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Items: 28

1.

Genome sequence of a diabetes-prone rodent reveals a mutation hotspot around the ParaHox gene cluster.

Hargreaves AD, Zhou L, Christensen J, Marlétaz F, Liu S, Li F, Jansen PG, Spiga E, Hansen MT, Pedersen SVH, Biswas S, Serikawa K, Fox BA, Taylor WR, Mulley JF, Zhang G, Heller RS, Holland PWH.

Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7677-7682. doi: 10.1073/pnas.1702930114. Epub 2017 Jul 3.

2.

Genomic architecture of inflammatory bowel disease in five families with multiple affected individuals.

Stittrich AB, Ashworth J, Shi M, Robinson M, Mauldin D, Brunkow ME, Biswas S, Kim JM, Kwon KS, Jung JU, Galas D, Serikawa K, Duerr RH, Guthery SL, Peschon J, Hood L, Roach JC, Glusman G.

Hum Genome Var. 2016 Jan 7;3:15060. doi: 10.1038/hgv.2015.60. eCollection 2016.

3.

Depletion of regulatory T cells leads to an exacerbation of delayed-type hypersensitivity arthritis in C57BL/6 mice that can be counteracted by IL-17 blockade.

Atkinson SM, Hoffmann U, Hamann A, Bach E, Danneskiold-Samsøe NB, Kristiansen K, Serikawa K, Fox B, Kruse K, Haase C, Skov S, Nansen A.

Dis Model Mech. 2016 Apr;9(4):427-40. doi: 10.1242/dmm.022905. Epub 2016 Jan 28.

4.

Anti-RANKL treatment inhibits erosive joint destruction and lowers inflammation but has no effect on bone formation in the delayed-type hypersensitivity arthritis (DTHA) model.

Atkinson SM, Bleil J, Maier R, Kühl AA, Thorn M, Serikawa K, Fox B, Kruse K, Haase C, Skov S, Nansen A, Syrbe U.

Arthritis Res Ther. 2016 Jan 23;18:28. doi: 10.1186/s13075-016-0931-3.

5.

High-resolution gene expression profiling using RNA sequencing in patients with inflammatory bowel disease and in mouse models of colitis.

Holgersen K, Kutlu B, Fox B, Serikawa K, Lord J, Hansen AK, Holm TL.

J Crohns Colitis. 2015 Jun;9(6):492-506. doi: 10.1093/ecco-jcc/jjv050. Epub 2015 Mar 20.

PMID:
25795566
6.

Lack of genetic association between TREM2 and late-onset Alzheimer's disease in a Japanese population.

Miyashita A, Wen Y, Kitamura N, Matsubara E, Kawarabayashi T, Shoji M, Tomita N, Furukawa K, Arai H, Asada T, Harigaya Y, Ikeda M, Amari M, Hanyu H, Higuchi S, Nishizawa M, Suga M, Kawase Y, Akatsu H, Imagawa M, Hamaguchi T, Yamada M, Morihara T, Takeda M, Takao T, Nakata K, Sasaki K, Watanabe K, Nakashima K, Urakami K, Ooya T, Takahashi M, Yuzuriha T, Serikawa K, Yoshimoto S, Nakagawa R, Saito Y, Hatsuta H, Murayama S, Kakita A, Takahashi H, Yamaguchi H, Akazawa K, Kanazawa I, Ihara Y, Ikeuchi T, Kuwano R.

J Alzheimers Dis. 2014;41(4):1031-8. doi: 10.3233/JAD-140225.

PMID:
24762945
7.

SORL1 is genetically associated with late-onset Alzheimer's disease in Japanese, Koreans and Caucasians.

Miyashita A, Koike A, Jun G, Wang LS, Takahashi S, Matsubara E, Kawarabayashi T, Shoji M, Tomita N, Arai H, Asada T, Harigaya Y, Ikeda M, Amari M, Hanyu H, Higuchi S, Ikeuchi T, Nishizawa M, Suga M, Kawase Y, Akatsu H, Kosaka K, Yamamoto T, Imagawa M, Hamaguchi T, Yamada M, Morihara T, Takeda M, Takao T, Nakata K, Fujisawa Y, Sasaki K, Watanabe K, Nakashima K, Urakami K, Ooya T, Takahashi M, Yuzuriha T, Serikawa K, Yoshimoto S, Nakagawa R, Kim JW, Ki CS, Won HH, Na DL, Seo SW, Mook-Jung I; Alzheimer Disease Genetics Consortium, St George-Hyslop P, Mayeux R, Haines JL, Pericak-Vance MA, Yoshida M, Nishida N, Tokunaga K, Yamamoto K, Tsuji S, Kanazawa I, Ihara Y, Schellenberg GD, Farrer LA, Kuwano R.

PLoS One. 2013;8(4):e58618. doi: 10.1371/journal.pone.0058618. Epub 2013 Apr 2. Erratum in: PLoS One. 2013;8(7). doi:10.1371/annotation/fcb56ea7-d32a-4e45-818d-39cef330c731. Moriaha, Takashi [corrected to Morihara, Takashi].

8.

Detection of gene expression signatures related to underlying disease and treatment in rheumatoid arthritis patients.

Serikawa KA, Jacobsen S, Lundsgaard D, Fox BA, Hummelshoj L, Poulsen LK, Fleckner J, Frederiksen KS.

Mod Rheumatol. 2013 Jul;23(4):729-40. doi: 10.1007/s10165-012-0723-9. Epub 2012 Aug 8. Erratum in: Mod Rheumatol. 2013 Jul;23(4):741.

PMID:
22872428
9.

Transcriptional architecture of the primate neocortex.

