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Items: 1 to 50 of 550

1.

Overview of the "1SBA: integrative approaches towards understanding of gene expression" session at the 57th BSJ meeting.

Mori T, Sekine SI.

Biophys Rev. 2020 Feb 13. doi: 10.1007/s12551-020-00644-1. [Epub ahead of print] No abstract available.

2.

Clinicopathological and molecular correlations in traditional serrated adenoma.

Sekine S, Yamashita S, Yamada M, Hashimoto T, Ogawa R, Yoshida H, Taniguchi H, Kojima M, Ushijima T, Saito Y.

J Gastroenterol. 2020 Feb 12. doi: 10.1007/s00535-020-01673-z. [Epub ahead of print]

PMID:
32052185
3.

Successful energy shift from glycolysis to mitochondrial oxidative phosphorylation in freshly isolated hepatocytes from humanized mice liver.

Ikeyama Y, Sato T, Takemura A, Sekine S, Ito K.

Toxicol In Vitro. 2020 Jan 25;65:104785. doi: 10.1016/j.tiv.2020.104785. [Epub ahead of print]

PMID:
31991145
4.

Vanadium doped polyoxometalate: induced active sites and increased hydrogen adsorption.

Aspera SM, Arevalo RL, Nakanishi H, Kasai H, Sekine S, Kawai H.

J Phys Condens Matter. 2020 Jan 16;32(19):195001. doi: 10.1088/1361-648X/ab6cc3. [Epub ahead of print]

PMID:
31945756
5.

Big Data in the Assessment of Pediatric Medication Safety.

McMahon AW, Cooper WO, Brown JS, Carleton B, Doshi-Velez F, Kohane I, Goldman JL, Hoffman MA, Kamaleswaran R, Sakiyama M, Sekine S, Sturkenboom MCJM, Turner MA, Califf RM.

Pediatrics. 2020 Feb;145(2). pii: e20190562. doi: 10.1542/peds.2019-0562. Epub 2020 Jan 14.

PMID:
31937606
6.

Design and fabrication of portable continuous flow PCR microfluidic chip for DNA replication.

Li Z, Li Y, Sekine S, Xi H, Amano A, Zhang D, Yamaguchi Y.

Biomed Microdevices. 2019 Dec 10;22(1):5. doi: 10.1007/s10544-019-0457-y.

PMID:
31823015
7.

Endoscopic Ultrasonography Miniature Probe Performance for Depth Diagnosis of Early Gastric Cancer with Suspected Submucosal Invasion.

Takamaru H, Yoshinaga S, Takisawa H, Oda I, Katai H, Sekine S, Taniguchi K, Saito Y.

Gut Liver. 2019 Dec 11. doi: 10.5009/gnl19243. [Epub ahead of print]

8.

Functional modulation of liver mitochondria in lipopolysaccharide/drug co-treated rat liver injury model.

Arakawa K, Ikeyama Y, Sato T, Segawa M, Sekine S, Ito K.

J Toxicol Sci. 2019;44(12):833-843. doi: 10.2131/jts.44.833.

9.

Discovery of a small molecule inhibitor targeting dengue virus NS5 RNA-dependent RNA polymerase.

Shimizu H, Saito A, Mikuni J, Nakayama EE, Koyama H, Honma T, Shirouzu M, Sekine SI, Shioda T.

PLoS Negl Trop Dis. 2019 Nov 18;13(11):e0007894. doi: 10.1371/journal.pntd.0007894. eCollection 2019 Nov.

10.
11.

Optical biopsy in real time by endocytoscopy: a case of juvenile polyp.

Kagemoto K, Saito Y, Mizuguchi Y, Sakamoto T, Taniguchi H, Sekine S, Takayama T.

Endoscopy. 2019 Nov 7. doi: 10.1055/a-1028-6973. [Epub ahead of print] No abstract available.

PMID:
31698472
12.

Infective endocarditis caused by Capnocytophaga canimorsus; a case report.

Sakai J, Imanaka K, Kodana M, Ohgane K, Sekine S, Yamamoto K, Nishida Y, Kawamura T, Matsuoka T, Maesaki S, Oka H, Ohno H.

BMC Infect Dis. 2019 Nov 4;19(1):927. doi: 10.1186/s12879-019-4492-3.

13.

Muir-Torre syndrome: sebaceous carcinoma concurrent with colon cancer in a kidney transplant recipient; a case report.

Tomonari M, Shimada M, Nakada Y, Yamamoto I, Itoh M, Koike Y, Kobayashi A, Miki J, Yamada H, Kimura T, Saito S, Sugano K, Sekine S, Yamamoto H, Asahina A, Yokoo T.

