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Glider soaring via reinforcement learning in the field.

Reddy G, Wong-Ng J, Celani A, Sejnowski TJ, Vergassola M.

Nature. 2018 Sep 19. doi: 10.1038/s41586-018-0533-0. [Epub ahead of print]


Pre-post synaptic alignment through neuroligin-1 tunes synaptic transmission efficiency.

Haas KT, Compans B, Letellier M, Bartol TM, Grillo-Bosch D, Sejnowski TJ, Sainlos M, Choquet D, Thoumine O, Hosy E.

Elife. 2018 Jul 25;7. pii: e31755. doi: 10.7554/eLife.31755.


Thalamocortical and intracortical laminar connectivity determines sleep spindle properties.

Krishnan GP, Rosen BQ, Chen JY, Muller L, Sejnowski TJ, Cash SS, Halgren E, Bazhenov M.

PLoS Comput Biol. 2018 Jun 27;14(6):e1006171. doi: 10.1371/journal.pcbi.1006171. eCollection 2018 Jun.


Structured networks support sparse traveling waves in rodent somatosensory cortex.

Moldakarimov S, Bazhenov M, Feldman DE, Sejnowski TJ.

Proc Natl Acad Sci U S A. 2018 May 15;115(20):5277-5282. doi: 10.1073/pnas.1710202115. Epub 2018 Apr 30.


Efficient models of polymerization applied to FtsZ ring assembly in Escherichia coli.

Ruiz-Martínez Á, Bartol TM, Sejnowski TJ, Tartakovsky DM.

Proc Natl Acad Sci U S A. 2018 May 8;115(19):4933-4938. doi: 10.1073/pnas.1719391115. Epub 2018 Apr 23.


Cortical travelling waves: mechanisms and computational principles.

Muller L, Chavane F, Reynolds J, Sejnowski TJ.

Nat Rev Neurosci. 2018 May;19(5):255-268. doi: 10.1038/nrn.2018.20. Epub 2018 Mar 22. Review.


Ketamine independently modulated power and phase-coupling of theta oscillations in Sp4 hypomorphic mice.

Wang X, Pinto-Duarte A, Behrens MM, Zhou X, Sejnowski TJ.

PLoS One. 2018 Mar 7;13(3):e0193446. doi: 10.1371/journal.pone.0193446. eCollection 2018.


Long-term potentiation expands information content of hippocampal dentate gyrus synapses.

Bromer C, Bartol TM, Bowden JB, Hubbard DD, Hanka DC, Gonzalez PV, Kuwajima M, Mendenhall JM, Parker PH, Abraham WC, Sejnowski TJ, Harris KM.

Proc Natl Acad Sci U S A. 2018 Mar 6;115(10):E2410-E2418. doi: 10.1073/pnas.1716189115. Epub 2018 Feb 20.


Heterogeneities in Axonal Structure and Transporter Distribution Lower Dopamine Reuptake Efficiency.

Kaya C, Cheng MH, Block ER, Bartol TM, Sejnowski TJ, Sorkin A, Faeder JR, Bahar I.

eNeuro. 2018 Feb 5;5(1). pii: ENEURO.0298-17.2017. doi: 10.1523/ENEURO.0298-17.2017. eCollection 2018 Jan-Feb.


Brain-state dependent astrocytic Ca2+ signals are coupled to both positive and negative BOLD-fMRI signals.

Wang M, He Y, Sejnowski TJ, Yu X.

Proc Natl Acad Sci U S A. 2018 Feb 13;115(7):E1647-E1656. doi: 10.1073/pnas.1711692115. Epub 2018 Jan 30.


Beyond excitation/inhibition imbalance in multidimensional models of neural circuit changes in brain disorders.

O'Donnell C, Gonçalves JT, Portera-Cailliau C, Sejnowski TJ.

Elife. 2017 Oct 11;6. pii: e26724. doi: 10.7554/eLife.26724.


Interstitial solute transport in 3D reconstructed neuropil occurs by diffusion rather than bulk flow.

Holter KE, Kehlet B, Devor A, Sejnowski TJ, Dale AM, Omholt SW, Ottersen OP, Nagelhus EA, Mardal KA, Pettersen KH.

Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):9894-9899. doi: 10.1073/pnas.1706942114. Epub 2017 Aug 28.


Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex.

Luo C, Keown CL, Kurihara L, Zhou J, He Y, Li J, Castanon R, Lucero J, Nery JR, Sandoval JP, Bui B, Sejnowski TJ, Harkins TT, Mukamel EA, Behrens MM, Ecker JR.

Science. 2017 Aug 11;357(6351):600-604. doi: 10.1126/science.aan3351.


Delay Differential Analysis of Seizures in Multichannel Electrocorticography Data.

Lainscsek C, Weyhenmeyer J, Cash SS, Sejnowski TJ.

Neural Comput. 2017 Dec;29(12):3181-3218. doi: 10.1162/neco_a_01009. Epub 2017 Aug 4.


Differential Covariance: A New Class of Methods to Estimate Sparse Connectivity from Neural Recordings.

Lin TW, Das A, Krishnan GP, Bazhenov M, Sejnowski TJ.

Neural Comput. 2017 Oct;29(10):2581-2632. doi: 10.1162/neco_a_01008. Epub 2017 Aug 4.


Decision-making neural circuits mediating social behaviors : An attractor network model.

Hurtado-López J, Ramirez-Moreno DF, Sejnowski TJ.

J Comput Neurosci. 2017 Oct;43(2):127-142. doi: 10.1007/s10827-017-0654-8. Epub 2017 Jun 29.



Sejnowski TJ.

In: Kennedy H, Van Essen DC, Christen Y, editors. Micro-, Meso- and Macro-Connectomics of the Brain [Internet]. Cham (CH): Springer; 2016.
2016 Mar 11.


Analytical Derivation of Nonlinear Spectral Effects and 1/f Scaling Artifact in Signal Processing of Real-World Data.

Lainscsek C, Muller LE, Sampson AL, Sejnowski TJ.

Neural Comput. 2017 Jul;29(7):2004-2020. doi: 10.1162/NECO_a_00979. Epub 2017 May 31.


Cortical gamma band synchronization through somatostatin interneurons.

Veit J, Hakim R, Jadi MP, Sejnowski TJ, Adesnik H.

Nat Neurosci. 2017 Jul;20(7):951-959. doi: 10.1038/nn.4562. Epub 2017 May 8.


A Dynamic Circuit Hypothesis for the Pathogenesis of Blepharospasm.

Peterson DA, Sejnowski TJ.

Front Comput Neurosci. 2017 Mar 7;11:11. doi: 10.3389/fncom.2017.00011. eCollection 2017.


Interpretation of the Precision Matrix and Its Application in Estimating Sparse Brain Connectivity during Sleep Spindles from Human Electrocorticography Recordings.

Das A, Sampson AL, Lainscsek C, Muller L, Lin W, Doyle JC, Cash SS, Halgren E, Sejnowski TJ.

Neural Comput. 2017 Mar;29(3):603-642. doi: 10.1162/NECO_a_00936. Epub 2017 Jan 17.


Dendritic trafficking faces physiologically critical speed-precision tradeoffs.

Williams AH, O'Donnell C, Sejnowski TJ, O'Leary T.

Elife. 2016 Dec 30;5. pii: e20556. doi: 10.7554/eLife.20556.


The Population Tracking Model: A Simple, Scalable Statistical Model for Neural Population Data.

O'Donnell C, Gonçalves JT, Whiteley N, Portera-Cailliau C, Sejnowski TJ.

Neural Comput. 2017 Jan;29(1):50-93. doi: 10.1162/NECO_a_00910. Epub 2016 Nov 21.


Rotating waves during human sleep spindles organize global patterns of activity that repeat precisely through the night.

Muller L, Piantoni G, Koller D, Cash SS, Halgren E, Sejnowski TJ.

Elife. 2016 Nov 15;5. pii: e17267. doi: 10.7554/eLife.17267.


Objective, computerized video-based rating of blepharospasm severity.

Peterson DA, Littlewort GC, Bartlett MS, Macerollo A, Perlmutter JS, Jinnah HA, Hallett M, Sejnowski TJ.

