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Items: 1 to 50 of 51

1.

Stable ultra-thin CdTe crystal: a robust direct gap semiconductor.

Iyikanat F, Akbali B, Kang J, Senger RT, Selamet Y, Sahin H.

J Phys Condens Matter. 2017 Dec 6;29(48):485302. doi: 10.1088/1361-648X/aa957e.

PMID:
29061916
2.

Hydrogenation-driven phase transition in single-layer TiSe2.

Iyikanat F, Kandemir A, Ozaydin HD, Senger RT, Sahin H.

Nanotechnology. 2017 Dec 8;28(49):495709. doi: 10.1088/1361-6528/aa94ab.

PMID:
29048331
3.

3D printed conformal microfluidics for isolation and profiling of biomarkers from whole organs.

Singh M, Tong Y, Webster K, Cesewski E, Haring AP, Laheri S, Carswell B, O'Brien TJ, Aardema CH, Senger RS, Robertson JL, Johnson BN.

Lab Chip. 2017 Jul 25;17(15):2561-2571. doi: 10.1039/c7lc00468k.

PMID:
28632265
4.

The Brazilian Registry of Adult Patient Undergoing Cardiovascular Surgery, the BYPASS Project: Results of the First 1,722 Patients.

Gomes WJ, Moreira RS, Zilli AC, Bettiati LC Jr, Figueira FAMDS, D' Azevedo SSP, Soares MJF, Fernandes MP, Ardito RV, Bogdan RAB, Campagnucci VP, Nakasako D, Kalil RAK, Rodrigues CG, Rodrigues AB Junior, Cascudo MM, Atik FA, Lima EB, Nina VJDS, Heluy RA, Azeredo LG, Henrique OS Junior, Mendonça JT, Silva KKOG, Pandolfo M, Lima JD Júnior, Faria RM, Santos JG, Paez RP, Coelho GHB, Pereira SN, Senger R, Buffolo E, Caputi GM, Santo JADE, Oliveira JAB, Berwanger O, Cavalcanti AB, Jatene FB.

Braz J Cardiovasc Surg. 2017 Mar-Apr;32(2):71-76. doi: 10.21470/1678-9741-2017-0053. Erratum in: Braz J Cardiovasc Surg. 2017 Sep-Oct;32(5):442.

5.

Modification of the Mycotoxin Deoxynivalenol Using Microorganisms Isolated from Environmental Samples.

Wilson NM, McMaster N, Gantulga D, Soyars C, McCormick SP, Knott K, Senger RS, Schmale DG.

Toxins (Basel). 2017 Apr 15;9(4). pii: E141. doi: 10.3390/toxins9040141.

6.

Quantum-Transport Characteristics of a p-n Junction on Single-Layer TiS3.

Iyikanat F, Senger RT, Peeters FM, Sahin H.

Chemphyschem. 2016 Dec 5;17(23):3985-3991. doi: 10.1002/cphc.201600751. Epub 2016 Oct 19.

PMID:
27685708
7.

Controlled growth mechanism of poly (3-hexylthiophene) nanowires.

Kiymaz D, Yagmurcukardes M, Tomak A, Sahin H, Senger RT, Peeters FM, Zareie HM, Zafer C.

Nanotechnology. 2016 Nov 11;27(45):455604. Epub 2016 Oct 11.

PMID:
27727143
8.

Characterization of an evolved carotenoids hyper-producer of Saccharomyces cerevisiae through bioreactor parameter optimization and Raman spectroscopy.

Olson ML, Johnson J, Carswell WF, Reyes LH, Senger RS, Kao KC.

J Ind Microbiol Biotechnol. 2016 Oct;43(10):1355-63. doi: 10.1007/s10295-016-1808-9. Epub 2016 Jul 16.

PMID:
27423881
9.

Structural changes in a Schiff base molecular assembly initiated by scanning tunneling microscopy tip.

