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Items: 1 to 50 of 349

1.

GrainGenes: centralized small grain resources and digital platform for geneticists and breeders.

Blake VC, Woodhouse MR, Lazo GR, Odell SG, Wight CP, Tinker NA, Wang Y, Gu YQ, Birkett CL, Jannink JL, Matthews DE, Hane DL, Michel SL, Yao E, Sen TZ.

Database (Oxford). 2019 Jan 1;2019. pii: baz065. doi: 10.1093/database/baz065.

2.

Histone deacetylase 4 downregulation elicits post-traumatic psychiatric disorders through impairment of neurogenesis.

Saha P, Gupta RK, Sen T, Sen N.

J Neurotrauma. 2019 Jun 6. doi: 10.1089/neu.2019.6373. [Epub ahead of print]

PMID:
31169064
3.

Corrigendum to "An augmentation in histone dimethylation at lysine nine residues elicits vision impairment following traumatic brain injury" [Free Radic. Biol. Med. (2019 Feb 18) 134 630-643].

Gupta R, Saha P, Sen T, Sen N.

Free Radic Biol Med. 2019 May 20;136:184-185. doi: 10.1016/j.freeradbiomed.2019.04.010. Epub 2019 Apr 16. No abstract available.

PMID:
31003850
4.

PedigreeNet: A Web-based Pedigree Viewer for Biological Databases.

Braun BL, Schott DA, Portwood JL, Andorf CM, Sen TZ.

Bioinformatics. 2019 Mar 23. pii: btz208. doi: 10.1093/bioinformatics/btz208. [Epub ahead of print]

PMID:
30903182
5.

Microbial Pigments in the Food Industry-Challenges and the Way Forward.

Sen T, Barrow CJ, Deshmukh SK.

Front Nutr. 2019 Mar 5;6:7. doi: 10.3389/fnut.2019.00007. eCollection 2019. Review.

6.

An augmentation in histone dimethylation at lysine nine residues elicits vision impairment following traumatic brain injury.

Gupta R, Saha P, Sen T, Sen N.

Free Radic Biol Med. 2019 Apr;134:630-643. doi: 10.1016/j.freeradbiomed.2019.02.015. Epub 2019 Feb 18. Erratum in: Free Radic Biol Med. 2019 May 20;136:184-185.

7.

Targeting DNA Damage Response Promotes Antitumor Immunity through STING-Mediated T-cell Activation in Small Cell Lung Cancer.

Sen T, Rodriguez BL, Chen L, Corte CMD, Morikawa N, Fujimoto J, Cristea S, Nguyen T, Diao L, Li L, Fan Y, Yang Y, Wang J, Glisson BS, Wistuba II, Sage J, Heymach JV, Gibbons DL, Byers LA.

Cancer Discov. 2019 May;9(5):646-661. doi: 10.1158/2159-8290.CD-18-1020. Epub 2019 Feb 18.

PMID:
30777870
8.

Internal surface electric charge characterization of mesoporous silica.

Sen T, Barisik M.

Sci Rep. 2019 Jan 15;9(1):137. doi: 10.1038/s41598-018-36487-w.

9.

Structural dynamics of lytic polysaccharide monoxygenases reveals a highly flexible substrate binding region.

Arora R, Bharval P, Sarswati S, Sen TZ, Yennamalli RM.

J Mol Graph Model. 2019 May;88:1-10. doi: 10.1016/j.jmgm.2018.12.012. Epub 2018 Dec 29.

10.

Phenalenyl Based Aluminum Compound for Catalytic C-H Arylation of Arene and Heteroarenes at Room Temperature.

Vardhanapu PK, Ahmed J, Jose A, Shaw BK, Sen TK, Mathews AA, Mandal SK.

J Org Chem. 2019 Jan 4;84(1):289-299. doi: 10.1021/acs.joc.8b02699. Epub 2018 Dec 26.

PMID:
30507198
11.

Hierarchical porous TiO2 single crystals templated from partly glassified polystyrene.

Guo H, Sen T, Zhang J, Wang L.

