenhze MS, Huang KC, Zhu J, Shaevitz JW, Gitai Z.

Cell. 2017 Jan 12;168(1-2):172-185.e15. doi: 10.1016/j.cell.2016.12.019. Epub 2017 Jan 12.

10.

Introduction to Optical Tweezers.

Koch MD, Shaevitz JW.

Methods Mol Biol. 2017;1486:3-24. doi: 10.1007/978-1-4939-6421-5_1. Review.

PMID:
27844423
11.

Predictability and hierarchy in Drosophila behavior.

Berman GJ, Bialek W, Shaevitz JW.

Proc Natl Acad Sci U S A. 2016 Oct 18;113(42):11943-11948. Epub 2016 Oct 4.

12.

MreB Orientation Correlates with Cell Diameter in Escherichia coli.

Ouzounov N, Nguyen JP, Bratton BP, Jacobowitz D, Gitai Z, Shaevitz JW.

Biophys J. 2016 Sep 6;111(5):1035-43. doi: 10.1016/j.bpj.2016.07.017.

13.

Biophysical Measurements of Bacterial Cell Shape.

Nguyen JP, Bratton BP, Shaevitz JW.

Methods Mol Biol. 2016;1440:227-45. doi: 10.1007/978-1-4939-3676-2_17.

PMID:
27311676
14.

The PSI-U1 snRNP interaction regulates male mating behavior in Drosophila.

Wang Q, Taliaferro JM, Klibaite U, Hilgers V, Shaevitz JW, Rio DC.

Proc Natl Acad Sci U S A. 2016 May 10;113(19):5269-74. doi: 10.1073/pnas.1600936113. Epub 2016 Apr 25.

15.

Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans.

Nguyen JP, Shipley FB, Linder AN, Plummer GS, Liu M, Setru SU, Shaevitz JW, Leifer AM.

Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):E1074-81. doi: 10.1073/pnas.1507110112. Epub 2015 Dec 28.

16.

RodZ links MreB to cell wall synthesis to mediate MreB rotation and robust morphogenesis.

Morgenstein RM, Bratton BP, Nguyen JP, Ouzounov N, Shaevitz JW, Gitai Z.

Proc Natl Acad Sci U S A. 2015 Oct 6;112(40):12510-5. doi: 10.1073/pnas.1509610112. Epub 2015 Sep 22.

17.

Simple Experimental Methods for Determining the Apparent Focal Shift in a Microscope System.

Bratton BP, Shaevitz JW.

PLoS One. 2015 Aug 13;10(8):e0134616. doi: 10.1371/journal.pone.0134616. eCollection 2015.

18.

Directional reversals enable Myxococcus xanthus cells to produce collective one-dimensional streams during fruiting-body formation.

Thutupalli S, Sun M, Bunyak F, Palaniappan K, Shaevitz JW.

J R Soc Interface. 2015 Aug 6;12(109):20150049. doi: 10.1098/rsif.2015.0049.

19.

Origins of Escherichia coli growth rate and cell shape changes at high external osmolality.

Pilizota T, Shaevitz JW.

Biophys J. 2014 Oct 21;107(8):1962-1969. doi: 10.1016/j.bpj.2014.08.025.

20.

Mapping the stereotyped behaviour of freely moving fruit flies.

Berman GJ, Choi DM, Bialek W, Shaevitz JW.

J R Soc Interface. 2014 Oct 6;11(99). pii: 20140672. doi: 10.1098/rsif.2014.0672.

21.

Passive mechanical forces control cell-shape change during Drosophila ventral furrow formation.

Polyakov O, He B, Swan M, Shaevitz JW, Kaschube M, Wieschaus E.

Biophys J. 2014 Aug 19;107(4):998-1010. doi: 10.1016/j.bpj.2014.07.013.

22.

Myxococcus xanthus gliding motors are elastically coupled to the substrate as predicted by the focal adhesion model of gliding motility.

Balagam R, Litwin DB, Czerwinski F, Sun M, Kaplan HB, Shaevitz JW, Igoshin OA.

PLoS Comput Biol. 2014 May 8;10(5):e1003619. doi: 10.1371/journal.pcbi.1003619. eCollection 2014 May.

23.

Spatial covariance reconstructive (SCORE) super-resolution fluorescence microscopy.

Deng Y, Sun M, Lin PH, Ma J, Shaevitz JW.

PLoS One. 2014 Apr 30;9(4):e94807. doi: 10.1371/journal.pone.0094807. eCollection 2014.

24.

Rod-like bacterial shape is maintained by feedback between cell curvature and cytoskeletal localization.

Ursell TS, Nguyen J, Monds RD, Colavin A, Billings G, Ouzounov N, Gitai Z, Shaevitz JW, Huang KC.

Proc Natl Acad Sci U S A. 2014 Mar 18;111(11):E1025-34. doi: 10.1073/pnas.1317174111. Epub 2014 Feb 18.

25.

Efficient multiple object tracking using mutually repulsive active membranes.

Deng Y, Coen P, Sun M, Shaevitz JW.

PLoS One. 2013 Jun 14;8(6):e65769. doi: 10.1371/journal.pone.0065769. Print 2013.

26.

Plasmolysis and cell shape depend on solute outer-membrane permeability during hyperosmotic shock in E. coli.

Pilizota T, Shaevitz JW.

Biophys J. 2013 Jun 18;104(12):2733-42. doi: 10.1016/j.bpj.2013.05.011.

27.

Combining modeling and experiment to understand bacterial growth.

Shaevitz JW.

Biophys J. 2013 Jun 18;104(12):2573. doi: 10.1016/j.bpj.2013.05.007. No abstract available.

28.

Non-local interaction via diffusible resource prevents coexistence of cooperators and cheaters in a lattice model.

