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Items: 34

1.

Protein Interaction with Charged Macromolecules: From Model Polymers to Unfolded Proteins and Post-Translational Modifications.

Semenyuk P, Muronetz V.

Int J Mol Sci. 2019 Mar 12;20(5). pii: E1252. doi: 10.3390/ijms20051252. Review.

2.

Glycation of α-synuclein amplifies the binding with glyceraldehyde-3-phosphate dehydrogenase.

Semenyuk P, Barinova K, Muronetz V.

Int J Biol Macromol. 2019 Apr 15;127:278-285. doi: 10.1016/j.ijbiomac.2019.01.064. Epub 2019 Jan 15.

PMID:
30658140
3.

Artificial chaperones based on thermoresponsive polymers recognize the unfolded state of the protein.

Semenyuk P, Tiainen T, Hietala S, Tenhu H, Aseyev V, Muronetz V.

Int J Biol Macromol. 2019 Jan;121:536-545. doi: 10.1016/j.ijbiomac.2018.10.031. Epub 2018 Oct 9.

PMID:
30312700
4.

Tightly bound polyelectrolytes enhance enzyme proteolysis and destroy amyloid aggregates.

Evstafyeva DB, Izumrudov VA, Muronetz VI, Semenyuk PI.

Soft Matter. 2018 May 16;14(19):3768-3773. doi: 10.1039/c8sm00101d.

PMID:
29707711
5.

Binding of alpha-synuclein to partially oxidized glyceraldehyde-3-phosphate dehydrogenase induces subsequent inactivation of the enzyme.

Barinova K, Khomyakova E, Semenyuk P, Schmalhausen E, Muronetz V.

Arch Biochem Biophys. 2018 Mar 15;642:10-22. doi: 10.1016/j.abb.2018.02.002. Epub 2018 Feb 3.

PMID:
29408361
6.

Sensitizing tumor cells to conventional drugs: HSP70 chaperone inhibitors, their selection and application in cancer models.

Lazarev VF, Sverchinsky DV, Mikhaylova ER, Semenyuk PI, Komarova EY, Niskanen SA, Nikotina AD, Burakov AV, Kartsev VG, Guzhova IV, Margulis BA.

Cell Death Dis. 2018 Jan 18;9(2):41. doi: 10.1038/s41419-017-0160-y.

7.

The unique two-component tail sheath of giant Pseudomonas phage PaBG.

Kurochkina LP, Semenyuk PI, Sykilinda NN, Miroshnikov KA.

Virology. 2018 Feb;515:46-51. doi: 10.1016/j.virol.2017.12.010. Epub 2017 Dec 18.

8.

Peptide fragments of Hsp70 modulate its chaperone activity and sensitize tumor cells to anti-cancer drugs.

Sverchinsky DV, Lazarev VF, Semenyuk PI, Mitkevich VA, Guzhova IV, Margulis BA.

FEBS Lett. 2017 Dec;591(24):4074-4082. doi: 10.1002/1873-3468.12913. Epub 2017 Dec 3.

9.

Chaperone-like activity of synthetic polyanions can be higher than the activity of natural chaperones at elevated temperature.

Semenyuk PI, Kurochkina LP, Gusev NB, Izumrudov VA, Muronetz VI.

Biochem Biophys Res Commun. 2017 Jul 22;489(2):200-205. doi: 10.1016/j.bbrc.2017.05.128. Epub 2017 May 24.

PMID:
28551403
10.

Structural Properties of Potexvirus Coat Proteins Detected by Optical Methods.

Semenyuk PI, Karpova OV, Ksenofontov AL, Kalinina NO, Dobrov EN, Makarov VV.

Biochemistry (Mosc). 2016 Dec;81(12):1522-1530. doi: 10.1134/S0006297916120130.

PMID:
28259129
11.

New GroEL-like chaperonin of bacteriophage OBP Pseudomonas fluorescens suppresses thermal protein aggregation in an ATP-dependent manner.

Semenyuk PI, Orlov VN, Sokolova OS, Kurochkina LP.

Biochem J. 2016 Aug 1;473(15):2383-93. doi: 10.1042/BCJ20160367. Epub 2016 May 31.

PMID:
27247423
12.

Glyceraldehyde-3-phosphate dehydrogenase: Aggregation mechanisms and impact on amyloid neurodegenerative diseases.

Muronetz VI, Barinova KV, Stroylova YY, Semenyuk PI, Schmalhausen EV.

Int J Biol Macromol. 2017 Jul;100:55-66. doi: 10.1016/j.ijbiomac.2016.05.066. Epub 2016 May 20. Review.

PMID:
27215901
13.

Properties of substances inhibiting aggregation of oxidized GAPDH: Data on the interaction with the enzyme and the impact on its intracellular content.