J Colloid Interface Sci. 2019 Mar 7;538:248-255. doi: 10.1016/j.jcis.2018.11.067. Epub 2018 Nov 19.

PMID:
30513466
12.

MaizeGDB 2018: the maize multi-genome genetics and genomics database.

Portwood JL 2nd, Woodhouse MR, Cannon EK, Gardiner JM, Harper LC, Schaeffer ML, Walsh JR, Sen TZ, Cho KT, Schott DA, Braun BL, Dietze M, Dunfee B, Elsik CG, Manchanda N, Coe E, Sachs M, Stinard P, Tolbert J, Zimmerman S, Andorf CM.

Nucleic Acids Res. 2019 Jan 8;47(D1):D1146-D1154. doi: 10.1093/nar/gky1046.

13.

Comparison of quantitative and qualitative coronary angiography: computer versus the eye.

Sen T, Kilit C, Astarcioglu MA, Asarcikli LD, Aksu T, Kafes H, Parspur A, Gozubuyuk G, Amasyali B.

Cardiovasc J Afr. 2018 Sep/Oct;29(5):278-282. doi: 10.5830/CVJA-2018-024.

PMID:
30395141
14.

Differential Sensitivity Analysis for Resistant Malignancies (DISARM) Identifies Common Candidate Therapies across Platinum-Resistant Cancers.

Gay CM, Tong P, Cardnell RJ, Sen T, Su X, Ma J, Bara RO, Johnson FM, Wakefield C, Heymach JV, Wang J, Byers LA.

Clin Cancer Res. 2019 Jan 1;25(1):346-357. doi: 10.1158/1078-0432.CCR-18-1129. Epub 2018 Sep 26.

PMID:
30257981
15.

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.

Harper L, Campbell J, Cannon EKS, Jung S, Poelchau M, Walls R, Andorf C, Arnaud E, Berardini TZ, Birkett C, Cannon S, Carson J, Condon B, Cooper L, Dunn N, Elsik CG, Farmer A, Ficklin SP, Grant D, Grau E, Herndon N, Hu ZL, Humann J, Jaiswal P, Jonquet C, Laporte MA, Larmande P, Lazo G, McCarthy F, Menda N, Mungall CJ, Munoz-Torres MC, Naithani S, Nelson R, Nesdill D, Park C, Reecy J, Reiser L, Sanderson LA, Sen TZ, Staton M, Subramaniam S, Tello-Ruiz MK, Unda V, Unni D, Wang L, Ware D, Wegrzyn J, Williams J, Woodhouse M, Yu J, Main D.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay088.

16.

Efflux pump inhibition by 11H-pyrido[2,1-b]quinazolin-11-one analogues in mycobacteria.

Sen T, Neog K, Sarma S, Manna P, Deka Boruah HP, Gogoi P, Singh AK.

Bioorg Med Chem. 2018 Sep 15;26(17):4942-4951. doi: 10.1016/j.bmc.2018.08.034. Epub 2018 Aug 29.

PMID:
30190182
17.

Activation of cyclin D1 affects mitochondrial mass following traumatic brain injury.

Saha P, Gupta R, Sen T, Sen N.

Neurobiol Dis. 2018 Oct;118:108-116. doi: 10.1016/j.nbd.2018.07.010. Epub 2018 Jul 18.

18.

Measuring urinary 8-hydroxy-2'-deoxyguanosine and malondialdehyde levels in women with overactive bladder.

Dokumacioglu E, Demiray O, Dokumacioglu A, Sahin A, Sen TM, Cankaya S.

Investig Clin Urol. 2018 Jul;59(4):252-256. doi: 10.4111/icu.2018.59.4.252. Epub 2018 Jun 14.

19.

Integrated transcriptomic and epigenomic analysis of ovarian cancer reveals epigenetically silenced GULP1.

Maldonado L, Brait M, Izumchenko E, Begum S, Chatterjee A, Sen T, Loyo M, Barbosa A, Poeta ML, Makarev E, Zhavoronkov A, Fazio VM, Angioli R, Rabitti C, Ongenaert M, Van Criekinge W, Noordhuis MG, de Graeff P, Wisman GBA, van der Zee AGJ, Hoque MO.

