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Items: 29

1.

Xi-cam: a versatile interface for data visualization and analysis.

Pandolfi RJ, Allan DB, Arenholz E, Barroso-Luque L, Campbell SI, Caswell TA, Blair A, De Carlo F, Fackler S, Fournier AP, Freychet G, Fukuto M, G├╝rsoy D, Jiang Z, Krishnan H, Kumar D, Kline RJ, Li R, Liman C, Marchesini S, Mehta A, N'Diaye AT, Parkinson DY, Parks H, Pellouchoud LA, Perciano T, Ren F, Sahoo S, Strzalka J, Sunday D, Tassone CJ, Ushizima D, Venkatakrishnan S, Yager KG, Zwart P, Sethian JA, Hexemer A.

J Synchrotron Radiat. 2018 Jul 1;25(Pt 4):1261-1270. doi: 10.1107/S1600577518005787. Epub 2018 May 31.

PMID:
29979189
2.

Electrohydrodynamic coalescence of droplets using an embedded potential flow model.

Garzon M, Gray LJ, Sethian JA.

Phys Rev E. 2018 Mar;97(3-1):033112. doi: 10.1103/PhysRevE.97.033112.

PMID:
29776168
3.

A mixed-scale dense convolutional neural network for image analysis.

Pelt DM, Sethian JA.

Proc Natl Acad Sci U S A. 2018 Jan 9;115(2):254-259. doi: 10.1073/pnas.1715832114. Epub 2017 Dec 26.

4.

Reconstruction from limited single-particle diffraction data via simultaneous determination of state, orientation, intensity, and phase.

Donatelli JJ, Sethian JA, Zwart PH.

Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):7222-7227. doi: 10.1073/pnas.1708217114. Epub 2017 Jun 26.

5.

Nanosurveyor: a framework for real-time data processing.

Daurer BJ, Krishnan H, Perciano T, Maia FRNC, Shapiro DA, Sethian JA, Marchesini S.

Adv Struct Chem Imaging. 2017;3(1):7. doi: 10.1186/s40679-017-0039-0. Epub 2017 Jan 31.

6.

Iterative phasing for fluctuation X-ray scattering.

Donatelli JJ, Zwart PH, Sethian JA.

Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10286-91. doi: 10.1073/pnas.1513738112. Epub 2015 Aug 3.

7.

Multicellular architecture of malignant breast epithelia influences mechanics.

Venugopalan G, Camarillo DB, Webster KD, Reber CD, Sethian JA, Weaver VM, Fletcher DA, El-Samad H, Rycroft CH.

PLoS One. 2014 Aug 11;9(8):e101955. doi: 10.1371/journal.pone.0101955. eCollection 2014.

8.

Numerical simulations of electrostatically driven jets from nonviscous droplets.

Garzon M, Gray LJ, Sethian JA.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Mar;89(3):033011. Epub 2014 Mar 13.

PMID:
24730941
9.

Rapid disorganization of mechanically interacting systems of mammary acini.

Shi Q, Ghosh RP, Engelke H, Rycroft CH, Cassereau L, Sethian JA, Weaver VM, Liphardt JT.

Proc Natl Acad Sci U S A. 2014 Jan 14;111(2):658-63. doi: 10.1073/pnas.1311312110. Epub 2013 Dec 30.

10.

Algorithmic framework for X-ray nanocrystallographic reconstruction in the presence of the indexing ambiguity.

Donatelli JJ, Sethian JA.

Proc Natl Acad Sci U S A. 2014 Jan 14;111(2):593-8. doi: 10.1073/pnas.1321790111. Epub 2013 Dec 16.

11.

Multiscale modeling of membrane rearrangement, drainage, and rupture in evolving foams.

Saye RI, Sethian JA.

Science. 2013 May 10;340(6133):720-4. doi: 10.1126/science.1230623.

12.

Augmented Topological Descriptors of Pore Networks for Material Science.

Ushizima D, Morozov D, Weber GH, Bianchi AG, Sethian JA, Bethel EW.

IEEE Trans Vis Comput Graph. 2012 Dec;18(12):2041-50. doi: 10.1109/TVCG.2012.200.

PMID:
26357110
13.

The Voronoi Implicit Interface Method for computing multiphase physics.

Saye RI, Sethian JA.

Proc Natl Acad Sci U S A. 2011 Dec 6;108(49):19498-503. doi: 10.1073/pnas.1111557108. Epub 2011 Nov 21.

14.

Simulation of the droplet-to-bubble transition in a two-fluid system.

Garzon M, Gray LJ, Sethian JA.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Apr;83(4 Pt 2):046318. Epub 2011 Apr 27.

PMID:
21599306
15.

Automatic Structure Analysis in High-Throughput Characterization of Porous Materials.

Haranczyk M, Sethian JA.

J Chem Theory Comput. 2010 Nov 9;6(11):3472-80. doi: 10.1021/ct100433z. Epub 2010 Oct 14.

PMID:
26617098
16.

Navigating molecular worms inside chemical labyrinths.

Haranczyk M, Sethian JA.

Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21472-7. doi: 10.1073/pnas.0910016106. Epub 2009 Dec 14.

17.

Exact subgrid interface correction schemes for elliptic interface problems.

Huh JS, Sethian JA.

Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9874-9. doi: 10.1073/pnas.0707997105. Epub 2008 Jul 17.

18.

Fast marching methods for the continuous traveling salesman problem.

Andrews J, Sethian JA.

Proc Natl Acad Sci U S A. 2007 Jan 23;104(4):1118-23. Epub 2007 Jan 12.

19.

Simulating complex tumor dynamics from avascular to vascular growth using a general level-set method.

Hogea CS, Murray BT, Sethian JA.

J Math Biol. 2006 Jul;53(1):86-134. Epub 2006 Apr 28.

PMID:
16791651
20.

Fast-phase space computation of multiple arrivals.

Fomel S, Sethian JA.

Proc Natl Acad Sci U S A. 2002 May 28;99(11):7329-34.

21.

Ordered upwind methods for static Hamilton-Jacobi equations.

Sethian JA, Vladimirsky A.

Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11069-74.

22.

Subjective surfaces: a method for completing missing boundaries.

Sarti A, Malladi R, Sethian JA.

Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6258-63.

23.

Fast methods for the Eikonal and related Hamilton- Jacobi equations on unstructured meshes.

Sethian JA, Vladimirsky A.

Proc Natl Acad Sci U S A. 2000 May 23;97(11):5699-703.

24.

Computing geodesic paths on manifolds.

Kimmel R, Sethian JA.

Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):8431-5.

25.

An O(N log N) algorithm for shape modeling.

Malladi R, Sethian JA.

Proc Natl Acad Sci U S A. 1996 Sep 3;93(18):9389-92.

26.

A fast marching level set method for monotonically advancing fronts.

Sethian JA.

Proc Natl Acad Sci U S A. 1996 Feb 20;93(4):1591-5.

27.

A unified approach to noise removal, image enhancement, and shape recovery.

Malladi R, Sethian JA.

IEEE Trans Image Process. 1996;5(11):1554-68.

PMID:
18290072
28.

Image processing via level set curvature flow.

Malladi R, Sethian JA.

Proc Natl Acad Sci U S A. 1995 Jul 18;92(15):7046-50.

29.

Search, encounter rates, and the evolution of anisogamy.

Cox PA, Sethian JA.

Proc Natl Acad Sci U S A. 1984 Oct;81(19):6078-9.

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