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Items: 29

1.

Regulation of antibiotic production in Actinobacteria: new perspectives from the post-genomic era.

van der Heul HU, Bilyk BL, McDowall KJ, Seipke RF, van Wezel GP.

Nat Prod Rep. 2018 Jun 20;35(6):575-604. doi: 10.1039/c8np00012c. Review.

PMID:
29721572
2.

Biosynthesis of the 15-Membered Ring Depsipeptide Neoantimycin.

Skyrud W, Liu J, Thankachan D, Cabrera M, Seipke RF, Zhang W.

ACS Chem Biol. 2018 May 18;13(5):1398-1406. doi: 10.1021/acschembio.8b00298. Epub 2018 May 2.

3.

Revisiting unexploited antibiotics in search of new antibacterial drug candidates: the case of γ-actinorhodin.

Nass NM, Farooque S, Hind C, Wand ME, Randall CP, Sutton JM, Seipke RF, Rayner CM, O'Neill AJ.

Sci Rep. 2017 Dec 12;7(1):17419. doi: 10.1038/s41598-017-17232-1.

4.

Complete genome sequence of Streptomyces formicae KY5, the formicamycin producer.

Holmes NA, Devine R, Qin Z, Seipke RF, Wilkinson B, Hutchings MI.

J Biotechnol. 2018 Jan 10;265:116-118. doi: 10.1016/j.jbiotec.2017.11.011. Epub 2017 Nov 27.

5.

A phylogenetic and evolutionary analysis of antimycin biosynthesis.

Joynt R, Seipke RF.

Microbiology. 2018 Jan;164(1):28-39. doi: 10.1099/mic.0.000572. Epub 2017 Nov 7.

6.

The MtrAB two-component system controls antibiotic production in Streptomyces coelicolor A3(2).

Som NF, Heine D, Holmes N, Knowles F, Chandra G, Seipke RF, Hoskisson PA, Wilkinson B, Hutchings MI.

Microbiology. 2017 Oct;163(10):1415-1419. doi: 10.1099/mic.0.000524. Epub 2017 Sep 8.

7.

The Conserved Actinobacterial Two-Component System MtrAB Coordinates Chloramphenicol Production with Sporulation in Streptomyces venezuelae NRRL B-65442.

Som NF, Heine D, Holmes NA, Munnoch JT, Chandra G, Seipke RF, Hoskisson PA, Wilkinson B, Hutchings MI.

Front Microbiol. 2017 Jun 28;8:1145. doi: 10.3389/fmicb.2017.01145. eCollection 2017.

8.

Formicamycins, antibacterial polyketides produced by Streptomyces formicae isolated from African Tetraponera plant-ants.

Qin Z, Munnoch JT, Devine R, Holmes NA, Seipke RF, Wilkinson KA, Wilkinson B, Hutchings MI.

Chem Sci. 2017 Apr 1;8(4):3218-3227. doi: 10.1039/c6sc04265a. Epub 2017 Feb 13.

9.

Coordinate Regulation of Antimycin and Candicidin Biosynthesis.

McLean TC, Hoskisson PA, Seipke RF.

mSphere. 2016 Dec 7;1(6). pii: e00305-16. eCollection 2016 Nov-Dec.

10.

Minimum Information about a Biosynthetic Gene cluster.