Lazarev VF, Nikotina AD, Semenyuk PI, Evstafyeva DB, Mikhaylova ER, Muronetz VI, Shevtsov MA, Tolkacheva AV, Dobrodumov AV, Shavarda AL, Guzhova IV, Margulis BA.

Data Brief. 2016 Feb 27;7:524-8. doi: 10.1016/j.dib.2016.02.054. eCollection 2016 Jun.

14.

Small molecules preventing GAPDH aggregation are therapeutically applicable in cell and rat models of oxidative stress.

Lazarev VF, Nikotina AD, Semenyuk PI, Evstafyeva DB, Mikhaylova ER, Muronetz VI, Shevtsov MA, Tolkacheva AV, Dobrodumov AV, Shavarda AL, Guzhova IV, Margulis BA.

Free Radic Biol Med. 2016 Mar;92:29-38. doi: 10.1016/j.freeradbiomed.2015.12.025. Epub 2015 Dec 31.

PMID:
26748070
15.

Affinity of the heparin binding motif of Noggin1 to heparan sulfate and its visualization in the embryonic tissues.

Nesterenko AM, Orlov EE, Ermakova GV, Ivanov IA, Semenyuk PI, Orlov VN, Martynova NY, Zaraisky AG.

Biochem Biophys Res Commun. 2015 Dec 4-11;468(1-2):331-6. doi: 10.1016/j.bbrc.2015.10.100. Epub 2015 Oct 23.

PMID:
26525852
16.

Structural basis for regulation of stability and activity in glyceraldehyde-3-phosphate dehydrogenases. Differential scanning calorimetry and molecular dynamics.

Makshakova ON, Semenyuk PI, Kuravsky ML, Ermakova EA, Zuev YF, Muronetz VI.

J Struct Biol. 2015 May;190(2):224-35. doi: 10.1016/j.jsb.2015.04.004. Epub 2015 Apr 11.

PMID:
25869789
17.

Effect of chaperonin encoded by gene 146 on thermal aggregation of lytic proteins of bacteriophage EL Pseudomonas aeruginosa.

Semenyuk PI, Orlov VN, Kurochkina LP.

Biochemistry (Mosc). 2015 Feb;80(2):172-9. doi: 10.1134/S0006297915020042.

18.

[application of the analytical transmission electron microscopy techniques for detection, identification and visualization of localization of nanoparticles of titanium and cerium oxides in mammalian cells].

Shebanova AS, Bogdanov AG, Ismagulova TT, Feofanov AV, Semenyuk PI, Muronets VI, Erokhina MV, Onishchenko GE, Kirpichnikov MP, Shaitan KV.

Biofizika. 2014 Mar-Apr;59(2):348-59. Russian.

PMID:
25702487
19.

GAPDH binders as potential drugs for the therapy of polyglutamine diseases: design of a new screening assay.

Lazarev VF, Benken KA, Semenyuk PI, Sarantseva SV, Bolshakova OI, Mikhaylova ER, Muronetz VI, Guzhova IV, Margulis BA.

FEBS Lett. 2015 Feb 27;589(5):581-7. doi: 10.1016/j.febslet.2015.01.018. Epub 2015 Jan 24.

20.

Sulfated and sulfonated polymers are able to solubilize efficiently the protein aggregates of different nature.

Semenyuk PI, Moiseeva EV, Stroylova YY, Lotti M, Izumrudov VA, Muronetz VI.

Arch Biochem Biophys. 2015 Feb 1;567:22-9. doi: 10.1016/j.abb.2014.12.021. Epub 2015 Jan 3.

PMID:
25562403
21.

Hydrophobic plant antioxidants. Preparation of nanoparticles and their application for prevention of neurodegenerative diseases. Review and experimental data.

Muronetz V, Asryants R, Semenyuk P, Schmalhausen E, Saso L.

Curr Top Med Chem. 2014;14(22):2520-8. Review.

PMID:
25478884
22.

Sperm-specific glyceraldehyde-3-phosphate dehydrogenase is stabilized by additional proline residues and an interdomain salt bridge.

Kuravsky M, Barinova K, Marakhovskaya A, Eldarov M, Semenyuk P, Muronetz V, Schmalhausen E.

Biochim Biophys Acta. 2014 Oct;1844(10):1820-6. doi: 10.1016/j.bbapap.2014.07.018. Epub 2014 Aug 1.

PMID:
25091199
23.

Creation of catalytically active particles from enzymes crosslinked with a natural bifunctional agent--homocysteine thiolactone.

Stroylova YY, Semenyuk PI, Asriyantz RA, Gaillard C, Haertlé T, Muronetz VI.

