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Items: 1 to 50 of 526

1.

Resolving the conformational dynamics of ErbB growth factor receptor dimers.

Pawar AB, Sengupta D.

J Struct Biol. 2019 Jun 1. pii: S1047-8477(19)30129-7. doi: 10.1016/j.jsb.2019.05.013. [Epub ahead of print]

PMID:
31163211
2.

Paederia foetida induces anticancer activity by modulating chromatin modification enzymes and altering pro-inflammatory cytokine gene expression in human prostate cancer cells.

Pradhan N, Parbin S, Kausar C, Kar S, Mawatwal S, Das L, Deb M, Sengupta D, Dhiman R, Patra SK.

Food Chem Toxicol. 2019 Aug;130:161-173. doi: 10.1016/j.fct.2019.05.016. Epub 2019 May 18.

PMID:
31112703
3.

Estimating menarcheal age distribution from partially recalled data.

Mirzaei Salehabadi S, Sengupta D, Ghosal R.

Biostatistics. 2019 May 13. pii: kxz013. doi: 10.1093/biostatistics/kxz013. [Epub ahead of print]

PMID:
31086969
4.

Association of p38MAPK-p53-Fas aggregation in S-allyl cysteine mediated regulation of hepatocarcinoma.

Chatterjee S, Patra D, Chakraborti U, Sengupta D, Ghosh P, Basu A, Sadhukhan GC, Chowdhury KD.

Environ Toxicol. 2019 May 8. doi: 10.1002/tox.22764. [Epub ahead of print]

PMID:
31067004
5.

Dual activity of amphiphilic Zn(II) nitroporphyrin derivatives as HIV-1 entry inhibitors and in cancer photodynamic therapy.

Sengupta D, Timilsina U, Mazumder ZH, Mukherjee A, Ghimire D, Markandey M, Upadhyaya K, Sharma D, Mishra N, Jha T, Basu S, Gaur R.

Eur J Med Chem. 2019 Jul 15;174:66-75. doi: 10.1016/j.ejmech.2019.04.051. Epub 2019 Apr 20.

PMID:
31029945
6.

miR-193a targets MLL1 mRNA and drastically decreases MLL1 protein production: Ectopic expression of the miRNA aberrantly lowers H3K4me3 content of the chromatin and hampers cell proliferation and viability.

Sengupta D, Deb M, Kar S, Parbin S, Pradhan N, Patra SK.

Gene. 2019 Jul 15;705:22-35. doi: 10.1016/j.gene.2019.04.046. Epub 2019 Apr 18.

PMID:
31005612
7.

Epigenetic silencing of genes enhanced by collective role of reactive oxygen species and MAPK signaling downstream ERK/Snail axis: Ectopic application of hydrogen peroxide repress CDH1 gene by enhanced DNA methyltransferase activity in human breast cancer.

Pradhan N, Parbin S, Kar S, Das L, Kirtana R, Suma Seshadri G, Sengupta D, Deb M, Kausar C, Patra SK.

Biochim Biophys Acta Mol Basis Dis. 2019 Jun 1;1865(6):1651-1665. doi: 10.1016/j.bbadis.2019.04.002. Epub 2019 Apr 4.

PMID:
30954555
8.

Renal safety of tenofovir alafenamide vs tenofovir disoproxil fumarate: A pooled analysis of 26 clinical trials.

Gupta SK, Post FA, Arribas JR, Eron JJ Jr, Wohl DA, Clarke AE, Sax PE, Stellbrink HJ, Esser S, Pozniak AL, Podzamczer D, Waters L, Orkin C, Rockstroh JK, Mudrikova T, Negredo E, Elion RA, Guo S, Zhong L, Carter C, Martin H, Brainard D, Sengupta D, Das M.

AIDS. 2019 May 2. doi: 10.1097/QAD.0000000000002223. [Epub ahead of print]

PMID:
30932951
9.

Multiplexed Single-Cell Measurements of FDG Uptake and Lactate Release Using Droplet Microfluidics.

Sengupta D, Mongersun A, Kim TJ, Mongersun K, von Eyben R, Abbyad P, Pratx G.

Technol Cancer Res Treat. 2019 Jan 1;18:1533033819841066. doi: 10.1177/1533033819841066.