Medema MH, Kottmann R, Yilmaz P, Cummings M, Biggins JB, Blin K, de Bruijn I, Chooi YH, Claesen J, Coates RC, Cruz-Morales P, Duddela S, Düsterhus S, Edwards DJ, Fewer DP, Garg N, Geiger C, Gomez-Escribano JP, Greule A, Hadjithomas M, Haines AS, Helfrich EJ, Hillwig ML, Ishida K, Jones AC, Jones CS, Jungmann K, Kegler C, Kim HU, Kötter P, Krug D, Masschelein J, Melnik AV, Mantovani SM, Monroe EA, Moore M, Moss N, Nützmann HW, Pan G, Pati A, Petras D, Reen FJ, Rosconi F, Rui Z, Tian Z, Tobias NJ, Tsunematsu Y, Wiemann P, Wyckoff E, Yan X, Yim G, Yu F, Xie Y, Aigle B, Apel AK, Balibar CJ, Balskus EP, Barona-Gómez F, Bechthold A, Bode HB, Borriss R, Brady SF, Brakhage AA, Caffrey P, Cheng YQ, Clardy J, Cox RJ, De Mot R, Donadio S, Donia MS, van der Donk WA, Dorrestein PC, Doyle S, Driessen AJ, Ehling-Schulz M, Entian KD, Fischbach MA, Gerwick L, Gerwick WH, Gross H, Gust B, Hertweck C, Höfte M, Jensen SE, Ju J, Katz L, Kaysser L, Klassen JL, Keller NP, Kormanec J, Kuipers OP, Kuzuyama T, Kyrpides NC, Kwon HJ, Lautru S, Lavigne R, Lee CY, Linquan B, Liu X, Liu W, Luzhetskyy A, Mahmud T, Mast Y, Méndez C, Metsä-Ketelä M, Micklefield J, Mitchell DA, Moore BS, Moreira LM, Müller R, Neilan BA, Nett M, Nielsen J, O'Gara F, Oikawa H, Osbourn A, Osburne MS, Ostash B, Payne SM, Pernodet JL, Petricek M, Piel J, Ploux O, Raaijmakers JM, Salas JA, Schmitt EK, Scott B, Seipke RF, Shen B, Sherman DH, Sivonen K, Smanski MJ, Sosio M, Stegmann E, Süssmuth RD, Tahlan K, Thomas CM, Tang Y, Truman AW, Viaud M, Walton JD, Walsh CT, Weber T, van Wezel GP, Wilkinson B, Willey JM, Wohlleben W, Wright GD, Ziemert N, Zhang C, Zotchev SB, Breitling R, Takano E, Glöckner FO.

Nat Chem Biol. 2015 Sep;11(9):625-31. doi: 10.1038/nchembio.1890. No abstract available.

11.

Strain-level diversity of secondary metabolism in Streptomyces albus.

Seipke RF.

PLoS One. 2015 Jan 30;10(1):e0116457. doi: 10.1371/journal.pone.0116457. eCollection 2015.

12.

Biosynthesis of antimycins with a reconstituted 3-formamidosalicylate pharmacophore in Escherichia coli.

Liu J, Zhu X, Seipke RF, Zhang W.

ACS Synth Biol. 2015 May 15;4(5):559-65. doi: 10.1021/sb5003136. Epub 2014 Oct 7.

13.

Regulation of antimycin biosynthesis by the orphan ECF RNA polymerase sigma factor σ (AntA.).

Seipke RF, Patrick E, Hutchings MI.

PeerJ. 2014 Feb 6;2:e253. doi: 10.7717/peerj.253. eCollection 2014.

14.

The regulation and biosynthesis of antimycins.

Seipke RF, Hutchings MI.

Beilstein J Org Chem. 2013 Nov 19;9:2556-63. doi: 10.3762/bjoc.9.290. Review.

15.

Analysis of the bacterial communities associated with two ant-plant symbioses.

Seipke RF, Barke J, Heavens D, Yu DW, Hutchings MI.

Microbiologyopen. 2013 Apr;2(2):276-83. doi: 10.1002/mbo3.73. Epub 2013 Feb 17.

16.

Mammalian cell entry genes in Streptomyces may provide clues to the evolution of bacterial virulence.

Clark LC, Seipke RF, Prieto P, Willemse J, van Wezel GP, Hutchings MI, Hoskisson PA.

Sci Rep. 2013;3:1109. doi: 10.1038/srep01109. Epub 2013 Jan 23.

17.

Use and discovery of chemical elicitors that stimulate biosynthetic gene clusters in Streptomyces bacteria.

Moore JM, Bradshaw E, Seipke RF, Hutchings MI, McArthur M.

Methods Enzymol. 2012;517:367-85. doi: 10.1016/B978-0-12-404634-4.00018-8.

PMID:
23084948
18.