Neurology. 2016 Nov 15;87(20):2146-2153. Epub 2016 Oct 21.


Worldwide initiatives to advance brain research.

Grillner S, Ip N, Koch C, Koroshetz W, Okano H, Polachek M, Poo MM, Sejnowski TJ.

Nat Neurosci. 2016 Aug 26;19(9):1118-22. doi: 10.1038/nn.4371. Review. No abstract available.


A path toward understanding neurodegeneration.

Kosik KS, Sejnowski TJ, Raichle ME, Ciechanover A, Baltimore D.

Science. 2016 Aug 26;353(6302):872-3. doi: 10.1126/science.aai7622. No abstract available.


Learning to soar in turbulent environments.

Reddy G, Celani A, Sejnowski TJ, Vergassola M.

Proc Natl Acad Sci U S A. 2016 Aug 16;113(33):E4877-84. doi: 10.1073/pnas.1606075113. Epub 2016 Aug 1.


Conservation law for self-paced movements.

Huh D, Sejnowski TJ.

Proc Natl Acad Sci U S A. 2016 Aug 2;113(31):8831-6. doi: 10.1073/pnas.1608724113. Epub 2016 Jul 14. Erratum in: Proc Natl Acad Sci U S A. 2016 Sep 13;113(37):E5539.


Diverse Representations of Olfactory Information in Centrifugal Feedback Projections.

Padmanabhan K, Osakada F, Tarabrina A, Kizer E, Callaway EM, Gage FH, Sejnowski TJ.

J Neurosci. 2016 Jul 13;36(28):7535-45. doi: 10.1523/JNEUROSCI.3358-15.2016.


Efficient Multiscale Models of Polymer Assembly.

Ruiz-Martinez A, Bartol TM, Sejnowski TJ, Tartakovsky DM.

Biophys J. 2016 Jul 12;111(1):185-96. doi: 10.1016/j.bpj.2016.05.022.



Sejnowski TJ.

Daedalus. 2015 Winter;144(1):123-132.


Time-coded neurotransmitter release at excitatory and inhibitory synapses.

Rodrigues S, Desroches M, Krupa M, Cortes JM, Sejnowski TJ, Ali AB.

Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):E1108-15. doi: 10.1073/pnas.1525591113. Epub 2016 Feb 8.


Street View of the Cognitive Map.

O'Donnell C, Sejnowski TJ.

Cell. 2016 Jan 14;164(1-2):13-15. doi: 10.1016/j.cell.2015.12.051.


Nanoconnectomic upper bound on the variability of synaptic plasticity.

Bartol TM, Bromer C, Kinney J, Chirillo MA, Bourne JN, Harris KM, Sejnowski TJ.

Elife. 2015 Nov 30;4:e10778. doi: 10.7554/eLife.10778.


Corrigendum: Human body epigenome maps reveal noncanonical DNA methylation variation.

Schultz MD, He Y, Whitaker JW, Hariharan M, Mukamel EA, Leung D, Rajagopal N, Nery JR, Urich MA, Chen H, Lin S, Lin Y, Jung I, Schmitt AD, Selvaraj S, Ren B, Sejnowski TJ, Wang W, Ecker JR.

Nature. 2016 Feb 11;530(7589):242. doi: 10.1038/nature16179. Epub 2015 Nov 25. No abstract available.


Computational reconstitution of spine calcium transients from individual proteins.

Bartol TM, Keller DX, Kinney JP, Bajaj CL, Harris KM, Sejnowski TJ, Kennedy MB.

Front Synaptic Neurosci. 2015 Oct 7;7:17. doi: 10.3389/fnsyn.2015.00017. eCollection 2015.


Periodic Forcing of Inhibition-Stabilized Networks: Nonlinear Resonances and Phase-Amplitude Coupling.

Veltz R, Sejnowski TJ.

Neural Comput. 2015 Dec;27(12):2477-509. doi: 10.1162/NECO_a_00786. Epub 2015 Oct 23.


Characterization of spatio-temporal epidural event-related potentials for mouse models of psychiatric disorders.