Tomak A, Bacaksiz C, Mendirek G, Sahin H, Hur D, Görgün K, Senger RT, Birer Ö, Peeters FM, Zareie HM.

Nanotechnology. 2016 Aug 19;27(33):335601. doi: 10.1088/0957-4484/27/33/335601. Epub 2016 Jul 5.

PMID:
27378765
10.

Comparison of two technics of cardiopulmonary bypass (conventional and mini CPB) in the trans-and postoperative periods of cardiac surgery.

Pereira SN, Zumba IB, Batista MS, Pieve Dd, Santos Ed, Stuermer R, Oliveira GP, Senger R.

Rev Bras Cir Cardiovasc. 2015 Jul-Aug;30(4):433-42. doi: 10.5935/1678-9741.20150046.

11.

Raman spectroscopy detects phenotypic differences among Escherichia coli enriched for 1-butanol tolerance using a metagenomic DNA library.

Freedman BG, Zu TN, Wallace RS, Senger RS.

Biotechnol J. 2016 Jul;11(7):877-89. doi: 10.1002/biot.201500144. Epub 2016 Mar 15.

PMID:
26814030
12.

Nitrogenated, phosphorated and arsenicated monolayer holey graphenes.

Yagmurcukardes M, Horzum S, Torun E, Peeters FM, Senger RT.

Phys Chem Chem Phys. 2016 Jan 28;18(4):3144-50. doi: 10.1039/c5cp05538e.

PMID:
26744752
13.

Do genome-scale models need exact solvers or clearer standards?

Ebrahim A, Almaas E, Bauer E, Bordbar A, Burgard AP, Chang RL, Dräger A, Famili I, Feist AM, Fleming RM, Fong SS, Hatzimanikatis V, Herrgård MJ, Holder A, Hucka M, Hyduke D, Jamshidi N, Lee SY, Le Novère N, Lerman JA, Lewis NE, Ma D, Mahadevan R, Maranas C, Nagarajan H, Navid A, Nielsen J, Nielsen LK, Nogales J, Noronha A, Pal C, Palsson BO, Papin JA, Patil KR, Price ND, Reed JL, Saunders M, Senger RS, Sonnenschein N, Sun Y, Thiele I.

Mol Syst Biol. 2015 Oct 14;11(10):831. doi: 10.15252/msb.20156157. No abstract available.

14.

High-yield hydrogen production from biomass by in vitro metabolic engineering: Mixed sugars coutilization and kinetic modeling.

Rollin JA, Martin del Campo J, Myung S, Sun F, You C, Bakovic A, Castro R, Chandrayan SK, Wu CH, Adams MW, Senger RS, Zhang YH.

Proc Natl Acad Sci U S A. 2015 Apr 21;112(16):4964-9. doi: 10.1073/pnas.1417719112. Epub 2015 Apr 6.

15.

A review of metabolic and enzymatic engineering strategies for designing and optimizing performance of microbial cell factories.

Fisher AK, Freedman BG, Bevan DR, Senger RS.

Comput Struct Biotechnol J. 2014 Sep 3;11(18):91-9. doi: 10.1016/j.csbj.2014.08.010. eCollection 2014 Aug. Review.

16.

Near-real-time analysis of the phenotypic responses of Escherichia coli to 1-butanol exposure using Raman Spectroscopy.

Zu TN, Athamneh AI, Wallace RS, Collakova E, Senger RS.

J Bacteriol. 2014 Dec;196(23):3983-91. doi: 10.1128/JB.01590-14. Epub 2014 Aug 25.

17.

Transport of magnesium by a bacterial Nramp-related gene.

Shin JH, Wakeman CA, Goodson JR, Rodionov DA, Freedman BG, Senger RS, Winkler WC.

PLoS Genet. 2014 Jun 26;10(6):e1004429. doi: 10.1371/journal.pgen.1004429. eCollection 2014 Jun.

18.