Cancer Lett. 2018 Oct 1;433:242-251. doi: 10.1016/j.canlet.2018.06.030. Epub 2018 Jun 28.

PMID:
29964205
20.

A comprehensive review on rheological studies of sludge from various sections of municipal wastewater treatment plants for enhancement of process performance.

Hong E, Yeneneh AM, Sen TK, Ang HM, Kayaalp A.

Adv Colloid Interface Sci. 2018 Jul;257:19-30. doi: 10.1016/j.cis.2018.06.002. Epub 2018 Jun 15. Review.

PMID:
29925466
21.

Performance and dynamic modelling of biochar and kaolin packed bed adsorption column for aqueous phase methylene blue (MB) dye removal.

Dawood S, Sen TK, Phan C.

Environ Technol. 2018 Jun 26:1-11. doi: 10.1080/09593330.2018.1491065. [Epub ahead of print]

PMID:
29916334
22.

Size dependent surface charge properties of silica nano-channels: double layer overlap and inlet/outlet effects.

Sen T, Barisik M.

Phys Chem Chem Phys. 2018 Jun 20;20(24):16719-16728. doi: 10.1039/c8cp01906a.

PMID:
29881843
23.

The Effects of Hesperidin and Quercetin on Serum Tumor Necrosis Factor-Alpha and Interleukin-6 Levels in Streptozotocin-induced Diabetes Model.

Dokumacioglu E, Iskender H, Sen TM, Ince I, Dokumacioglu A, Kanbay Y, Erbas E, Saral S.

Pharmacogn Mag. 2018 Apr-Jun;14(54):167-173. doi: 10.4103/pm.pm_41_17. Epub 2018 Apr 10.

24.

An unusual case of hoarseness of voice.

Singh R, Sen T, Pattari S.

Respir Med Case Rep. 2018 Feb 2;23:128-130. doi: 10.1016/j.rmcr.2018.01.013. eCollection 2018.

25.

SNPversity: a web-based tool for visualizing diversity.

Schott DA, Vinnakota AG, Portwood JL 2nd, Andorf CM, Sen TZ.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay037.

26.

Pyridinium Analogues of Green Fluorescent Protein Chromophore: Fluorogenic Dyes with Large Solvent-Dependent Stokes Shift.

Ermakova YG, Sen T, Bogdanova YA, Smirnov AY, Baleeva NS, Krylov AI, Baranov MS.

J Phys Chem Lett. 2018 Apr 19;9(8):1958-1963. doi: 10.1021/acs.jpclett.8b00512. Epub 2018 Apr 5.

PMID:
29589942
27.

Nitrosylation of GAPDH augments pathological tau acetylation upon exposure to amyloid-β.

Sen T, Saha P, Sen N.

Sci Signal. 2018 Mar 20;11(522). pii: eaao6765. doi: 10.1126/scisignal.aao6765.

28.

Targeting DNA damage repair in small cell lung cancer and the biomarker landscape.

Sen T, Gay CM, Byers LA.

Transl Lung Cancer Res. 2018 Feb;7(1):50-68. doi: 10.21037/tlcr.2018.02.03. Review.

29.

A Novel Therapeutic Strategy for Cancer Using Phosphatidylserine Targeting Stearylamine-Bearing Cationic Liposomes.

De M, Ghosh S, Sen T, Shadab M, Banerjee I, Basu S, Ali N.

Mol Ther Nucleic Acids. 2018 Mar 2;10:9-27. doi: 10.1016/j.omtn.2017.10.019. Epub 2017 Nov 1.

30.

Synthesis of molecular imprinting polymers for extraction of gallic acid from urine.

Bhawani SA, Sen TS, Ibrahim MNM.

Chem Cent J. 2018 Feb 21;12(1):19. doi: 10.1186/s13065-018-0392-7.

31.

Functions for fission yeast splicing factors SpSlu7 and SpPrp18 in alternative splice-site choice and stress-specific regulated splicing.