10.

Cathepsin B mediated scramblase activation triggers cytotoxicity and cell cycle arrest by andrographolide to overcome cellular resistance in cisplatin resistant human hepatocellular carcinoma HepG2 cells.

Chowdhury KD, Sarkar A, Chatterjee S, Patra D, Sengupta D, Banerjee S, Chakraborty P, Sadhukhan GC.

Environ Toxicol Pharmacol. 2019 May;68:120-132. doi: 10.1016/j.etap.2019.03.003. Epub 2019 Mar 5.

PMID:
30889542
11.

Resistance Analysis of Bictegravir-Emtricitabine-Tenofovir Alafenamide in HIV-1 Treatment-Naive Patients through 48 Weeks.

Acosta RK, Willkom M, Martin R, Chang S, Wei X, Garner W, Lutz J, Majeed S, SenGupta D, Martin H, Quirk E, White KL.

Antimicrob Agents Chemother. 2019 Apr 25;63(5). pii: e02533-18. doi: 10.1128/AAC.02533-18. Print 2019 May.

PMID:
30803969
12.

McImpute: Matrix Completion Based Imputation for Single Cell RNA-seq Data.

Mongia A, Sengupta D, Majumdar A.

Front Genet. 2019 Jan 29;10:9. doi: 10.3389/fgene.2019.00009. eCollection 2019.

13.

Meta-analysis and prioritization of human skin pigmentation-associated GWAS-SNPs using ENCODE data-based web-tools.

Ganguly K, Saha T, Saha A, Dutta T, Banerjee S, Sengupta D, Bhattacharya S, Ghosh S, Sengupta M.

Arch Dermatol Res. 2019 Apr;311(3):163-171. doi: 10.1007/s00403-019-01891-3. Epub 2019 Feb 13.

PMID:
30756169
14.

Radioluminescence Microscopy: A Quantitative Method for Radioisotopic Imaging of Metabolic Fluxes in Living Cancer Cells.

Sengupta D, Pratx G.

Methods Mol Biol. 2019;1928:45-53. doi: 10.1007/978-1-4939-9027-6_3.

PMID:
30725449
15.

Radiation Dose for Pediatric CT: Comparison of Pediatric versus Adult Imaging Facilities.

Strauss KJ, Somasundaram E, Sengupta D, Marin JR, Brady SL.

Radiology. 2019 Apr;291(1):158-167. doi: 10.1148/radiol.2019181753. Epub 2019 Feb 5.

PMID:
30720404
16.

Curcumin and Solid Lipid Curcumin Particles Induce Autophagy, but Inhibit Mitophagy and the PI3K-Akt/mTOR Pathway in Cultured Glioblastoma Cells.

Maiti P, Scott J, Sengupta D, Al-Gharaibeh A, Dunbar GL.

Int J Mol Sci. 2019 Jan 18;20(2). pii: E399. doi: 10.3390/ijms20020399.

17.

Baclofen for neurogenic fever in a patient with cerebral contusion.

Sengupta D, Kapoor I, Mahajan C, Prabhakar H.

J Clin Anesth. 2019 Aug;55:134-135. doi: 10.1016/j.jclinane.2019.01.014. Epub 2019 Jan 15. No abstract available.

PMID:
30658326
18.

Molecular Signatures of Cholesterol Interaction with Serotonin Receptors.

Mohole M, Prasanna X, Sengupta D, Chattopadhyay A.

Adv Exp Med Biol. 2018;1112:151-160. doi: 10.1007/978-981-13-3065-0_11.

PMID:
30637696
19.

Interplay between Membrane Curvature and Cholesterol: Role of Palmitoylated Caveolin-1.

Krishna A, Sengupta D.

Biophys J. 2019 Jan 8;116(1):69-78. doi: 10.1016/j.bpj.2018.11.3127. Epub 2018 Dec 1.

PMID:
30579563
20.

Safety of elvitegravir, cobicistat, emtricitabine, and tenofovir alafenamide in HIV-1-infected adults with end-stage renal disease on chronic haemodialysis: an open-label, single-arm, multicentre, phase 3b trial.