Borenstein DB, Meir Y, Shaevitz JW, Wingreen NS.

PLoS One. 2013 May 17;8(5):e63304. doi: 10.1371/journal.pone.0063304. Print 2013.

29.

The mechanics of shape in prokaryotes.

Wang S, Shaevitz JW.

Front Biosci (Schol Ed). 2013 Jan 1;5:564-74. Review.

PMID:
23277069
30.

The molecular origins of chiral growth in walled cells.

Huang KC, Ehrhardt DW, Shaevitz JW.

Curr Opin Microbiol. 2012 Dec;15(6):707-14. doi: 10.1016/j.mib.2012.11.002. Epub 2012 Nov 26. Review.

31.

Fast, multiphase volume adaptation to hyperosmotic shock by Escherichia coli.

Pilizota T, Shaevitz JW.

PLoS One. 2012;7(4):e35205. doi: 10.1371/journal.pone.0035205. Epub 2012 Apr 13.

32.

Image analysis in fluorescence microscopy: bacterial dynamics as a case study.

van Teeffelen S, Shaevitz JW, Gitai Z.

Bioessays. 2012 May;34(5):427-36. doi: 10.1002/bies.201100148. Epub 2012 Mar 13. Review.

33.

Helical insertion of peptidoglycan produces chiral ordering of the bacterial cell wall.

Wang S, Furchtgott L, Huang KC, Shaevitz JW.

Proc Natl Acad Sci U S A. 2012 Mar 6;109(10):E595-604. doi: 10.1073/pnas.1117132109. Epub 2012 Feb 17.

34.

Direct measurement of cell wall stress stiffening and turgor pressure in live bacterial cells.

Deng Y, Sun M, Shaevitz JW.

Phys Rev Lett. 2011 Oct 7;107(15):158101. Epub 2011 Oct 6.

PMID:
22107320
35.

The bacterial actin MreB rotates, and rotation depends on cell-wall assembly.

van Teeffelen S, Wang S, Furchtgott L, Huang KC, Wingreen NS, Shaevitz JW, Gitai Z.

Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15822-7. doi: 10.1073/pnas.1108999108. Epub 2011 Sep 8.

36.

Motor-driven intracellular transport powers bacterial gliding motility.

Sun M, Wartel M, Cascales E, Shaevitz JW, Mignot T.

Proc Natl Acad Sci U S A. 2011 May 3;108(18):7559-64. doi: 10.1073/pnas.1101101108. Epub 2011 Apr 11.

37.

The structure and function of bacterial actin homologs.

Shaevitz JW, Gitai Z.

Cold Spring Harb Perspect Biol. 2010 Sep;2(9):a000364. doi: 10.1101/cshperspect.a000364. Epub 2010 Jul 14. Review.

38.

Actin-like cytoskeleton filaments contribute to cell mechanics in bacteria.

Wang S, Arellano-Santoyo H, Combs PA, Shaevitz JW.

Proc Natl Acad Sci U S A. 2010 May 18;107(20):9182-5. doi: 10.1073/pnas.0911517107. Epub 2010 May 3.

39.

Measuring the bending stiffness of bacterial cells using an optical trap.

Wang S, Arellano-Santoyo H, Combs PA, Shaevitz JW.

J Vis Exp. 2010 Apr 26;(38). pii: 2012. doi: 10.3791/2012.

40.
41.

Active and passive mechanisms of intracellular transport and localization in bacteria.

Mignot T, Shaevitz JW.

Curr Opin Microbiol. 2008 Dec;11(6):580-5. doi: 10.1016/j.mib.2008.10.005. Epub 2008 Nov 18. Review.

PMID:
19007909
42.

Slow stress propagation in adherent cells.

Rosenbluth MJ, Crow A, Shaevitz JW, Fletcher DA.

Biophys J. 2008 Dec 15;95(12):6052-9. doi: 10.1529/biophysj.108.139139. Epub 2008 Sep 19.

43.

Curvature and torsion in growing actin networks.

Shaevitz JW, Fletcher DA.

Phys Biol. 2008 Jun 16;5(2):026006. doi: 10.1088/1478-3975/5/2/026006.

44.

Super-resolution for a 3D world.

Shaevitz JW.

Nat Methods. 2008 Jun;5(6):471-2. doi: 10.1038/nmeth0608-471. No abstract available.

PMID:
18511914
45.

Load fluctuations drive actin network growth.

Shaevitz JW, Fletcher DA.

Proc Natl Acad Sci U S A. 2007 Oct 2;104(40):15688-92. Epub 2007 Sep 25.

46.

Enhanced three-dimensional deconvolution microscopy using a measured depth-varying point-spread function.

Shaevitz JW, Fletcher DA.

J Opt Soc Am A Opt Image Sci Vis. 2007 Sep;24(9):2622-7.

PMID:
17767232
47.

Evidence that focal adhesion complexes power bacterial gliding motility.

Mignot T, Shaevitz JW, Hartzell PL, Zusman DR.

Science. 2007 Feb 9;315(5813):853-6.

48.

Direct observation of base-pair stepping by RNA polymerase.

Abbondanzieri EA, Greenleaf WJ, Shaevitz JW, Landick R, Block SM.

Nature. 2005 Nov 24;438(7067):460-5. Epub 2005 Nov 13.

49.

Picocalorimetry of transcription by RNA polymerase.

Abbondanzieri EA, Shaevitz JW, Block SM.

Biophys J. 2005 Dec;89(6):L61-3. Epub 2005 Oct 20.

50.

Spiroplasma swim by a processive change in body helicity.

Shaevitz JW, Lee JY, Fletcher DA.

Cell. 2005 Sep 23;122(6):941-5.

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