BMC Nephrol. 2019 Oct 29;20(1):394. doi: 10.1186/s12882-019-1592-7.

14.

Chromosome Engineering of Human Colon-Derived Organoids to Develop a Model of Traditional Serrated Adenoma.

Kawasaki K, Fujii M, Sugimoto S, Ishikawa K, Matano M, Ohta Y, Toshimitsu K, Takahashi S, Hosoe N, Sekine S, Kanai T, Sato T.

Gastroenterology. 2020 Feb;158(3):638-651.e8. doi: 10.1053/j.gastro.2019.10.009. Epub 2019 Oct 14.

PMID:
31622618
15.

Identification of serum microRNAs predicting the response of esophageal squamous-cell carcinoma to nivolumab.

Sudo K, Kato K, Matsuzaki J, Takizawa S, Aoki Y, Shoji H, Iwasa S, Honma Y, Takashima A, Sakamoto H, Naka T, Sekine S, Boku N, Ochiya T.

Jpn J Clin Oncol. 2020 Feb 17;50(2):114-121. doi: 10.1093/jjco/hyz146.

PMID:
31612917
16.

Impact of endoscopic submucosal dissection of an anal squamous intraepithelial lesion with indistinct border.

Kasuga K, Saito Y, Wu SYS, Takamaru H, Sakamoto T, Sekine S, Uraoka T.

Endoscopy. 2020 Feb;52(2):E75-E77. doi: 10.1055/a-0977-2446. Epub 2019 Sep 17. No abstract available.

PMID:
31529437
17.

PINK1 import regulation at a crossroad of mitochondrial fate.

Sekine S.

J Biochem. 2019 Sep 4. pii: mvz069. doi: 10.1093/jb/mvz069. [Epub ahead of print]

PMID:
31504668
18.

Diagnostic yield of the Japan NBI Expert Team (JNET) classification for endoscopic diagnosis of superficial colorectal neoplasms in a large-scale clinical practice database.

Kobayashi S, Yamada M, Takamaru H, Sakamoto T, Matsuda T, Sekine S, Igarashi Y, Saito Y.

United European Gastroenterol J. 2019 Aug;7(7):914-923. doi: 10.1177/2050640619845987. Epub 2019 Apr 26.

19.

Evolving Vision of Regulatory Science in the Global Medical Community.

Kondo T, Hayashi Y, Sato J, Sekine S, Hoshino T, Sato D.

Clin Pharmacol Ther. 2020 Jan;107(1):136-139. doi: 10.1002/cpt.1604. Epub 2019 Sep 13. Review.

PMID:
31376148
20.

In vitro bile acid-dependent hepatocyte toxicity assay system using human induced pluripotent stem cell-derived hepatocytes: Current status and disadvantages to overcome.

Sakai Y, Iwao T, Susukida T, Nukaga T, Takemura A, Sekine S, Ito K, Matsunaga T.

Drug Metab Pharmacokinet. 2019 Aug;34(4):264-271. doi: 10.1016/j.dmpk.2019.04.004. Epub 2019 May 10.

PMID:
31285099
21.

All-in-one microfluidic device for on-site diagnosis of pathogens based on an integrated continuous flow PCR and electrophoresis biochip.

Li Z, Ju R, Sekine S, Zhang D, Zhuang S, Yamaguchi Y.

Lab Chip. 2019 Aug 21;19(16):2663-2668. doi: 10.1039/c9lc00305c. Epub 2019 Jul 5.

PMID:
31273367
22.

Identification of a novel PRR15L-RSPO2 fusion transcript in a sigmoid colon cancer derived from superficially serrated adenoma.

Mizuguchi Y, Sakamoto T, Hashimoto T, Tsukamoto S, Iwasa S, Saito Y, Sekine S.

Virchows Arch. 2019 Nov;475(5):659-663. doi: 10.1007/s00428-019-02604-x. Epub 2019 Jun 17.

PMID:
31209633
23.

Establishment of Novel Gastric Cancer Patient-Derived Xenografts and Cell Lines: Pathological Comparison between Primary Tumor, Patient-Derived, and Cell-Line Derived Xenografts.

Kuwata T, Yanagihara K, Iino Y, Komatsu T, Ochiai A, Sekine S, Taniguchi H, Katai H, Kinoshita T, Ohtsu A.

Cells. 2019 Jun 14;8(6). pii: E585. doi: 10.3390/cells8060585.

24.