Wang X, Pinto-Duarte A, Behrens MM, Zhou X, Sejnowski TJ.

Sci Rep. 2015 Oct 13;5:14964. doi: 10.1038/srep14964.


Correlated Percolation, Fractal Structures, and Scale-Invariant Distribution of Clusters in Natural Images.

Saremi S, Sejnowski TJ.

IEEE Trans Pattern Anal Mach Intell. 2016 May;38(5):1016-20. doi: 10.1109/TPAMI.2015.2481402. Epub 2015 Sep 23.


Abnormal Gamma Oscillations in N-Methyl-D-Aspartate Receptor Hypofunction Models of Schizophrenia.

Jadi MP, Behrens MM, Sejnowski TJ.

Biol Psychiatry. 2016 May 1;79(9):716-26. doi: 10.1016/j.biopsych.2015.07.005. Epub 2015 Jul 17. Review.


Disruption of mGluR5 in parvalbumin-positive interneurons induces core features of neurodevelopmental disorders.

Barnes SA, Pinto-Duarte A, Kappe A, Zembrzycki A, Metzler A, Mukamel EA, Lucero J, Wang X, Sejnowski TJ, Markou A, Behrens MM.

Mol Psychiatry. 2015 Oct;20(10):1161-72. doi: 10.1038/mp.2015.113. Epub 2015 Aug 11.


Monitoring Spiking Activity of Many Individual Neurons in Invertebrate Ganglia.

Frost WN, Brandon CJ, Bruno AM, Humphries MD, Moore-Kochlacs C, Sejnowski TJ, Wang J, Hill ES.

Adv Exp Med Biol. 2015;859:127-45. doi: 10.1007/978-3-319-17641-3_5. Review.


Spectrum of power laws for curved hand movements.

Huh D, Sejnowski TJ.

Proc Natl Acad Sci U S A. 2015 Jul 21;112(29):E3950-8. doi: 10.1073/pnas.1510208112. Epub 2015 Jul 6.


Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain.

Mo A, Mukamel EA, Davis FP, Luo C, Henry GL, Picard S, Urich MA, Nery JR, Sejnowski TJ, Lister R, Eddy SR, Ecker JR, Nathans J.

Neuron. 2015 Jun 17;86(6):1369-84. doi: 10.1016/j.neuron.2015.05.018.


Human body epigenome maps reveal noncanonical DNA methylation variation.

Schultz MD, He Y, Whitaker JW, Hariharan M, Mukamel EA, Leung D, Rajagopal N, Nery JR, Urich MA, Chen H, Lin S, Lin Y, Jung I, Schmitt AD, Selvaraj S, Ren B, Sejnowski TJ, Wang W, Ecker JR.

Nature. 2015 Jul 9;523(7559):212-6. doi: 10.1038/nature14465. Epub 2015 Jun 1. Erratum in: Nature. 2016 Feb 11;530(7589):242.


Discovering independent parameters in complex dynamical systems.

Lainscsek C, Weyhenmeyer J, Sejnowski TJ, Letellier C.

Chaos Solitons Fractals. 2015 Jul;76:182-189.


Vernon Mountcastle: Father of neuroscience.

Sejnowski TJ.

Proc Natl Acad Sci U S A. 2015 May 26;112(21):6523-4. doi: 10.1073/pnas.1506644112. Epub 2015 May 12. No abstract available.


Brains, genes, and primates.

Izpisua Belmonte JC, Callaway EM, Caddick SJ, Churchland P, Feng G, Homanics GE, Lee KF, Leopold DA, Miller CT, Mitchell JF, Mitalipov S, Moutri AR, Movshon JA, Okano H, Reynolds JH, Ringach D, Sejnowski TJ, Silva AC, Strick PL, Wu J, Zhang F.

Neuron. 2015 May 6;86(3):617-31. doi: 10.1016/j.neuron.2015.03.021. Review. Erratum in: Neuron. 2015 Aug 5;87(3):671.


Summary: Cognition in 2014.

Sejnowski TJ.

Cold Spring Harb Symp Quant Biol. 2014;79:237-41. doi: 10.1101/sqb.2014.79.024885. Epub 2015 May 6. Review.

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