Designing novel cellulase systems through agent-based modeling and global sensitivity analysis.

Apte AA, Senger RS, Fong SS.

Bioengineered. 2014 Jul-Aug;5(4):243-53. doi: 10.4161/bioe.29160. Epub 2014 May 15.

19.

Phenotypic profiling of antibiotic response signatures in Escherichia coli using Raman spectroscopy.

Athamneh AI, Alajlouni RA, Wallace RS, Seleem MN, Senger RS.

Antimicrob Agents Chemother. 2014;58(3):1302-14. doi: 10.1128/AAC.02098-13. Epub 2013 Dec 2.

20.

Impact of autologous blood transfusion on the use of pack of red blood cells in coronary artery bypass grafting surgery.

Silva LL, Andres AJ, Senger R, Stuermer R, Godoy MC, Correa EF, Cóser VM.

Rev Bras Cir Cardiovasc. 2013 Jun;28(2):183-9. doi: 10.5935/1678-9741.20130027.

PMID:
23939314
21.

Deriving metabolic engineering strategies from genome-scale modeling with flux ratio constraints.

Yen JY, Nazem-Bokaee H, Freedman BG, Athamneh AI, Senger RS.

Biotechnol J. 2013 May;8(5):581-94. doi: 10.1002/biot.201200234. Epub 2013 Apr 11.

PMID:
23460591
22.

Resolving cell composition through simple measurements, genome-scale modeling, and a genetic algorithm.

Senger RS, Nazem-Bokaee H.

Methods Mol Biol. 2013;985:85-101. doi: 10.1007/978-1-62703-299-5_5.

PMID:
23417800
23.

Peptide-guided surface-enhanced Raman scattering probes for localized cell composition analysis.

Athamneh AI, Senger RS.

Appl Environ Microbiol. 2012 Nov;78(21):7805-8. doi: 10.1128/AEM.02000-12. Epub 2012 Aug 24.

24.

Are we ready for genome-scale modeling in plants?

Collakova E, Yen JY, Senger RS.

Plant Sci. 2012 Aug;191-192:53-70. doi: 10.1016/j.plantsci.2012.04.010. Epub 2012 May 3. Review.

25.

Genome-scale modeling using flux ratio constraints to enable metabolic engineering of clostridial metabolism in silico.

McAnulty MJ, Yen JY, Freedman BG, Senger RS.

BMC Syst Biol. 2012 May 14;6:42. doi: 10.1186/1752-0509-6-42.

26.

Metabolic network reconstruction and genome-scale model of butanol-producing strain Clostridium beijerinckii NCIMB 8052.

Milne CB, Eddy JA, Raju R, Ardekani S, Kim PJ, Senger RS, Jin YS, Blaschek HP, Price ND.

BMC Syst Biol. 2011 Aug 16;5:130. doi: 10.1186/1752-0509-5-130.

27.

Biofuel production improvement with genome-scale models: The role of cell composition.

Senger RS.

Biotechnol J. 2010 Jul;5(7):671-85. doi: 10.1002/biot.201000007. Review.

PMID:
20540108
28.

Computational approaches in metabolic engineering.

Reed JL, Senger RS, Antoniewicz MR, Young JD.

J Biomed Biotechnol. 2010;2010:207414. doi: 10.1155/2010/207414. Epub 2011 Apr 7. No abstract available.

29.

Microarray-based gene expression analysis as a process characterization tool to establish comparability of complex biological products: scale-up of a whole-cell immunotherapy product.

Wang M, Senger RS, Paredes C, Banik GG, Lin A, Papoutsakis ET.

Biotechnol Bioeng. 2009 Nov 1;104(4):796-808. doi: 10.1002/bit.22441.

PMID:
19591186
30.

Genome-scale model for Clostridium acetobutylicum: Part I. Metabolic network resolution and analysis.

Senger RS, Papoutsakis ET.