Melangath G, Sen T, Kumar R, Bawa P, Srinivasan S, Vijayraghavan U.

PLoS One. 2017 Dec 13;12(12):e0188159. doi: 10.1371/journal.pone.0188159. eCollection 2017.

32.

Molecular characterization of locus of enterocyte effacement pathogenicity island in shigatoxic Escherichia coli isolated from human & cattle in West Bengal, India.

Das SC, Ramamurthy T, Ghosh S, Pazhani GP, Sen T, Singh R.

Indian J Med Res. 2017 Jul;146(Supplement):S30-S37. doi: 10.4103/ijmr.IJMR_1877_15.

33.

DNA Origami Directed Au Nanostar Dimers for Single-Molecule Surface-Enhanced Raman Scattering.

Tanwar S, Haldar KK, Sen T.

J Am Chem Soc. 2017 Dec 6;139(48):17639-17648. doi: 10.1021/jacs.7b10410. Epub 2017 Nov 22.

PMID:
29129049
34.

Protein expression of TTF1 and cMYC define distinct molecular subgroups of small cell lung cancer with unique vulnerabilities to aurora kinase inhibition, DLL3 targeting, and other targeted therapies.

Cardnell RJ, Li L, Sen T, Bara R, Tong P, Fujimoto J, Ireland AS, Guthrie MR, Bheddah S, Banerjee U, Kalu NN, Fan YH, Dylla SJ, Johnson FM, Wistuba II, Oliver TG, Heymach JV, Glisson BS, Wang J, Byers LA.

Oncotarget. 2017 Sep 1;8(43):73419-73432. doi: 10.18632/oncotarget.20621. eCollection 2017 Sep 26.

35.

High prevalence of candiduria due to non-albicans Candida species among diabetic patients: A matter of concern?

Esmailzadeh A, Zarrinfar H, Fata A, Sen T.

J Clin Lab Anal. 2018 May;32(4):e22343. doi: 10.1002/jcla.22343. Epub 2017 Oct 27.

PMID:
29076587
36.

The effect of sulforaphane on oxidative stress and inflammation in rats with toxic hepatitis induced by acetaminophene.

Dokumacioglu E, Iskender H, Aktas MS, Hanedan B, Dokumacioglu A, Sen TM, Musmul A.

Bratisl Lek Listy. 2017;118(8):453-459. doi: 10.4149/BLL_2017_088.

PMID:
29050482
37.

The impact of antidepressant treatment on brain-derived neurotrophic factor level: An evidence-based approach through systematic review and meta-analysis.

Arumugam V, John VS, Augustine N, Jacob T, Joy SM, Sen S, Sen T.

Indian J Pharmacol. 2017 May-Jun;49(3):236-242. doi: 10.4103/ijp.IJP_700_16.

38.

Squamous Cell Carcinoma Penis in a Case of Urethral Stricture Due to Lichen Sclerosus Balanitis Xerotica Obliterans: A Case Report and Review of Literature.

Taneja Y, Ram P, Dhaked SK, Sen TK.

J Clin Diagn Res. 2017 Jul;11(7):PD17-PD18. doi: 10.7860/JCDR/2017/26330.10254. Epub 2017 Jul 1.

39.

Effect of human placental extract in the management of biofilm mediated drug resistance - A focus on wound management.

Goswami S, Sarkar R, Saha P, Maity A, Sarkar T, Das D, Chakraborty PD, Bandyopadhyay S, Ghosh CK, Karmakar S, Sen T.

Microb Pathog. 2017 Oct;111:307-315. doi: 10.1016/j.micpath.2017.08.041. Epub 2017 Sep 1.

PMID:
28867635
40.
41.

Targeting AXL and mTOR Pathway Overcomes Primary and Acquired Resistance to WEE1 Inhibition in Small-Cell Lung Cancer.

Sen T, Tong P, Diao L, Li L, Fan Y, Hoff J, Heymach JV, Wang J, Byers LA.

Clin Cancer Res. 2017 Oct 15;23(20):6239-6253. doi: 10.1158/1078-0432.CCR-17-1284. Epub 2017 Jul 11.