Bernard A, Lubbers LS, Tanis KQ, Luo R, Podtelezhnikov AA, Finney EM, McWhorter MM, Serikawa K, Lemon T, Morgan R, Copeland C, Smith K, Cullen V, Davis-Turak J, Lee CK, Sunkin SM, Loboda AP, Levine DM, Stone DJ, Hawrylycz MJ, Roberts CJ, Jones AR, Geschwind DH, Lein ES.

Neuron. 2012 Mar 22;73(6):1083-99. doi: 10.1016/j.neuron.2012.03.002. Epub 2012 Mar 21.

10.

Multiplexed measurements of gene signatures in different analytes using the Nanostring nCounter Assay System.

Malkov VA, Serikawa KA, Balantac N, Watters J, Geiss G, Mashadi-Hossein A, Fare T.

BMC Res Notes. 2009 May 9;2:80. doi: 10.1186/1756-0500-2-80.

11.

Refined anatomical isolation of functional sleep circuits exhibits distinctive regional and circadian gene transcriptional profiles.

Winrow CJ, Tanis KQ, Rigby AM, Taylor RR, Serikawa K, McWhorter M, Tokiwa GY, Marton MJ, Stone DJ, Koblan KS, Renger JJ.

Brain Res. 2009 May 19;1271:1-17. doi: 10.1016/j.brainres.2009.02.083. Epub 2009 Mar 17.

PMID:
19302983
12.

What is the best reference RNA? And other questions regarding the design and analysis of two-color microarray experiments.

Kerr KF, Serikawa KA, Wei C, Peters MA, Bumgarner RE.

OMICS. 2007 Summer;11(2):152-65.

PMID:
17594235
13.

Quantitative proteomic analysis of the budding yeast cell cycle using acid-cleavable isotope-coded affinity tag reagents.

Flory MR, Lee H, Bonneau R, Mallick P, Serikawa K, Morris DR, Aebersold R.

Proteomics. 2006 Dec;6(23):6146-57.

PMID:
17133367
14.

The dominant negative thyroid hormone receptor beta-mutant {Delta}337T alters PPAR{alpha} signaling in heart.

Buroker NE, Young ME, Wei C, Serikawa K, Ge M, Ning XH, Portman MA.

Am J Physiol Endocrinol Metab. 2007 Feb;292(2):E453-60. Epub 2006 Sep 19.

15.

A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies.

Kuo WP, Liu F, Trimarchi J, Punzo C, Lombardi M, Sarang J, Whipple ME, Maysuria M, Serikawa K, Lee SY, McCrann D, Kang J, Shearstone JR, Burke J, Park DJ, Wang X, Rector TL, Ricciardi-Castagnoli P, Perrin S, Choi S, Bumgarner R, Kim JH, Short GF 3rd, Freeman MW, Seed B, Jensen R, Church GM, Hovig E, Cepko CL, Park P, Ohno-Machado L, Jenssen TK.

Nat Biotechnol. 2006 Jul;24(7):832-40. Epub 2006 Jul 2.

PMID:
16823376
16.

Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone.

MacKay VL, Li X, Flory MR, Turcott E, Law GL, Serikawa KA, Xu XL, Lee H, Goodlett DR, Aebersold R, Zhao LP, Morris DR.

Mol Cell Proteomics. 2004 May;3(5):478-89. Epub 2004 Feb 6.

17.

The F-box-containing protein UFO and AGAMOUS participate in antagonistic pathways governing early petal development in Arabidopsis.

Durfee T, Roe JL, Sessions RA, Inouye C, Serikawa K, Feldmann KA, Weigel D, Zambryski PC.

Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8571-6. Epub 2003 Jun 25.

18.

The transcriptome and its translation during recovery from cell cycle arrest in Saccharomyces cerevisiae.

Serikawa KA, Xu XL, MacKay VL, Law GL, Zong Q, Zhao LP, Bumgarner R, Morris DR.

Mol Cell Proteomics. 2003 Mar;2(3):191-204. Epub 2003 Apr 7.

19.
20.

Calcification and measurements of net proton and oxygen flux reveal subcellular domains in Acetabularia acetabulum.

Serikawa KA, Porterfield DM, Smith PJ, Mandoli DF.

Planta. 2000 Sep;211(4):474-83.

PMID:
11030546
21.

Aaknox1, a kn1-like homeobox gene in Acetabularia acetabulum, undergoes developmentally regulated subcellular localization.

Serikawa KA, Mandoli DF.

Plant Mol Biol. 1999 Dec;41(6):785-93. Erratum in: Plant Mol Biol 2000 Feb;42(3):545.

PMID:
10737143
23.

Localization of expression of KNAT3, a class 2 knotted1-like gene.

Serikawa KA, Martinez-Laborda A, Kim HS, Zambryski PC.

Plant J. 1997 Apr;11(4):853-61.

24.

Three knotted1-like homeobox genes in Arabidopsis.

Serikawa KA, Martinez-Laborda A, Zambryski P.

Plant Mol Biol. 1996 Nov;32(4):673-83.

PMID:
8980519
26.
27.

[Radiation-induced malignant skin tumors in the hands of five doctors].

Hashizume S, Otani K, Serikawa K, Ikari Y, Chiba T, Sasa M, Endow M, Ishida H.

Gan No Rinsho. 1990 Feb;36(2):224-8. Japanese.

PMID:
2308215
28.

[A case of eccrine spiradenoma electron microscopic and immunohistochemical features].

Serikawa K, Tokuhashi I, Murakami M, Ikari Y, Kanda S, Nagayoshi S.

Nihon Hifuka Gakkai Zasshi. 1988 Aug;98(9):879-889. Japanese. No abstract available.

PMID:
2468800

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