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Items: 30

1.

Purification and Functional Analysis of Plant Long Noncoding RNAs (lncRNA).

Do T, Qu Z, Searle I.

Methods Mol Biol. 2019;1933:131-147. doi: 10.1007/978-1-4939-9045-0_7.

PMID:
30945182
2.

Experimental reconstruction of double-stranded break repair-mediated plastid DNA insertion into the tobacco nucleus.

Wang D, Gu J, David R, Wang Z, Yang S, Searle IR, Zhu JK, Timmis JN.

Plant J. 2018 Jan;93(2):227-234. doi: 10.1111/tpj.13769. Epub 2017 Dec 16.

3.

Two SUMO Proteases SUMO PROTEASE RELATED TO FERTILITY1 and 2 Are Required for Fertility in Arabidopsis.

Liu L, Jiang Y, Zhang X, Wang X, Wang Y, Han Y, Coupland G, Jin JB, Searle I, Fu YF, Chen F.

Plant Physiol. 2017 Dec;175(4):1703-1719. doi: 10.1104/pp.17.00021. Epub 2017 Oct 24.

4.

Rapid Recovery Gene Downregulation during Excess-Light Stress and Recovery in Arabidopsis.

Crisp PA, Ganguly DR, Smith AB, Murray KD, Estavillo GM, Searle I, Ford E, Bogdanović O, Lister R, Borevitz JO, Eichten SR, Pogson BJ.

Plant Cell. 2017 Aug;29(8):1836-1863. doi: 10.1105/tpc.16.00828. Epub 2017 Jul 13.

5.

Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in plants.

Wang D, Qu Z, Yang L, Zhang Q, Liu ZH, Do T, Adelson DL, Wang ZY, Searle I, Zhu JK.

Plant J. 2017 Apr;90(1):133-146. doi: 10.1111/tpj.13481.

6.

Transcriptome-Wide Mapping of RNA 5-Methylcytosine in Arabidopsis mRNAs and Noncoding RNAs.

David R, Burgess A, Parker B, Li J, Pulsford K, Sibbritt T, Preiss T, Searle IR.

Plant Cell. 2017 Mar;29(3):445-460. doi: 10.1105/tpc.16.00751. Epub 2017 Jan 6.

7.

Origin and Functional Prediction of Pollen Allergens in Plants.

Chen M, Xu J, Devis D, Shi J, Ren K, Searle I, Zhang D.

Plant Physiol. 2016 Sep;172(1):341-57. doi: 10.1104/pp.16.00625. Epub 2016 Jul 19.

8.

Deciphering the epitranscriptome: A green perspective.

Burgess A, David R, Searle IR.

J Integr Plant Biol. 2016 Oct;58(10):822-835. doi: 10.1111/jipb.12483. Epub 2016 Jun 20. Review.

9.

MicroRNAs in Honey Bee Caste Determination.

Ashby R, Forêt S, Searle I, Maleszka R.

Sci Rep. 2016 Jan 7;6:18794. doi: 10.1038/srep18794.

10.

Genome-Wide Identification of MicroRNAs in Leaves and the Developing Head of Four Durum Genotypes during Water Deficit Stress.

Liu H, Searle IR, Watson-Haigh NS, Baumann U, Mather DE, Able AJ, Able JA.

PLoS One. 2015 Nov 12;10(11):e0142799. doi: 10.1371/journal.pone.0142799. eCollection 2015.

11.

Conservation of tRNA and rRNA 5-methylcytosine in the kingdom Plantae.

Burgess AL, David R, Searle IR.

BMC Plant Biol. 2015 Aug 14;15:199. doi: 10.1186/s12870-015-0580-8.

12.

Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development.

Cazzonelli CI, Vanstraelen M, Simon S, Yin K, Carron-Arthur A, Nisar N, Tarle G, Cuttriss AJ, Searle IR, Benkova E, Mathesius U, Masle J, Friml J, Pogson BJ.

PLoS One. 2013 Jul 29;8(7):e70069. doi: 10.1371/journal.pone.0070069. Print 2013.

13.

Functional characterisation of HvCO1, the barley (Hordeum vulgare) flowering time ortholog of CONSTANS.

Campoli C, Drosse B, Searle I, Coupland G, von Korff M.

Plant J. 2012 Mar;69(5):868-80. doi: 10.1111/j.1365-313X.2011.04839.x. Epub 2012 Jan 10.

14.

Mobile microRNAs hit the target.

Gursanscky NR, Searle IR, Carroll BJ.

Traffic. 2011 Nov;12(11):1475-82. doi: 10.1111/j.1600-0854.2011.01253.x. Epub 2011 Aug 17. Review.

15.

The clock primes defense at dawn.

Burgess A, Searle I.

Immunol Cell Biol. 2011 Aug;89(6):661-2. doi: 10.1038/icb.2011.30. Epub 2011 Apr 19. No abstract available.