Eron JJ Jr, Lelievre JD, Kalayjian R, Slim J, Wurapa AK, Stephens JL, McDonald C, Cua E, Wilkin A, Schmied B, McKellar M, Cox S, Majeed SR, Jiang S, Cheng A, Das M, SenGupta D.

Lancet HIV. 2018 Dec 13. pii: S2352-3018(18)30296-0. doi: 10.1016/S2352-3018(18)30296-0. [Epub ahead of print]

PMID:
30555051
21.

DNA methylation regulates Microtubule-associated tumor suppressor 1 in human non-small cell lung carcinoma.

Parbin S, Pradhan N, Das L, Saha P, Deb M, Sengupta D, Patra SK.

Exp Cell Res. 2019 Jan 15;374(2):323-332. doi: 10.1016/j.yexcr.2018.12.004. Epub 2018 Dec 7.

PMID:
30528566
22.

Technology review and data analysis for cost assessment of water treatment systems.

Bhojwani S, Topolski K, Mukherjee R, Sengupta D, El-Halwagi MM.

Sci Total Environ. 2019 Feb 15;651(Pt 2):2749-2761. doi: 10.1016/j.scitotenv.2018.09.363. Epub 2018 Oct 10.

PMID:
30463129
23.

Lipid composition and salt concentration as regulatory factors of the anion selectivity of VDAC studied by coarse-grained molecular dynamics simulations.

Van Liefferinge F, Krammer EM, Sengupta D, Prévost M.

Chem Phys Lipids. 2019 May;220:66-76. doi: 10.1016/j.chemphyslip.2018.11.002. Epub 2018 Nov 15.

PMID:
30448398
24.

Author Correction: Reference component analysis of single-cell transcriptomes elucidates cellular heterogeneity in human colorectal tumors.

Li H, Courtois ET, Sengupta D, Tan Y, Chen KH, Goh JJL, Kong SL, Chua C, Hon LK, Tan WS, Wong M, Cima I, Tan MH, Wee LJK, Hillmer AM, Tan IB, Robson P, Prabhakar S.

Nat Genet. 2018 Dec;50(12):1754. doi: 10.1038/s41588-018-0299-1.

PMID:
30420650
25.

Discovery of rare cells from voluminous single cell expression data.

Jindal A, Gupta P, Jayadeva, Sengupta D.

Nat Commun. 2018 Nov 9;9(1):4719. doi: 10.1038/s41467-018-07234-6.

26.

AutoImpute: Autoencoder based imputation of single-cell RNA-seq data.

Talwar D, Mongia A, Sengupta D, Majumdar A.

Sci Rep. 2018 Nov 5;8(1):16329. doi: 10.1038/s41598-018-34688-x.

27.

Pod-wall proteomics provide novel insights into soybean seed-filling process under chemical-induced terminal drought stress.

Sengupta D, Kariyat D, Marriboina S, Reddy AR.

J Sci Food Agric. 2019 Mar 30;99(5):2481-2493. doi: 10.1002/jsfa.9457. Epub 2018 Dec 27.

PMID:
30370933
28.

Understanding Conformational Dynamics of Complex Lipid Mixtures Relevant to Biology.

Friedman R, Khalid S, Aponte-Santamaría C, Arutyunova E, Becker M, Boyd KJ, Christensen M, Coimbra JTS, Concilio S, Daday C, van Eerden FJ, Fernandes PA, Gräter F, Hakobyan D, Heuer A, Karathanou K, Keller F, Lemieux MJ, Marrink SJ, May ER, Mazumdar A, Naftalin R, Pickholz M, Piotto S, Pohl P, Quinn P, Ramos MJ, Schiøtt B, Sengupta D, Sessa L, Vanni S, Zeppelin T, Zoni V, Bondar AN, Domene C.

J Membr Biol. 2018 Dec;251(5-6):609-631. doi: 10.1007/s00232-018-0050-y. Epub 2018 Oct 22. Review.

29.

Validation of Adult Relative Radiation Levels Using the ACR Dose Index Registry: Report of the ACR Appropriateness Criteria Radiation Exposure Subcommittee.

Subcommittee on Appropriateness Criteria Radiation Exposure, Jordan DW, Becker MD, Brady S, Keenan MA, Rosen MP, Sengupta D, Strauss KJ, Cody DD.

