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Items: 13

1.

Sequential ChIP Protocol for Profiling Bivalent Epigenetic Modifications (ReChIP).

Desvoyes B, Sequeira-Mendes J, Vergara Z, Madeira S, Gutierrez C.

Methods Mol Biol. 2018;1675:83-97. doi: 10.1007/978-1-4939-7318-7_6.

PMID:
29052187
2.

A Rapid and Efficient ChIP Protocol to Profile Chromatin Binding Proteins and Epigenetic Modifications in Arabidopsis.

Desvoyes B, Vergara Z, Sequeira-Mendes J, Madeira S, Gutierrez C.

Methods Mol Biol. 2018;1675:71-82. doi: 10.1007/978-1-4939-7318-7_5.

PMID:
29052186
3.

Retrotransposons are specified as DNA replication origins in the gene-poor regions of Arabidopsis heterochromatin.

Vergara Z, Sequeira-Mendes J, Morata J, Peiró R, Hénaff E, Costas C, Casacuberta JM, Gutierrez C.

Nucleic Acids Res. 2017 Aug 21;45(14):8358-8368. doi: 10.1093/nar/gkx524.

4.

Links of genome replication, transcriptional silencing and chromatin dynamics.

Gutierrez C, Desvoyes B, Vergara Z, Otero S, Sequeira-Mendes J.

Curr Opin Plant Biol. 2016 Dec;34:92-99. doi: 10.1016/j.pbi.2016.10.005. Epub 2016 Oct 27. Review.

PMID:
27816819
5.

Genome architecture: from linear organisation of chromatin to the 3D assembly in the nucleus.

Sequeira-Mendes J, Gutierrez C.

Chromosoma. 2016 Jun;125(3):455-69. doi: 10.1007/s00412-015-0538-5. Epub 2015 Sep 2. Review.

6.

Links between genome replication and chromatin landscapes.

Sequeira-Mendes J, Gutierrez C.

Plant J. 2015 Jul;83(1):38-51. doi: 10.1111/tpj.12847. Epub 2015 Apr 29. Review.

7.

Looking at plant cell cycle from the chromatin window.

Desvoyes B, Fernández-Marcos M, Sequeira-Mendes J, Otero S, Vergara Z, Gutierrez C.

Front Plant Sci. 2014 Jul 25;5:369. doi: 10.3389/fpls.2014.00369. eCollection 2014. Review.

8.

The Functional Topography of the Arabidopsis Genome Is Organized in a Reduced Number of Linear Motifs of Chromatin States.

Sequeira-Mendes J, Aragüez I, Peiró R, Mendez-Giraldez R, Zhang X, Jacobsen SE, Bastolla U, Gutierrez C.

Plant Cell. 2014 Jun;26(6):2351-2366. Epub 2014 Jun 16.

9.

The CDK regulators Cdh1 and Sic1 promote efficient usage of DNA replication origins to prevent chromosomal instability at a chromosome arm.

Ayuda-Durán P, Devesa F, Gomes F, Sequeira-Mendes J, Avila-Zarza C, Gómez M, Calzada A.

Nucleic Acids Res. 2014 Jun;42(11):7057-68. doi: 10.1093/nar/gku313. Epub 2014 Apr 21.

10.

Regulating DNA replication in plants.

Sanchez Mde L, Costas C, Sequeira-Mendes J, Gutierrez C.

Cold Spring Harb Perspect Biol. 2012 Dec 1;4(12). pii: a010140. doi: 10.1101/cshperspect.a010140. Review.

11.

On the opportunistic nature of transcription and replication initiation in the metazoan genome.

Sequeira-Mendes J, Gómez M.

Bioessays. 2012 Feb;34(2):119-25. doi: 10.1002/bies.201100126. Epub 2011 Nov 16. Review.

12.

Progress in understanding DNA replication control.

Costas C, Sanchez Mde L, Sequeira-Mendes J, Gutierrez C.

Plant Sci. 2011 Sep;181(3):203-9. doi: 10.1016/j.plantsci.2011.04.020. Epub 2011 May 27. Review.

PMID:
21763530
13.

Transcription initiation activity sets replication origin efficiency in mammalian cells.

Sequeira-Mendes J, Díaz-Uriarte R, Apedaile A, Huntley D, Brockdorff N, Gómez M.

PLoS Genet. 2009 Apr;5(4):e1000446. doi: 10.1371/journal.pgen.1000446. Epub 2009 Apr 10.

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