Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 34

1.

DMSO induces drastic changes in human cellular processes and epigenetic landscape in vitro.

Verheijen M, Lienhard M, Schrooders Y, Clayton O, Nudischer R, Boerno S, Timmermann B, Selevsek N, Schlapbach R, Gmuender H, Gotta S, Geraedts J, Herwig R, Kleinjans J, Caiment F.

Sci Rep. 2019 Mar 15;9(1):4641. doi: 10.1038/s41598-019-40660-0.

2.

Targeted Proteomics Guided by Label-free Quantitative Proteome Analysis in Saliva Reveal Transition Signatures from Health to Periodontal Disease.

Bostanci N, Selevsek N, Wolski W, Grossmann J, Bao K, Wahlander A, Trachsel C, Schlapbach R, Öztürk VÖ, Afacan B, Emingil G, Belibasakis GN.

Mol Cell Proteomics. 2018 Jul;17(7):1392-1409. doi: 10.1074/mcp.RA118.000718. Epub 2018 Apr 2.

PMID:
29610270
3.

Subregion-Specific Proteomic Signature in the Hippocampus for Recognition Processes in Adult Mice.

von Ziegler LM, Selevsek N, Tweedie-Cullen RY, Kremer E, Mansuy IM.

Cell Rep. 2018 Mar 20;22(12):3362-3374. doi: 10.1016/j.celrep.2018.02.079.

4.

Ovine liver proteome: Assessing mechanisms of seasonal weight loss tolerance between Merino and Damara sheep.

Miller B, Selevsek N, Grossmann J, Kilminster T, Scanlon T, Daniels M, Nanni P, Milton J, Oldham C, Greeff J, Chapwanya A, Bergfelt D, de Almeida AM.

J Proteomics. 2019 Jan 16;191:180-190. doi: 10.1016/j.jprot.2018.02.018. Epub 2018 Feb 18.

PMID:
29466715
5.

Quantitative Profiling of N-linked Glycosylation Machinery in Yeast Saccharomyces cerevisiae.

Poljak K, Selevsek N, Ngwa E, Grossmann J, Losfeld ME, Aebi M.

Mol Cell Proteomics. 2018 Jan;17(1):18-30. doi: 10.1074/mcp.RA117.000096. Epub 2017 Oct 9.

6.

Functional proteomics outlines the complexity of breast cancer molecular subtypes.

Gámez-Pozo A, Trilla-Fuertes L, Berges-Soria J, Selevsek N, López-Vacas R, Díaz-Almirón M, Nanni P, Arevalillo JM, Navarro H, Grossmann J, Gayá Moreno F, Gómez Rioja R, Prado-Vázquez G, Zapater-Moros A, Main P, Feliú J, Martínez Del Prado P, Zamora P, Ciruelos E, Espinosa E, Fresno Vara JÁ.

Sci Rep. 2017 Aug 30;7(1):10100. doi: 10.1038/s41598-017-10493-w.

7.

A model-based assay design to reproduce in vivo patterns of acute drug-induced toxicity.

Kuepfer L, Clayton O, Thiel C, Cordes H, Nudischer R, Blank LM, Baier V, Heymans S, Caiment F, Roth A, Fluri DA, Kelm JM, Castell J, Selevsek N, Schlapbach R, Keun H, Hynes J, Sarkans U, Gmuender H, Herwig R, Niederer S, Schuchhardt J, Segall M, Kleinjans J.

Arch Toxicol. 2018 Jan;92(1):553-555. doi: 10.1007/s00204-017-2041-7. Epub 2017 Aug 29. No abstract available.

8.

Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry.

Collins BC, Hunter CL, Liu Y, Schilling B, Rosenberger G, Bader SL, Chan DW, Gibson BW, Gingras AC, Held JM, Hirayama-Kurogi M, Hou G, Krisp C, Larsen B, Lin L, Liu S, Molloy MP, Moritz RL, Ohtsuki S, Schlapbach R, Selevsek N, Thomas SN, Tzeng SC, Zhang H, Aebersold R.

Nat Commun. 2017 Aug 21;8(1):291. doi: 10.1038/s41467-017-00249-5.

9.

New Quantitative Mass Spectrometry Approaches Reveal Different ADP-ribosylation Phases Dependent On the Levels of Oxidative Stress.

Bilan V, Selevsek N, Kistemaker HAV, Abplanalp J, Feurer R, Filippov DV, Hottiger MO.

Mol Cell Proteomics. 2017 May;16(5):949-958. doi: 10.1074/mcp.O116.065623. Epub 2017 Mar 21.

10.

