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Items: 1 to 50 of 222

1.

Atomic structures of RNA nanotubes and their comparison with DNA nanotubes.

Naskar S, Joshi H, Chakraborty B, Seeman NC, Maiti PK.

Nanoscale. 2019 Aug 8;11(31):14863-14878. doi: 10.1039/c9nr00786e.

PMID:
31355845
2.

Organizing End-Site-Specific SWCNTs in Specific Loci Using DNA.

Pei H, Sha R, Wang X, Zheng M, Fan C, Canary JW, Seeman NC.

J Am Chem Soc. 2019 Jul 31;141(30):11923-11928. doi: 10.1021/jacs.9b03432. Epub 2019 Jul 22.

PMID:
31282152
3.

Designing Higher Resolution Self-Assembled 3D DNA Crystals via Strand Terminus Modifications.

Ohayon YP, Hernandez C, Chandrasekaran AR, Wang X, Abdallah HO, Jong MA, Mohsen MG, Sha R, Birktoft JJ, Lukeman PS, Chaikin PM, Ginell SL, Mao C, Seeman NC.

ACS Nano. 2019 Jul 23;13(7):7957-7965. doi: 10.1021/acsnano.9b02430. Epub 2019 Jul 2.

PMID:
31264845
4.

Introduction: Nucleic Acid Nanotechnology.

Krishnan Y, Seeman NC.

Chem Rev. 2019 May 22;119(10):6271-6272. doi: 10.1021/acs.chemrev.9b00181. No abstract available.

PMID:
31117417
5.

Forum on Translational DNA Nanotechnology.

Seeman NC, Fan C, Wang S, Schanze K, Fernandez L.

ACS Appl Mater Interfaces. 2019 Apr 17;11(15):13833-13834. doi: 10.1021/acsami.9b04482. No abstract available.

PMID:
30991810
6.

Litters of self-replicating origami cross-tiles.

Zhuo R, Zhou F, He X, Sha R, Seeman NC, Chaikin PM.

Proc Natl Acad Sci U S A. 2019 Feb 5;116(6):1952-1957. doi: 10.1073/pnas.1812793116. Epub 2019 Jan 23.

7.

The PX Motif of DNA Binds Specifically to Escherichia coli DNA Polymerase I.

Gao X, Gethers M, Han SP, Goddard WA 3rd, Sha R, Cunningham RP, Seeman NC.

Biochemistry. 2019 Feb 12;58(6):575-581. doi: 10.1021/acs.biochem.8b01148. Epub 2018 Dec 28.

PMID:
30557012
8.

Modulating Self-Assembly of DNA Crystals with Rationally Designed Agents.

Zhao J, Zhao Y, Li Z, Wang Y, Sha R, Seeman NC, Mao C.

Angew Chem Int Ed Engl. 2018 Dec 10;57(50):16529-16532. doi: 10.1002/anie.201809757. Epub 2018 Nov 8.

PMID:
30240115
9.

Multivalent, multiflavored droplets by design.

Zhang Y, He X, Zhuo R, Sha R, Brujic J, Seeman NC, Chaikin PM.

Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):9086-9091. doi: 10.1073/pnas.1718511115. Epub 2018 Aug 27.

10.

DNA Nanotechnology: From the Pub to Information-Based Chemistry.

Seeman NC.

Methods Mol Biol. 2018;1811:1-9. doi: 10.1007/978-1-4939-8582-1_1.

PMID:
29926442
11.

Paranemic Crossover DNA: There and Back Again.

Wang X, Chandrasekaran AR, Shen Z, Ohayon YP, Wang T, Kizer ME, Sha R, Mao C, Yan H, Zhang X, Liao S, Ding B, Chakraborty B, Jonoska N, Niu D, Gu H, Chao J, Gao X, Li Y, Ciengshin T, Seeman NC.

Chem Rev. 2019 May 22;119(10):6273-6289. doi: 10.1021/acs.chemrev.8b00207. Epub 2018 Jun 18.

PMID:
29911864
12.

Charge splitters and charge transport junctions based on guanine quadruplexes.