A case of mixed-type early gastric cancer with recurrence following curative endoscopic submucosal dissection for expanded indication.

Kobayashi S, Nonaka S, Oda I, Abe S, Suzuki H, Yoshinaga S, Taniguchi H, Sekine S, Igarashi Y, Saito Y.

Endosc Int Open. 2019 Jun;7(6):E841-E845. doi: 10.1055/a-0900-3835. Epub 2019 Jun 12.

25.

Recurrent YAP1-MAML2 and YAP1-NUTM1 fusions in poroma and porocarcinoma.

Sekine S, Kiyono T, Ryo E, Ogawa R, Wakai S, Ichikawa H, Suzuki K, Arai S, Tsuta K, Ishida M, Sasajima Y, Goshima N, Yamazaki N, Mori T.

J Clin Invest. 2019 May 30;130:3827-3832. doi: 10.1172/JCI126185.

26.

Inhibition of biliary network reconstruction by benzbromarone delays recovery from pre-existing liver injury.

Takemura A, Gong S, Sekine S, Ito K.

Toxicology. 2019 Jul 1;423:32-41. doi: 10.1016/j.tox.2019.05.004. Epub 2019 May 15.

PMID:
31102694
27.

A Multicenter Study of the Prognostic Value of Desmoplastic Reaction Categorization in Stage II Colorectal Cancer.

Ueno H, Kanemitsu Y, Sekine S, Ishiguro M, Ito E, Hashiguchi Y, Kondo F, Shimazaki H, Kajiwara Y, Okamoto K, Mochizuki S, Tsujimoto H, Shinto E.

Am J Surg Pathol. 2019 Aug;43(8):1015-1022. doi: 10.1097/PAS.0000000000001272.

PMID:
31094924
28.

Cancer cell niche factors secreted from cancer-associated fibroblast by loss of H3K27me3.

Maeda M, Takeshima H, Iida N, Hattori N, Yamashita S, Moro H, Yasukawa Y, Nishiyama K, Hashimoto T, Sekine S, Ishii G, Ochiai A, Fukagawa T, Katai H, Sakai Y, Ushijima T.

Gut. 2020 Feb;69(2):243-251. doi: 10.1136/gutjnl-2018-317645. Epub 2019 May 13.

PMID:
31085554
29.

Nanopore Formation in the Cuticle of an Insect Olfactory Sensillum.

Ando T, Sekine S, Inagaki S, Misaki K, Badel L, Moriya H, Sami MM, Itakura Y, Chihara T, Kazama H, Yonemura S, Hayashi S.

Curr Biol. 2019 May 6;29(9):1512-1520.e6. doi: 10.1016/j.cub.2019.03.043. Epub 2019 Apr 18.

PMID:
31006566
30.

Functional evaluation of PDGFB-variants in idiopathic basal ganglia calcification, using patient-derived iPS cells.

Sekine SI, Kaneko M, Tanaka M, Ninomiya Y, Kurita H, Inden M, Yamada M, Hayashi Y, Inuzuka T, Mitsui J, Ishiura H, Iwata A, Fujigasaki H, Tamaki H, Tamaki R, Kito S, Taguchi Y, Tanaka K, Atsuta N, Sobue G, Kondo T, Inoue H, Tsuji S, Hozumi I.

Sci Rep. 2019 Apr 5;9(1):5698. doi: 10.1038/s41598-019-42115-y.

31.

EIF3E-RSPO2 and PIEZO1-RSPO2 fusions in colorectal traditional serrated adenoma.

Hashimoto T, Ogawa R, Yoshida H, Taniguchi H, Kojima M, Saito Y, Sekine S.

Histopathology. 2019 Aug;75(2):266-273. doi: 10.1111/his.13867. Epub 2019 Jun 20.

PMID:
30916365
32.

Risk of Lymph Node Metastasis in Patients with the Superficial Spreading Type of Esophageal Squamous Cell Carcinoma.

Yachida T, Oda I, Abe S, Sekiguchi M, Nonaka S, Suzuki H, Yoshinaga S, Taniguchi H, Sekine S, Masugata H, Masaki T, Daiko H, Saito Y.

Digestion. 2019 Mar 25:1-6. doi: 10.1159/000499017. [Epub ahead of print]

PMID:
30909271
33.

Feasibility and utility of a panel testing for 114 cancer-associated genes in a clinical setting: A hospital-based study.