42.

Surveying the Maize community for their diversity and pedigree visualization needs to prioritize tool development and curation.

Sen TZ, Braun BL, Schott DA, Portwood Ii JL, Schaeffer ML, Harper LC, Gardiner JM, Cannon EK, Andorf CM.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax031.

43.

One-year results of primary stenting for TASC II D lesions of the superficial femoral and popliteal arteries.

Astarcıoglu MA, Kılıt C, Sen T, Durmus HI, Kalcık M, Gursoy MO, Yesın M, Asarcıklı LD, Gozubuyuk G, Amasyalı B.

Acta Cardiol. 2017 Feb;72(1):36-40. doi: 10.1080/00015385.2017.1281521.

PMID:
28597743
44.

Activation of PERK Elicits Memory Impairment through Inactivation of CREB and Downregulation of PSD95 After Traumatic Brain Injury.

Sen T, Gupta R, Kaiser H, Sen N.

J Neurosci. 2017 Jun 14;37(24):5900-5911. doi: 10.1523/JNEUROSCI.2343-16.2017. Epub 2017 May 18.

45.

CHK1 Inhibition in Small-Cell Lung Cancer Produces Single-Agent Activity in Biomarker-Defined Disease Subsets and Combination Activity with Cisplatin or Olaparib.

Sen T, Tong P, Stewart CA, Cristea S, Valliani A, Shames DS, Redwood AB, Fan YH, Li L, Glisson BS, Minna JD, Sage J, Gibbons DL, Piwnica-Worms H, Heymach JV, Wang J, Byers LA.

Cancer Res. 2017 Jul 15;77(14):3870-3884. doi: 10.1158/0008-5472.CAN-16-3409. Epub 2017 May 10.

46.

The effect of hesperidin and quercetin on oxidative stress, NF-κB and SIRT1 levels in a STZ-induced experimental diabetes model.

Iskender H, Dokumacioglu E, Sen TM, Ince I, Kanbay Y, Saral S.

Biomed Pharmacother. 2017 Jun;90:500-508. doi: 10.1016/j.biopha.2017.03.102. Epub 2017 Apr 7.

PMID:
28395272
47.

Energy-dense diet triggers changes in gut microbiota, reorganization of gut‑brain vagal communication and increases body fat accumulation.

Vaughn AC, Cooper EM, DiLorenzo PM, O'Loughlin LJ, Konkel ME, Peters JH, Hajnal A, Sen T, Lee SH, de La Serre CB, Czaja K.

Acta Neurobiol Exp (Wars). 2017;77(1):18-30.

48.

Diet-driven microbiota dysbiosis is associated with vagal remodeling and obesity.

Sen T, Cawthon CR, Ihde BT, Hajnal A, DiLorenzo PM, de La Serre CB, Czaja K.

Physiol Behav. 2017 May 1;173:305-317. doi: 10.1016/j.physbeh.2017.02.027. Epub 2017 Feb 27.

49.

Dynamic variations in epithelial-to-mesenchymal transition (EMT), ATM, and SLFN11 govern response to PARP inhibitors and cisplatin in small cell lung cancer.

Allison Stewart C, Tong P, Cardnell RJ, Sen T, Li L, Gay CM, Masrorpour F, Fan Y, Bara RO, Feng Y, Ru Y, Fujimoto J, Kundu ST, Post LE, Yu K, Shen Y, Glisson BS, Wistuba I, Heymach JV, Gibbons DL, Wang J, Byers LA.

Oncotarget. 2017 Apr 25;8(17):28575-28587. doi: 10.18632/oncotarget.15338.

50.

Stepwise case selection using Guy's stone score reduces complications during percutaneous nephrolithotomy training.

Jaipuria J, Suryavanshi M, Desai AP, Goyal S, Patel K, Parhad SS, Subudhi SK, Rao CV, Kumar SP, Sen TK.

Indian J Urol. 2017 Jan-Mar;33(1):41-47. doi: 10.4103/0970-1591.195757.

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