Sha R, Xiang L, Liu C, Balaeff A, Zhang Y, Zhang P, Li Y, Beratan DN, Tao N, Seeman NC.

Nat Nanotechnol. 2018 Apr;13(4):316-321. doi: 10.1038/s41565-018-0070-x. Epub 2018 Feb 26.

PMID:
29483600
13.

Construction of a DNA Origami Based Molecular Electro-optical Modulator.

Wang X, Li C, Niu D, Sha R, Seeman NC, Canary JW.

Nano Lett. 2018 Mar 14;18(3):2112-2115. doi: 10.1021/acs.nanolett.8b00332. Epub 2018 Feb 16.

PMID:
29430930
14.

Self-assembled three-dimensional chiral colloidal architecture.

Ben Zion MY, He X, Maass CC, Sha R, Seeman NC, Chaikin PM.

Science. 2017 Nov 3;358(6363):633-636. doi: 10.1126/science.aan5404.

PMID:
29097546
15.

Self-Assembly of 3D DNA Crystals Containing a Torsionally Stressed Component.

Hernandez C, Birktoft JJ, Ohayon YP, Chandrasekaran AR, Abdallah H, Sha R, Stojanoff V, Mao C, Seeman NC.

Cell Chem Biol. 2017 Nov 16;24(11):1401-1406.e2. doi: 10.1016/j.chembiol.2017.08.018. Epub 2017 Oct 5.

16.

Exponential growth and selection in self-replicating materials from DNA origami rafts.

He X, Sha R, Zhuo R, Mi Y, Chaikin PM, Seeman NC.

Nat Mater. 2017 Oct;16(10):993-997. doi: 10.1038/nmat4986. Epub 2017 Sep 18.

PMID:
28920942
17.

A device that operates within a self-assembled 3D DNA crystal.

Hao Y, Kristiansen M, Sha R, Birktoft JJ, Hernandez C, Mao C, Seeman NC.

Nat Chem. 2017 Aug;9(8):824-827. doi: 10.1038/nchem.2745. Epub 2017 Mar 14.

PMID:
28754940
18.

Tuning the Cavity Size and Chirality of Self-Assembling 3D DNA Crystals.

Simmons CR, Zhang F, MacCulloch T, Fahmi N, Stephanopoulos N, Liu Y, Seeman NC, Yan H.

J Am Chem Soc. 2017 Aug 16;139(32):11254-11260. doi: 10.1021/jacs.7b06485. Epub 2017 Aug 2.

PMID:
28731332
19.

Sequential self-assembly of DNA functionalized droplets.

Zhang Y, McMullen A, Pontani LL, He X, Sha R, Seeman NC, Brujic J, Chaikin PM.

Nat Commun. 2017 Jun 16;8(1):21. doi: 10.1038/s41467-017-00070-0.

20.

An Organic Semiconductor Organized into 3D DNA Arrays by "Bottom-up" Rational Design.

Wang X, Sha R, Kristiansen M, Hernandez C, Hao Y, Mao C, Canary JW, Seeman NC.

Angew Chem Int Ed Engl. 2017 Jun 1;56(23):6445-6448. doi: 10.1002/anie.201700462. Epub 2017 May 3.

PMID:
28466984
21.

Fluorescence and Energy Transfer in Dye-Labeled DNA Crystals.

Melinger JS, Sha R, Mao C, Seeman NC, Ancona MG.

J Phys Chem B. 2016 Dec 8;120(48):12287-12292. Epub 2016 Nov 28.

PMID:
27934217
22.

Facilitation of DNA self-assembly by relieving the torsional strains between building blocks.

Shen W, Liu Q, Ding B, Zhu C, Shen Z, Seeman NC.

Org Biomol Chem. 2017 Jan 4;15(2):465-469. doi: 10.1039/c6ob02281b.

PMID:
27924995
23.

Designed 3D DNA Crystals.

Seeman NC, Sha R, Birktoft J, Zheng J, Liu W, Wang T, Mao C.

Methods Mol Biol. 2017;1500:3-10.

PMID:
27812997
24.

Correction to "Construction and Structure Determination of a Three-dimensional DNA Crystal".