Sunami K, Ichikawa H, Kubo T, Kato M, Fujiwara Y, Shimomura A, Koyama T, Kakishima H, Kitami M, Matsushita H, Furukawa E, Narushima D, Nagai M, Taniguchi H, Motoi N, Sekine S, Maeshima A, Mori T, Watanabe R, Yoshida M, Yoshida A, Yoshida H, Satomi K, Sukeda A, Hashimoto T, Shimizu T, Iwasa S, Yonemori K, Kato K, Morizane C, Ogawa C, Tanabe N, Sugano K, Hiraoka N, Tamura K, Yoshida T, Fujiwara Y, Ochiai A, Yamamoto N, Kohno T.

Cancer Sci. 2019 Apr;110(4):1480-1490. doi: 10.1111/cas.13969. Epub 2019 Apr 2.

34.

Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.

Ehara H, Kujirai T, Fujino Y, Shirouzu M, Kurumizaka H, Sekine SI.

Science. 2019 Feb 15;363(6428):744-747. doi: 10.1126/science.aav8912. Epub 2019 Feb 7.

PMID:
30733384
35.

Reciprocal Roles of Tom7 and OMA1 during Mitochondrial Import and Activation of PINK1.

Sekine S, Wang C, Sideris DP, Bunker E, Zhang Z, Youle RJ.

Mol Cell. 2019 Mar 7;73(5):1028-1043.e5. doi: 10.1016/j.molcel.2019.01.002. Epub 2019 Feb 4.

PMID:
30733118
36.

SLC20A2 variants cause dysfunctional phosphate transport activity in endothelial cells induced from Idiopathic Basal Ganglia Calcification patients-derived iPSCs.

Sekine SI, Nishii K, Masaka T, Kurita H, Inden M, Hozumi I.

Biochem Biophys Res Commun. 2019 Mar 5;510(2):303-308. doi: 10.1016/j.bbrc.2019.01.096. Epub 2019 Jan 28.

PMID:
30704756
37.

Frequent mutations of genes encoding vacuolar H+ -ATPase components in granular cell tumors.

Sekimizu M, Yoshida A, Mitani S, Asano N, Hirata M, Kubo T, Yamazaki F, Sakamoto H, Kato M, Makise N, Mori T, Yamazaki N, Sekine S, Oda I, Watanabe SI, Hiraga H, Yonemoto T, Kawamoto T, Naka N, Funauchi Y, Nishida Y, Honoki K, Kawano H, Tsuchiya H, Kunisada T, Matsuda K, Inagaki K, Kawai A, Ichikawa H.

Genes Chromosomes Cancer. 2019 Jun;58(6):373-380. doi: 10.1002/gcc.22727. Epub 2019 Jan 21.

PMID:
30597645
38.

Author Correction: The selective tRNA aminoacylation mechanism based on a single G•U pair.

Naganuma M, Sekine SI, Chong YE, Guo M, Yang XL, Gamper H, Hou YM, Schimmel P, Yokoyama S.

Nature. 2018 Dec;564(7736):E37. doi: 10.1038/s41586-018-0760-4.

39.

RHOA mutations and CLDN18-ARHGAP fusions in intestinal-type adenocarcinoma with anastomosing glands of the stomach.

Hashimoto T, Ogawa R, Tang TY, Yoshida H, Taniguchi H, Katai H, Oda I, Sekine S.

Mod Pathol. 2019 Apr;32(4):568-575. doi: 10.1038/s41379-018-0181-9. Epub 2018 Nov 13.

PMID:
30425335
40.

Mediastinoscopic salvage esophagectomy for recurrent esophageal squamous cell carcinoma after definitive chemoradiotherapy in a previously pneumonectomized patient.

Okumura T, Seto Y, Aikou S, Moriyama M, Sekine S, Hashimoto I, Shibuya K, Hojo S, Yoshioka I, Nagata T, Fujii T.

Asian J Endosc Surg. 2019 Oct;12(4):452-456. doi: 10.1111/ases.12658. Epub 2018 Nov 8.

PMID:
30411514
41.

Synthesis of novel benzbromarone derivatives designed to avoid metabolic activation.

Ohe T, Umezawa R, Kitagawara Y, Yasuda D, Takahashi K, Nakamura S, Abe A, Sekine S, Ito K, Okunushi K, Morio H, Furihata T, Anzai N, Mashino T.

Bioorg Med Chem Lett. 2018 Dec 15;28(23-24):3708-3711. doi: 10.1016/j.bmcl.2018.10.023. Epub 2018 Oct 15.

PMID:
30389287
42.

Structural basis of the nucleosome transition during RNA polymerase II passage.

Kujirai T, Ehara H, Fujino Y, Shirouzu M, Sekine SI, Kurumizaka H.