Targeted Proteomics for Multiplexed Verification of Markers of Colorectal Tumorigenesis.

Uzozie AC, Selevsek N, Wahlander A, Nanni P, Grossmann J, Weber A, Buffoli F, Marra G.

Mol Cell Proteomics. 2017 Mar;16(3):407-427. doi: 10.1074/mcp.M116.062273. Epub 2017 Jan 4.

11.

IDH-mutant glioma specific association of rs55705857 located at 8q24.21 involves MYC deregulation.

Oktay Y, Ülgen E, Can Ö, Akyerli CB, Yüksel Ş, Erdemgil Y, Durası IM, Henegariu OI, Nanni EP, Selevsek N, Grossmann J, Erson-Omay EZ, Bai H, Gupta M, Lee W, Turcan Ş, Özpınar A, Huse JT, Sav MA, Flanagan A, Günel M, Sezerman OU, Yakıcıer MC, Pamir MN, Özduman K.

Sci Rep. 2016 Jun 10;6:27569. doi: 10.1038/srep27569.

12.

Targeted proteomics coming of age - SRM, PRM and DIA performance evaluated from a core facility perspective.

Kockmann T, Trachsel C, Panse C, Wahlander A, Selevsek N, Grossmann J, Wolski WE, Schlapbach R.

Proteomics. 2016 Aug;16(15-16):2183-92. doi: 10.1002/pmic.201500502. Epub 2016 Jun 8.

PMID:
27130639
13.

Proteomic profiling of host-biofilm interactions in an oral infection model resembling the periodontal pocket.

Bao K, Belibasakis GN, Selevsek N, Grossmann J, Bostanci N.

Sci Rep. 2015 Nov 3;5:15999. doi: 10.1038/srep15999.

14.

Soil restoration with organic amendments: linking cellular functionality and ecosystem processes.

Bastida F, Selevsek N, Torres IF, Hernández T, García C.

Sci Rep. 2015 Oct 27;5:15550. doi: 10.1038/srep15550.

15.

Mass Spectrometric Proteome Analysis of Small Three-Dimensional Microtissues Allows for the Quantitative Description of Toxic Effects of Drugs.

Selevsek N, Schlapbach R.

Chimia (Aarau). 2015 Aug 19;69(7):494. doi: 10.2533/chimia.2015.494. No abstract available.

PMID:
28482985
16.

Protein degradation corrects for imbalanced subunit stoichiometry in OST complex assembly.

Mueller S, Wahlander A, Selevsek N, Otto C, Ngwa EM, Poljak K, Frey AD, Aebi M, Gauss R.

Mol Biol Cell. 2015 Jul 15;26(14):2596-608. doi: 10.1091/mbc.E15-03-0168. Epub 2015 May 20.

17.

Quantitative proteomics reveal distinct protein regulations caused by Aggregatibacter actinomycetemcomitans within subgingival biofilms.

Bao K, Bostanci N, Selevsek N, Thurnheer T, Belibasakis GN.

PLoS One. 2015 Mar 10;10(3):e0119222. doi: 10.1371/journal.pone.0119222. eCollection 2015.

18.

Reproducible and consistent quantification of the Saccharomyces cerevisiae proteome by SWATH-mass spectrometry.

Selevsek N, Chang CY, Gillet LC, Navarro P, Bernhardt OM, Reiter L, Cheng LY, Vitek O, Aebersold R.

Mol Cell Proteomics. 2015 Mar;14(3):739-49. doi: 10.1074/mcp.M113.035550. Epub 2015 Jan 5.

19.

Timescales and bottlenecks in miRNA-dependent gene regulation.

Hausser J, Syed AP, Selevsek N, van Nimwegen E, Jaskiewicz L, Aebersold R, Zavolan M.

Mol Syst Biol. 2013 Dec 3;9:711. doi: 10.1038/msb.2013.68.

20.

Systematic proteomic analysis identifies β-site amyloid precursor protein cleaving enzyme 2 and 1 (BACE2 and BACE1) substrates in pancreatic β-cells.

Stützer I, Selevsek N, Esterházy D, Schmidt A, Aebersold R, Stoffel M.

J Biol Chem. 2013 Apr 12;288(15):10536-47. doi: 10.1074/jbc.M112.444703. Epub 2013 Feb 19.

21.

Glucagon-induced acetylation of Foxa2 regulates hepatic lipid metabolism.

von Meyenn F, Porstmann T, Gasser E, Selevsek N, Schmidt A, Aebersold R, Stoffel M.

Cell Metab. 2013 Mar 5;17(3):436-47. doi: 10.1016/j.cmet.2013.01.014. Epub 2013 Feb 14.