Simmons CR, Zhang F, Birktoft JJ, Qi X, Han D, Liu Y, Sha R, Abdallah H, Hernandez C, Ohayon Y, Seeman NC, Yan H.

J Am Chem Soc. 2016 Sep 28;138(38):12690. doi: 10.1021/jacs.6b09106. Epub 2016 Sep 19. No abstract available.

PMID:
27643407
25.

Construction and Structure Determination of a Three-Dimensional DNA Crystal.

Simmons CR, Zhang F, Birktoft JJ, Qi X, Han D, Liu Y, Sha R, Abdallah HO, Hernandez C, Ohayon YP, Seeman NC, Yan H.

J Am Chem Soc. 2016 Aug 10;138(31):10047-54. doi: 10.1021/jacs.6b06508. Epub 2016 Aug 2. Erratum in: J Am Chem Soc. 2016 Sep 28;138(38):12690.

PMID:
27447429
26.

Nanoscale Structure and Elasticity of Pillared DNA Nanotubes.

Joshi H, Kaushik A, Seeman NC, Maiti PK.

ACS Nano. 2016 Aug 23;10(8):7780-91. doi: 10.1021/acsnano.6b03360. Epub 2016 Jul 26.

PMID:
27400249
27.

Stabilisation of self-assembled DNA crystals by triplex-directed photo-cross-linking.

Abdallah HO, Ohayon YP, Chandrasekaran AR, Sha R, Fox KR, Brown T, Rusling DA, Mao C, Seeman NC.

Chem Commun (Camb). 2016 Jun 28;52(51):8014-7. doi: 10.1039/c6cc03695c. Epub 2016 Jun 6.

PMID:
27265774
28.

Topological Linkage of DNA Tiles Bonded by Paranemic Cohesion.

Ohayon YP, Sha R, Flint O, Chandrasekaran AR, Abdallah HO, Wang T, Wang X, Zhang X, Seeman NC.

ACS Nano. 2015 Oct 27;9(10):10296-303. doi: 10.1021/acsnano.5b04333. Epub 2015 Sep 23.

PMID:
26364680
29.

Covalent Linkage of One-Dimensional DNA Arrays Bonded by Paranemic Cohesion.

Ohayon YP, Sha R, Flint O, Liu W, Chakraborty B, Subramanian HK, Zheng J, Chandrasekaran AR, Abdallah HO, Wang X, Zhang X, Seeman NC.

ACS Nano. 2015 Oct 27;9(10):10304-12. doi: 10.1021/acsnano.5b04335. Epub 2015 Sep 11.

PMID:
26343906
30.

The unusual and dynamic character of PX-DNA.

Niu D, Jiang H, Sha R, Canary JW, Seeman NC.

Nucleic Acids Res. 2015 Sep 3;43(15):7201-6. doi: 10.1093/nar/gkv739. Epub 2015 Jul 15.

31.

Post-Assembly Stabilization of Rationally Designed DNA Crystals.

Zhao J, Chandrasekaran AR, Li Q, Li X, Sha R, Seeman NC, Mao C.

Angew Chem Int Ed Engl. 2015 Aug 17;54(34):9936-9. doi: 10.1002/anie.201503610. Epub 2015 Jul 1.

PMID:
26136359
32.

Molecular ping-pong Game of Life on a two-dimensional DNA origami array.

Jonoska N, Seeman NC.

Philos Trans A Math Phys Eng Sci. 2015 Jul 28;373(2046). pii: 20140215. doi: 10.1098/rsta.2014.0215.

PMID:
26078341
33.

A Signal-Passing DNA-Strand-Exchange Mechanism for Active Self-Assembly of DNA Nanostructures.

Padilla JE, Sha R, Kristiansen M, Chen J, Jonoska N, Seeman NC.

Angew Chem Int Ed Engl. 2015 May 11;54(20):5939-42. doi: 10.1002/anie.201500252. Epub 2015 Mar 24.

34.

Nanomaterials. Programmable materials and the nature of the DNA bond.

Jones MR, Seeman NC, Mirkin CA.

Science. 2015 Feb 20;347(6224):1260901. doi: 10.1126/science.1260901. Review.

PMID:
25700524
35.

Synthesising Topological Links.