Biotechnol Bioeng. 2008 Dec 1;101(5):1036-52. doi: 10.1002/bit.22010.

31.
32.

The transcriptional program underlying the physiology of clostridial sporulation.

Jones SW, Paredes CJ, Tracy B, Cheng N, Sillers R, Senger RS, Papoutsakis ET.

Genome Biol. 2008;9(7):R114. doi: 10.1186/gb-2008-9-7-r114. Epub 2008 Jul 16.

33.

Prediction of N-linked glycan branching patterns using artificial neural networks.

Senger RS, Karim MN.

Math Biosci. 2008 Jan;211(1):89-104. Epub 2007 Oct 30.

PMID:
18054050
34.

A general framework for designing and validating oligomer-based DNA microarrays and its application to Clostridium acetobutylicum.

Paredes CJ, Senger RS, Spath IS, Borden JR, Sillers R, Papoutsakis ET.

Appl Environ Microbiol. 2007 Jul;73(14):4631-8. Epub 2007 May 25.

36.

Development of a culture sub-population induction model: signaling pathways synergy and taxanes production by Taxus canadensis.

Senger RS, Phisalaphong M, Karim MN, Linden JC.

Biotechnol Prog. 2006 Nov-Dec;22(6):1671-82.

PMID:
17137317
37.

Size-dependent alternation of magnetoresistive properties in atomic chains.

Durgun E, Senger RT, Mehrez H, Sevinçli H, Ciraci S.

J Chem Phys. 2006 Sep 28;125(12):121102.

PMID:
17014158
38.

Variable site-occupancy classification of N-linked glycosylation using artificial neural networks.

Senger RS, Karim MN.

Biotechnol Prog. 2005 Nov-Dec;21(6):1653-62.

PMID:
16321048
39.

Atomic and electronic structure of carbon strings.

Tongay S, Dag S, Durgun E, Senger RT, Ciraci S.

J Phys Condens Matter. 2005 Jun 29;17(25):3823-36. doi: 10.1088/0953-8984/17/25/009. Epub 2005 Jun 10.

PMID:
21690699
40.

Chiral single-wall gold nanotubes.

Senger RT, Dag S, Ciraci S.

Phys Rev Lett. 2004 Nov 5;93(19):196807. Epub 2004 Nov 5.

PMID:
15600867
41.

Ab-initio electron transport calculations of carbon based string structures.

Tongay S, Senger RT, Dag S, Ciraci S.

Phys Rev Lett. 2004 Sep 24;93(13):136404. Epub 2004 Sep 23.

PMID:
15524745
43.
44.

Hyperdense intracranial epidermoid: an uncommon presentation.

Gupta S, Vaishya ND, Senger RL.

Neurol India. 2000 Jun;48(2):158-60.

45.

Wandering intraspinal bullet.

Gupta S, Senger RL.

Br J Neurosurg. 1999 Dec;13(6):606-7.

PMID:
10715734
46.

Ground-state description of quasi-one-dimensional polarons with arbitrary electron-phonon coupling strength.

Erçelebi A, Senger RT.

Phys Rev B Condens Matter. 1996 Apr 15;53(16):11008-11015. No abstract available.

PMID:
9982673
47.

Determination of the affinity of talin and vinculin to charged lipid vesicles: a light scatter study.

Goldmann WH, Senger R, Kaufmann S, Isenberg G.

FEBS Lett. 1995 Jul 24;368(3):516-8.

48.

The influence of cations on the polymerization of actin and actin in the presence of alpha-actinin/filamin.

Senger R, Goldmann WH, Isenberg G.

Biochem Soc Trans. 1995 Feb;23(1):57S. No abstract available.

PMID:
7758772
49.
50.

Analysis of filamin-actin binding and cross-linking/bundling by kinetic method.

Goldmann WH, Senger R, Isenberg G.

Biochem Biophys Res Commun. 1994 Aug 30;203(1):338-43.

PMID:
8074676

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