Science. 2018 Nov 2;362(6414):595-598. doi: 10.1126/science.aau9904. Epub 2018 Oct 4.

PMID:
30287617
43.

Acquisition of WNT Pathway Gene Alterations Coincides With the Transition From Precursor Polyps to Traditional Serrated Adenomas.

Hashimoto T, Ogawa R, Yoshida H, Taniguchi H, Kojima M, Saito Y, Sekine S.

Am J Surg Pathol. 2019 Jan;43(1):132-139. doi: 10.1097/PAS.0000000000001149.

PMID:
30179900
44.

Divergent Routes toward Wnt and R-spondin Niche Independency during Human Gastric Carcinogenesis.

Nanki K, Toshimitsu K, Takano A, Fujii M, Shimokawa M, Ohta Y, Matano M, Seino T, Nishikori S, Ishikawa K, Kawasaki K, Togasaki K, Takahashi S, Sukawa Y, Ishida H, Sugimoto S, Kawakubo H, Kim J, Kitagawa Y, Sekine S, Koo BK, Kanai T, Sato T.

Cell. 2018 Aug 9;174(4):856-869.e17. doi: 10.1016/j.cell.2018.07.027.

45.

Distinct ways of G:U recognition by conserved tRNA binding motifs.

Chong YE, Guo M, Yang XL, Kuhle B, Naganuma M, Sekine SI, Yokoyama S, Schimmel P.

Proc Natl Acad Sci U S A. 2018 Jul 17;115(29):7527-7532. doi: 10.1073/pnas.1807109115. Epub 2018 Jul 2.

46.

The stress response gene ATF3 is a direct target of the Wnt/β-catenin pathway and inhibits the invasion and migration of HCT116 human colorectal cancer cells.

Inoue M, Uchida Y, Edagawa M, Hirata M, Mitamura J, Miyamoto D, Taketani K, Sekine S, Kawauchi J, Kitajima S.

PLoS One. 2018 Jul 2;13(7):e0194160. doi: 10.1371/journal.pone.0194160. eCollection 2018.

47.

Reappraisal of the genetic heterogeneity of sessile serrated adenoma/polyp.

Cho H, Hashimoto T, Yoshida H, Taniguchi H, Ogawa R, Mori T, Hiraoka N, Saito Y, Sekine S.

Histopathology. 2018 Oct;73(4):672-680. doi: 10.1111/his.13688. Epub 2018 Aug 2.

PMID:
29920740
48.

Slow luminescence kinetics of semi-synthetic aequorin: expression, purification and structure determination of cf3-aequorin.

Inouye S, Tomabechi Y, Hosoya T, Sekine SI, Shirouzu M.

J Biochem. 2018 Sep 1;164(3):247-255. doi: 10.1093/jb/mvy049.

PMID:
29796619
49.

Japanese Society for Cancer of the Colon and Rectum (JSCCR) Guidelines 2016 for the Clinical Practice of Hereditary Colorectal Cancer (Translated Version).

Ishida H, Yamaguchi T, Tanakaya K, Akagi K, Inoue Y, Kumamoto K, Shimodaira H, Sekine S, Tanaka T, Chino A, Tomita N, Nakajima T, Hasegawa H, Hinoi T, Hirasawa A, Miyakura Y, Murakami Y, Muro K, Ajioka Y, Hashiguchi Y, Ito Y, Saito Y, Hamaguchi T, Ishiguro M, Ishihara S, Kanemitsu Y, Kawano H, Kinugasa Y, Kokudo N, Murofushi K, Nakajima T, Oka S, Sakai Y, Tsuji A, Uehara K, Ueno H, Yamazaki K, Yoshida M, Yoshino T, Boku N, Fujimori T, Itabashi M, Koinuma N, Morita T, Nishimura G, Sakata Y, Shimada Y, Takahashi K, Tanaka S, Tsuruta O, Yamaguchi T, Sugihara K, Watanabe T; Japanese Society for Cancer of the Colon and Rectum.

J Anus Rectum Colon. 2018 May 25;2(Suppl I):S1-S51. doi: 10.23922/jarc.2017-028. eCollection 2018. Review.

50.

Superficially serrated adenoma: a proposal for a novel subtype of colorectal serrated lesion.

Hashimoto T, Tanaka Y, Ogawa R, Mori T, Yoshida H, Taniguchi H, Hiraoka N, Kojima M, Oono Y, Saito Y, Sekine S.

Mod Pathol. 2018 Oct;31(10):1588-1598. doi: 10.1038/s41379-018-0069-8. Epub 2018 May 22.

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