Isolating antifungals from fungus-growing ant symbionts using a genome-guided chemistry approach.

Seipke RF, Grüschow S, Goss RJ, Hutchings MI.

Methods Enzymol. 2012;517:47-70. doi: 10.1016/B978-0-12-404634-4.00003-6.

PMID:
23084933
19.

Streptomyces as symbionts: an emerging and widespread theme?

Seipke RF, Kaltenpoth M, Hutchings MI.

FEMS Microbiol Rev. 2012 Jul;36(4):862-76. doi: 10.1111/j.1574-6976.2011.00313.x. Epub 2011 Dec 2. Review.

20.

A single Streptomyces symbiont makes multiple antifungals to support the fungus farming ant Acromyrmex octospinosus.

Seipke RF, Barke J, Brearley C, Hill L, Yu DW, Goss RJ, Hutchings MI.

PLoS One. 2011;6(8):e22028. doi: 10.1371/journal.pone.0022028. Epub 2011 Aug 3.

21.

The plant pathogen Streptomyces scabies 87-22 has a functional pyochelin biosynthetic pathway that is regulated by TetR- and AfsR-family proteins.

Seipke RF, Song L, Bicz J, Laskaris P, Yaxley AM, Challis GL, Loria R.

Microbiology. 2011 Sep;157(Pt 9):2681-93. doi: 10.1099/mic.0.047977-0. Epub 2011 Jul 14.

PMID:
21757492
22.

Fungus-growing Allomerus ants are associated with antibiotic-producing actinobacteria.

Seipke RF, Barke J, Ruiz-Gonzalez MX, Orivel J, Yu DW, Hutchings MI.

Antonie Van Leeuwenhoek. 2012 Feb;101(2):443-7. doi: 10.1007/s10482-011-9621-y. Epub 2011 Jul 12.

PMID:
21748399
23.

Draft genome sequence of Streptomyces strain S4, a symbiont of the leaf-cutting ant Acromyrmex octospinosus.

Seipke RF, Crossman L, Drou N, Heavens D, Bibb MJ, Caccamo M, Hutchings MI.

J Bacteriol. 2011 Aug;193(16):4270-1. doi: 10.1128/JB.05275-11. Epub 2011 Jun 17.

24.

A mutualistic microbiome: How do fungus-growing ants select their antibiotic-producing bacteria?

Barke J, Seipke RF, Yu DW, Hutchings MI.

Commun Integr Biol. 2011 Jan;4(1):41-3. doi: 10.4161/cib.4.1.13552.

25.

A mixed community of actinomycetes produce multiple antibiotics for the fungus farming ant Acromyrmex octospinosus.

Barke J, Seipke RF, Grüschow S, Heavens D, Drou N, Bibb MJ, Goss RJ, Yu DW, Hutchings MI.

BMC Biol. 2010 Aug 26;8:109. doi: 10.1186/1741-7007-8-109.

26.

Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions.

Bignell DR, Seipke RF, Huguet-Tapia JC, Chambers AH, Parry RJ, Loria R.

Mol Plant Microbe Interact. 2010 Feb;23(2):161-75. doi: 10.1094/MPMI-23-2-0161.

27.

Hopanoids are not essential for growth of Streptomyces scabies 87-22.

Seipke RF, Loria R.

J Bacteriol. 2009 Aug;191(16):5216-23. doi: 10.1128/JB.00390-09. Epub 2009 Jun 5.

28.

Streptomyces scabies 87-22 possesses a functional tomatinase.

Seipke RF, Loria R.

J Bacteriol. 2008 Dec;190(23):7684-92. doi: 10.1128/JB.01010-08. Epub 2008 Oct 3.

29.

Thaxtomin biosynthesis: the path to plant pathogenicity in the genus Streptomyces.

Loria R, Bignell DR, Moll S, Huguet-Tapia JC, Joshi MV, Johnson EG, Seipke RF, Gibson DM.

Antonie Van Leeuwenhoek. 2008 Jun;94(1):3-10. doi: 10.1007/s10482-008-9240-4. Epub 2008 Apr 5.

PMID:
18392685

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