22.

Reproducible quantification of cancer-associated proteins in body fluids using targeted proteomics.

Hüttenhain R, Soste M, Selevsek N, Röst H, Sethi A, Carapito C, Farrah T, Deutsch EW, Kusebauch U, Moritz RL, Niméus-Malmström E, Rinner O, Aebersold R.

Sci Transl Med. 2012 Jul 11;4(142):142ra94. doi: 10.1126/scitranslmed.3003989.

23.

PASSEL: the PeptideAtlas SRMexperiment library.

Farrah T, Deutsch EW, Kreisberg R, Sun Z, Campbell DS, Mendoza L, Kusebauch U, Brusniak MY, Hüttenhain R, Schiess R, Selevsek N, Aebersold R, Moritz RL.

Proteomics. 2012 Apr;12(8):1170-5. doi: 10.1002/pmic.201100515.

24.

Automated workflow for large-scale selected reaction monitoring experiments.

Malmström L, Malmström J, Selevsek N, Rosenberger G, Aebersold R.

J Proteome Res. 2012 Mar 2;11(3):1644-53. doi: 10.1021/pr200844d. Epub 2012 Feb 10.

PMID:
22283722
25.

Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis.

Gillet LC, Navarro P, Tate S, Röst H, Selevsek N, Reiter L, Bonner R, Aebersold R.

Mol Cell Proteomics. 2012 Jun;11(6):O111.016717. doi: 10.1074/mcp.O111.016717. Epub 2012 Jan 18.

26.

Mass spectrometry-based proteomics for systems biology.

Sabidó E, Selevsek N, Aebersold R.

Curr Opin Biotechnol. 2012 Aug;23(4):591-7. doi: 10.1016/j.copbio.2011.11.014. Epub 2011 Dec 12. Review.

PMID:
22169889
27.

Systematic quantification of peptides/proteins in urine using selected reaction monitoring.

Selevsek N, Matondo M, Sanchez Carbayo M, Aebersold R, Domon B.

Proteomics. 2011 Mar;11(6):1135-47. doi: 10.1002/pmic.201000599. Epub 2011 Feb 16.

PMID:
21360671
28.

Toward a standardized urine proteome analysis methodology.

Court M, Selevsek N, Matondo M, Allory Y, Garin J, Masselon CD, Domon B.

Proteomics. 2011 Mar;11(6):1160-71. doi: 10.1002/pmic.201000566. Epub 2011 Feb 16.

PMID:
21328537
29.

Broad antibiotic resistance profile of the subclass B3 metallo-β-lactamase GOB-1, a di-zinc enzyme.

Horsfall LE, Izougarhane Y, Lassaux P, Selevsek N, Liénard BM, Poirel L, Kupper MB, Hoffmann KM, Frère JM, Galleni M, Bebrone C.

FEBS J. 2011 Apr;278(8):1252-63. doi: 10.1111/j.1742-4658.2011.08046.x. Epub 2011 Mar 4.

30.

Zinc ion-induced domain organization in metallo-beta-lactamases: a flexible "zinc arm" for rapid metal ion transfer?

Selevsek N, Rival S, Tholey A, Heinzle E, Heinz U, Hemmingsen L, Adolph HW.

J Biol Chem. 2009 Jun 12;284(24):16419-31. doi: 10.1074/jbc.M109.001305. Epub 2009 Apr 24.

31.

Combined mass spectrometry and dynamic chemistry approach to identify metalloenzyme inhibitors.

Liénard BM, Selevsek N, Oldham NJ, Schofield CJ.

ChemMedChem. 2007 Feb;2(2):175-9. No abstract available.

PMID:
17206734
32.

Studies on ternary metallo-β lactamase-inhibitor complexes using electrospray ionization mass spectrometry.

Selevsek N, Tholey A, Heinzle E, Liénard BMR, Oldham NJ, Schofield CJ, Heinz U, Adolph HW, Frère JM.

J Am Soc Mass Spectrom. 2006 Jul;17(7):1000-1004. doi: 10.1016/j.jasms.2006.03.010. Epub 2006 Jul 1.

PMID:
29500809
33.

Studies on ternary metallo-beta lactamase-inhibitor complexes using electrospray ionization mass spectrometry.

Selevsek N, Tholey A, Heinzle E, Liénard BM, Oldham NJ, Schofield CJ, Heinz U, Adolph HW, Frère JM.

J Am Soc Mass Spectrom. 2006 Jul;17(7):1000-4. Epub 2006 May 19.

34.

Supplemental Content

Loading ...
Support Center