J Am Coll Radiol. 2019 Feb;16(2):236-239. doi: 10.1016/j.jacr.2018.08.008. Epub 2018 Sep 21.

PMID:
30245216
30.

Mitigation of drought-induced oxidative damage by enhanced carbon assimilation and an efficient antioxidative metabolism under high CO2 environment in pigeonpea (Cajanus cajan L.).

Sreeharsha RV, Mudalkar S, Sengupta D, Unnikrishnan DK, Reddy AR.

Photosynth Res. 2019 Mar;139(1-3):425-439. doi: 10.1007/s11120-018-0586-9. Epub 2018 Sep 22.

PMID:
30244353
31.

Effects of Ancillary Ligands on Redox and Chemical Properties of Ruthenium Coordinated Azoaromatic Pincer.

Rath SP, Sengupta D, Ghosh P, Bhattacharjee R, Chakraborty M, Samanta S, Datta A, Goswami S.

Inorg Chem. 2018 Oct 1;57(19):11995-12009. doi: 10.1021/acs.inorgchem.8b01558. Epub 2018 Sep 12.

PMID:
30207466
32.

Disproportionate feedback interactions govern cell-type specific proliferation in mammalian cells.

Sengupta D, Kompella VPS, Kar S.

FEBS Lett. 2018 Oct;592(19):3248-3263. doi: 10.1002/1873-3468.13241. Epub 2018 Sep 21.

PMID:
30192983
33.

Meta-Analysis of Polymorphic Variants Conferring Genetic Risk to Cervical Cancer in Indian Women Supports CYP1A1 as an Important Associated Locus

Sengupta D, Guha U, Mitra S, Ghosh S, Bhattacharjee S, Sengupta M.

Asian Pac J Cancer Prev. 2018 Aug 24;19(8):2071-2081. Review.

34.

Structure-Aware Principal Component Analysis for Single-Cell RNA-seq Data.

Lall S, Sinha D, Bandyopadhyay S, Sengupta D.

J Comput Biol. 2018 Aug 22. doi: 10.1089/cmb.2018.0027. [Epub ahead of print]

PMID:
30133312
35.

Switching to coformulated rilpivirine (RPV), emtricitabine (FTC) and tenofovir alafenamide from either RPV, FTC and tenofovir disoproxil fumarate (TDF) or efavirenz, FTC and TDF: 96-week results from two randomized clinical trials.

Hagins D, Orkin C, Daar ES, Mills A, Brinson C, DeJesus E, Post FA, Morales-Ramirez J, Thompson M, Osiyemi O, Rashbaum B, Stellbrink HJ, Martorell C, Liu H, Liu YP, Porter D, Collins SE, SenGupta D, Das M.

HIV Med. 2018 Nov;19(10):724-733. doi: 10.1111/hiv.12664. Epub 2018 Aug 12.

36.

Linkage of the ACR National Mammography Database to the Network of State Cancer Registries: Proof of Concept Evaluation by the ACR National Mammography Database Committee.

Zuley ML, Nishikawa RM, Lee CS, Burnside E, Rosenberg R, Sickles EA, Berg W, Leung J, Harvey J, Sengupta D, Gur D.

J Am Coll Radiol. 2019 Jan;16(1):8-14. doi: 10.1016/j.jacr.2018.06.027. Epub 2018 Aug 9.

37.

Association of Interleukin-1 beta and tumor necrosis factor-alpha genetic polymorphisms with gastric cancer in India.

Sultana Z, Bankura B, Pattanayak AK, Sengupta D, Sengupta M, Saha ML, Panda CK, Das M.

Environ Mol Mutagen. 2018 Aug;59(7):653-667. doi: 10.1002/em.22208. Epub 2018 Aug 9.

PMID:
30094865
38.

Noncontrast Head CT in Children: National Variation in Radiation Dose Indices in the United States.

Sadigh G, Kadom N, Karthik P, Sengupta D, Strauss KJ, Frush D, Applegate KE.

AJNR Am J Neuroradiol. 2018 Aug;39(8):1400-1405. doi: 10.3174/ajnr.A5719. Epub 2018 Jul 5.

PMID:
29976832
39.

Dynamics of loops at the substrate entry channel determine the specificity of iridoid synthases.