PMID:
21502964
16.

Nodulation factor receptor kinase 1α controls nodule organ number in soybean (Glycine max L. Merr).

Indrasumunar A, Searle I, Lin MH, Kereszt A, Men A, Carroll BJ, Gresshoff PM.

Plant J. 2011 Jan;65(1):39-50. doi: 10.1111/j.1365-313X.2010.04398.x. Epub 2010 Nov 10.

17.

Nitrate regulates floral induction in Arabidopsis, acting independently of light, gibberellin and autonomous pathways.

Castro Marín I, Loef I, Bartetzko L, Searle I, Coupland G, Stitt M, Osuna D.

Planta. 2011 Mar;233(3):539-52. doi: 10.1007/s00425-010-1316-5. Epub 2010 Nov 27.

18.

JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis.

Searle IR, Pontes O, Melnyk CW, Smith LM, Baulcombe DC.

Genes Dev. 2010 May 15;24(10):986-91. doi: 10.1101/gad.579910.

19.

Inactivation of duplicated nod factor receptor 5 (NFR5) genes in recessive loss-of-function non-nodulation mutants of allotetraploid soybean (Glycine max L. Merr.).

Indrasumunar A, Kereszt A, Searle I, Miyagi M, Li D, Nguyen CD, Men A, Carroll BJ, Gresshoff PM.

Plant Cell Physiol. 2010 Feb;51(2):201-14. doi: 10.1093/pcp/pcp178. Epub 2009 Dec 9.

PMID:
20007291
20.

An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II.

Huang L, Jones AM, Searle I, Patel K, Vogler H, Hubner NC, Baulcombe DC.

Nat Struct Mol Biol. 2009 Jan;16(1):91-3. doi: 10.1038/nsmb.1539. Epub 2008 Dec 14.

PMID:
19079263
21.

An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis.

Smith LM, Pontes O, Searle I, Yelina N, Yousafzai FK, Herr AJ, Pikaard CS, Baulcombe DC.

Plant Cell. 2007 May;19(5):1507-21. Epub 2007 May 25.

22.

Small RNAs hit the big time.

Searle IR, Mosher RA, Melnyk CW, Baulcombe DC.

New Phytol. 2007;174(3):479-82. No abstract available.

23.

FT protein movement contributes to long-distance signaling in floral induction of Arabidopsis.

Corbesier L, Vincent C, Jang S, Fornara F, Fan Q, Searle I, Giakountis A, Farrona S, Gissot L, Turnbull C, Coupland G.

Science. 2007 May 18;316(5827):1030-3. Epub 2007 Apr 19.

24.

The transcription factor FLC confers a flowering response to vernalization by repressing meristem competence and systemic signaling in Arabidopsis.

Searle I, He Y, Turck F, Vincent C, Fornara F, Kröber S, Amasino RA, Coupland G.

Genes Dev. 2006 Apr 1;20(7):898-912.

25.

A rapid and versatile combined DNA/RNA extraction protocol and its application to the analysis of a novel DNA marker set polymorphic between Arabidopsis thaliana ecotypes Col-0 and Landsberg erecta.

Berendzen K, Searle I, Ravenscroft D, Koncz C, Batschauer A, Coupland G, Somssich IE, Ülker B.

Plant Methods. 2005 Aug 23;1(1):4. doi: 10.1186/1746-4811-1-4.

26.

Induction of flowering by seasonal changes in photoperiod.

Searle I, Coupland G.

EMBO J. 2004 Mar 24;23(6):1217-22. Epub 2004 Mar 4. Review.

27.

Randomly Amplified DNA Fingerprinting: A Culmination of DNA Marker Technologies Based on Arbitrarily-Primed PCR Amplification.

Waldron J, Peace CP, Searle IR, Furtado A, Wade N, Findlay I, Graham MW, Carroll BJ.

J Biomed Biotechnol. 2002;2(3):141-150.

28.

Long-distance signaling in nodulation directed by a CLAVATA1-like receptor kinase.

Searle IR, Men AE, Laniya TS, Buzas DM, Iturbe-Ormaetxe I, Carroll BJ, Gresshoff PM.

Science. 2003 Jan 3;299(5603):109-12. Epub 2002 Oct 31.

29.

Inheritance and mapping of 11 avirulence genes in Phytophthora sojae.

May KJ, Whisson SC, Zwart RS, Searle IR, Irwin JA, Maclean DJ, Carroll BJ, Drenth A.

Fungal Genet Biol. 2002 Oct;37(1):1-12.

PMID:
12223184
30.

Binuclear metal centers in plant purple acid phosphatases: Fe-Mn in sweet potato and Fe-Zn in soybean.

Schenk G, Ge Y, Carrington LE, Wynne CJ, Searle IR, Carroll BJ, Hamilton S, de Jersey J.

Arch Biochem Biophys. 1999 Oct 15;370(2):183-9.

PMID:
10510276

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