Biopolymers. 2014 Sep;101(9):975-84. doi: 10.1002/bip.22514.

PMID:
24912753
24.

Effect of disulfide crosslinking on thermal transitions and chaperone-like activity of human small heat shock protein HspB1.

Chalova AS, Sudnitsyna MV, Semenyuk PI, Orlov VN, Gusev NB.

Cell Stress Chaperones. 2014 Nov;19(6):963-72. doi: 10.1007/s12192-014-0520-9. Epub 2014 Jun 5.

25.

Complexes between anionic liposomes and spherical polycationic brushes. An assembly of assemblies.

Sybachin AV, Zaborova OV, Orlov VN, Semenyuk PI, Ballauff M, Kesselman E, Schmidt J, Talmon Y, Menger FM, Yaroslavov AA.

Langmuir. 2014 Mar 11;30(9):2441-7. doi: 10.1021/la4036248. Epub 2014 Feb 28.

PMID:
24533780
26.

Partially disordered structure in intravirus coat protein of potyvirus potato virus A.

Ksenofontov AL, Paalme V, Arutyunyan AM, Semenyuk PI, Fedorova NV, Rumvolt R, Baratova LA, Järvekülg L, Dobrov EN.

PLoS One. 2013 Jul 3;8(7):e67830. doi: 10.1371/journal.pone.0067830. Print 2013.

27.

Effect of poly(phosphate) anions on glyceraldehyde-3-phosphate dehydrogenase structure and thermal aggregation: comparison with influence of poly(sulfoanions).

Semenyuk PI, Muronetz VI, Haertlé T, Izumrudov VA.

Biochim Biophys Acta. 2013 Oct;1830(10):4800-5. doi: 10.1016/j.bbagen.2013.06.024. Epub 2013 Jun 26.

PMID:
23811344
28.

Structural lability of Barley stripe mosaic virus virions.

Makarov VV, Skurat EV, Semenyuk PI, Abashkin DA, Kalinina NO, Arutyunyan AM, Solovyev AG, Dobrov EN.

PLoS One. 2013 Apr 17;8(4):e60942. doi: 10.1371/journal.pone.0060942. Print 2013.

29.

Improving the dispersity of detonation nanodiamond: differential scanning calorimetry as a new method of controlling the aggregation state of nanodiamond powders.

Korobov MV, Volkov DS, Avramenko NV, Belyaeva LA, Semenyuk PI, Proskurnin MA.

Nanoscale. 2013 Feb 21;5(4):1529-36. doi: 10.1039/c2nr33512c.

PMID:
23314800
30.

Expression and functional characterization of the first bacteriophage-encoded chaperonin.

Kurochkina LP, Semenyuk PI, Orlov VN, Robben J, Sykilinda NN, Mesyanzhinov VV.

J Virol. 2012 Sep;86(18):10103-11. doi: 10.1128/JVI.00940-12. Epub 2012 Jul 11.

31.

Brønsted acids bounded to the mitochondrial membranes as a substrate for ATP synthase.

Eroshenko LV, Marakhovskaya AS, Vangeli IM, Semenyuk PI, Orlov VN, Yaguzhinsky LS.

Dokl Biochem Biophys. 2012 May-Jun;444:158-61. doi: 10.1134/S160767291203009X. Epub 2012 Jul 8. No abstract available.

PMID:
22773000
32.

Orthologues of a plant-specific At-4/1 gene in the genus Nicotiana and the structural properties of bacterially expressed 4/1 protein.

Makarova SS, Minina EA, Makarov VV, Semenyuk PI, Kopertekh L, Schiemann J, Serebryakova MV, Erokhina TN, Solovyev AG, Morozov SY.

Biochimie. 2011 Oct;93(10):1770-8. doi: 10.1016/j.biochi.2011.06.018. Epub 2011 Jun 21.

PMID:
21712068
33.

Novel inhibitors of glyceraldehyde-3-phosphate dehydrogenase: covalent modification of NAD-binding site by aromatic thiols.

Chernorizov KA, Elkina JL, Semenyuk PI, Svedas VK, Muronetz VI.

Biochemistry (Mosc). 2010 Dec;75(12):1444-9.

PMID:
21314614
34.

Effect of 2-hydroxypropyl-beta-cyclodextrin on thermal inactivation, denaturation and aggregation of glyceraldehyde-3-phosphate dehydrogenase from rabbit skeletal muscle.

Maloletkina OI, Markossian KA, Asryants RA, Semenyuk PI, Makeeva VF, Kurganov BI.

Int J Biol Macromol. 2010 Jun;46(5):487-92. doi: 10.1016/j.ijbiomac.2010.03.008. Epub 2010 Mar 23.

PMID:
20338194

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