Sandholu AS, Mohole M, Duax WL, Thulasiram HV, Sengupta D, Kulkarni K.

FEBS Lett. 2018 Aug;592(15):2624-2635. doi: 10.1002/1873-3468.13174. Epub 2018 Jul 10.

PMID:
29944733
40.

Ferromagnetic Cr2Te3 nanorods with ultrahigh coercivity.

Wang F, Du J, Sun F, Sabirianov RF, Al-Aqtash N, Sengupta D, Zeng H, Xu X.

Nanoscale. 2018 Jun 14;10(23):11028-11033. doi: 10.1039/c8nr02272k.

PMID:
29872797
41.

Ligand Redox-Controlled Tandem Synthesis of Azines from Aromatic Alcohols and Hydrazine in Air: One-Pot Synthesis of Phthalazine.

Chakraborty M, Sengupta D, Saha T, Goswami S.

J Org Chem. 2018 Aug 3;83(15):7771-7778. doi: 10.1021/acs.joc.8b00661. Epub 2018 Jun 14.

PMID:
29869492
42.

An Azoaromatic Ligand as Four Electron Four Proton Reservoir: Catalytic Dehydrogenation of Alcohols by Its Zinc(II) Complex.

Pramanick R, Bhattacharjee R, Sengupta D, Datta A, Goswami S.

Inorg Chem. 2018 Jun 18;57(12):6816-6824. doi: 10.1021/acs.inorgchem.8b00034. Epub 2018 Jun 4.

PMID:
29863859
43.

CellAtlasSearch: a scalable search engine for single cells.

Srivastava D, Iyer A, Kumar V, Sengupta D.

Nucleic Acids Res. 2018 Jul 2;46(W1):W141-W147. doi: 10.1093/nar/gky421.

44.

African genetic diversity provides novel insights into evolutionary history and local adaptations.

Choudhury A, Aron S, Sengupta D, Hazelhurst S, Ramsay M.

Hum Mol Genet. 2018 Aug 1;27(R2):R209-R218. doi: 10.1093/hmg/ddy161. Review.

PMID:
29741686
45.

Exploring GPCR-Lipid Interactions by Molecular Dynamics Simulations: Excitements, Challenges, and the Way Forward.

Sengupta D, Prasanna X, Mohole M, Chattopadhyay A.

J Phys Chem B. 2018 Jun 7;122(22):5727-5737. doi: 10.1021/acs.jpcb.8b01657. Epub 2018 May 6.

PMID:
29685028
46.

Antagonistic activities of miR-148a and DNMT1: Ectopic expression of miR-148a impairs DNMT1 mRNA and dwindle cell proliferation and survival.

Sengupta D, Deb M, Patra SK.

Gene. 2018 Jun 20;660:68-79. doi: 10.1016/j.gene.2018.03.075. Epub 2018 Mar 26.

PMID:
29596883
47.

Development and characterization of a scintillating cell imaging dish for radioluminescence microscopy.

Sengupta D, Kim TJ, Almasi S, Miller S, Marton Z, Nagarkar V, Pratx G.

Analyst. 2018 Apr 16;143(8):1862-1869. doi: 10.1039/C8AN00106E.

48.

Submarine groundwater discharge derived strontium from the Bengal Basin traced in Bay of Bengal water samples.

Chakrabarti R, Mondal S, Acharya SS, Lekha JS, Sengupta D.

Sci Rep. 2018 Mar 12;8(1):4383. doi: 10.1038/s41598-018-22299-5.

49.

Deciphering the Dynamical Origin of Mixed Population during Neural Stem Cell Development.

Sengupta D, Kar S.

Biophys J. 2018 Feb 27;114(4):992-1004. doi: 10.1016/j.bpj.2017.12.035.

50.

Using a multi-method approach based on soil radon deficit, resistivity, and induced polarization measurements to monitor non-aqueous phase liquid contamination in two study areas in Italy and India.

Castelluccio M, Agrahari S, De Simone G, Pompilj F, Lucchetti C, Sengupta D, Galli G, Friello P, Curatolo P, Giorgi R, Tuccimei P.

Environ Sci Pollut Res Int. 2018 May;25(13):12515-12527. doi: 10.1007/s11356-018-1429-0. Epub 2018 Feb 20.

PMID:
29464601

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