Baas NA, Seeman NC, Stacey A.

J Math Chem. 2015 Jan;53(1):183-199.

36.

Templated DNA ligation with thiol chemistry.

Li D, Wang X, Shi F, Sha R, Seeman NC, Canary JW.

Org Biomol Chem. 2014 Nov 28;12(44):8823-7. doi: 10.1039/c4ob01552e.

PMID:
25283556
37.

Guest editorial: nucleic acid nanotechnology.

Seeman NC, Mao C, Yan H.

Acc Chem Res. 2014 Jun 17;47(6):1643-4. doi: 10.1021/ar500159g. No abstract available.

PMID:
25208051
38.

Amyloid fibrils nucleated and organized by DNA origami constructions.

Udomprasert A, Bongiovanni MN, Sha R, Sherman WB, Wang T, Arora PS, Canary JW, Gras SL, Seeman NC.

Nat Nanotechnol. 2014 Jul;9(7):537-41. doi: 10.1038/nnano.2014.102. Epub 2014 Jun 1.

39.

Functionalizing designer DNA crystals with a triple-helical veneer.

Rusling DA, Chandrasekaran AR, Ohayon YP, Brown T, Fox KR, Sha R, Mao C, Seeman NC.

Angew Chem Int Ed Engl. 2014 Apr 7;53(15):3979-82. doi: 10.1002/anie.201309914. Epub 2014 Mar 11.

40.

Kinetics of DNA-coated sticky particles.

Wu KT, Feng L, Sha R, Dreyfus R, Grosberg AY, Seeman NC, Chaikin PM.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Aug;88(2):022304. Epub 2013 Aug 12.

PMID:
24032830
41.

Computing by molecular self-assembly.

Jonoska N, Seeman NC.

Interface Focus. 2012 Aug 6;2(4):504-11. doi: 10.1098/rsfs.2011.0117. Epub 2012 Feb 8.

42.

Site-specific inter-strand cross-links of DNA duplexes.

Ye M, Guillaume J, Liu Y, Sha R, Wang R, Seeman NC, Canary JW.

Chem Sci. 2013 Mar 1;4(3):1319-1329.

43.

Cinnamate-based DNA photolithography.

Feng L, Romulus J, Li M, Sha R, Royer J, Wu KT, Xu Q, Seeman NC, Weck M, Chaikin P.

Nat Mater. 2013 Aug;12(8):747-53. doi: 10.1038/nmat3645. Epub 2013 May 19.

44.

DNA patchy particles.

Feng L, Dreyfus R, Sha R, Seeman NC, Chaikin PM.

Adv Mater. 2013 May 28;25(20):2779-83. doi: 10.1002/adma.201204864. Epub 2013 Apr 3.

PMID:
23554152
45.

Nucleic acids: new life, new materials.

Gait MJ, Komiyama M, Seeman NC, Seitz O, Micklefield J, Liu DR.

Org Biomol Chem. 2013 Apr 7;11(13):2058-9. doi: 10.1039/c3ob90017g. No abstract available.

PMID:
23429691
46.

Self-assembled DNA crystals: the impact on resolution of 5'-phosphates and the DNA source.

Sha R, Birktoft JJ, Nguyen N, Chandrasekaran AR, Zheng J, Zhao X, Mao C, Seeman NC.

Nano Lett. 2013 Feb 13;13(2):793-7. doi: 10.1021/nl304550c. Epub 2013 Jan 22.

47.
48.

Topological interaction by entangled DNA loops.

Feng L, Sha R, Seeman NC, Chaikin PM.

Phys Rev Lett. 2012 Nov 2;109(18):188301. Epub 2012 Nov 1.

49.

A Programmable Transducer Self-Assembled from DNA.

Chakraborty B, Jonoska N, Seeman NC.

Chem Sci. 2012 Jan 1;3(1):168-176. Epub 2011 Nov 10.

50.

Templated synthesis of nylon nucleic acids and characterization by nuclease digestion.

Liu Y, Wang R, Ding L, Sha R, Seeman NC, Canary JW.

Chem Sci. 2012;3(6):1930-1937. Epub 2012 Mar 8.

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