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Items: 1 to 50 of 162

1.

Equations defined using gene expression and histological data resolve coeliac disease biopsies within the Marsh score continuum.

Charlesworth RPG, Agnew LL, Scott DR, Andronicos NM.

Comput Biol Med. 2019 Jan;104:183-196. doi: 10.1016/j.compbiomed.2018.10.036. Epub 2018 Nov 3.

PMID:
30500563
2.

Nonpharmacological Management of Behavioral and Psychological Symptoms of Dementia: What Works, in What Circumstances, and Why?

Caspar S, Davis ED, Douziech A, Scott DR.

Innov Aging. 2018 Mar 20;2(1):igy001. doi: 10.1093/geroni/igy001. eCollection 2018 Jan.

3.

Celiac disease gene expression data can be used to classify biopsies along the Marsh score severity scale.

Charlesworth RPG, Agnew LL, Scott DR, Andronicos NM.

J Gastroenterol Hepatol. 2019 Jan;34(1):169-177. doi: 10.1111/jgh.14369. Epub 2018 Jul 31.

PMID:
29972865
4.

Measurement of Internal pH in Helicobacter pylori by Using Green Fluorescent Protein Fluorimetry.

Wen Y, Scott DR, Vagin O, Tokhtaeva E, Marcus EA, Sachs G.

J Bacteriol. 2018 Jun 25;200(14). pii: e00178-18. doi: 10.1128/JB.00178-18. Print 2018 Jul 15.

5.

Acid-regulated gene expression of Helicobacter pylori: Insight into acid protection and gastric colonization.

Marcus EA, Sachs G, Scott DR.

Helicobacter. 2018 Jun;23(3):e12490. doi: 10.1111/hel.12490. Epub 2018 Apr 25.

6.

Can the sensitivity of the histopathological diagnosis of coeliac disease be increased and can treatment progression be monitored using mathematical modelling of histological sections? - A pilot study.

Charlesworth RPG, Andronicos NM, Scott DR, McFarlane JR, Agnew LL.

Adv Med Sci. 2017 Mar;62(1):136-142. doi: 10.1016/j.advms.2016.06.002. Epub 2016 Jun 14.

PMID:
28260668
7.

A Synthesis of Exiguaquinol Dessulfate.

Schwarzwalder GM, Scott DR, Vanderwal CD.

Chemistry. 2016 Dec 12;22(50):17953-17957. doi: 10.1002/chem.201604506. Epub 2016 Oct 26.

8.

The role of acid inhibition in Helicobacter pylori eradication.

Scott DR, Sachs G, Marcus EA.

F1000Res. 2016 Jul 19;5. pii: F1000 Faculty Rev-1747. doi: 10.12688/f1000research.8598.1. eCollection 2016. Review.

9.

Eradication of Helicobacter pylori Infection.

Marcus EA, Sachs G, Scott DR.

Curr Gastroenterol Rep. 2016 Jul;18(7):33. doi: 10.1007/s11894-016-0509-x. Review.

10.

Differential utilization of binding loop flexibility in T cell receptor ligand selection and cross-reactivity.

Ayres CM, Scott DR, Corcelli SA, Baker BM.

Sci Rep. 2016 Apr 27;6:25070. doi: 10.1038/srep25070.

11.

Vonoprazan: MarKed Competition for PPIs?

Scott DR, Marcus EA, Sachs G.

Dig Dis Sci. 2016 Jul;61(7):1783-4. doi: 10.1007/s10620-016-4164-8. No abstract available.

12.

Septin oligomerization regulates persistent expression of ErbB2/HER2 in gastric cancer cells.

Marcus EA, Tokhtaeva E, Turdikulova S, Capri J, Whitelegge JP, Scott DR, Sachs G, Berditchevski F, Vagin O.

Biochem J. 2016 Jun 15;473(12):1703-18. doi: 10.1042/BCJ20160203. Epub 2016 Apr 5.

13.

Diel Surface Temperature Range Scales with Lake Size.

Woolway RI, Jones ID, Maberly SC, French JR, Livingstone DM, Monteith DT, Simpson GL, Thackeray SJ, Andersen MR, Battarbee RW, DeGasperi CL, Evans CD, de Eyto E, Feuchtmayr H, Hamilton DP, Kernan M, Krokowski J, Rimmer A, Rose KC, Rusak JA, Ryves DB, Scott DR, Shilland EM, Smyth RL, Staehr PA, Thomas R, Waldron S, Weyhenmeyer GA.

PLoS One. 2016 Mar 29;11(3):e0152466. doi: 10.1371/journal.pone.0152466. eCollection 2016.

14.

Efficient decellularization of whole porcine kidneys improves reseeded cell behavior.

Poornejad N, Momtahan N, Salehi AS, Scott DR, Fronk CA, Roeder BL, Reynolds PR, Bundy BC, Cook AD.

Biomed Mater. 2016 Mar 10;11(2):025003. doi: 10.1088/1748-6041/11/2/025003.

PMID:
26963774
15.

Letter: vonoprazan, a long-lasting acid suppressor of the gastric H+, K+-ATPases with - implications for renal H+, K+-ATPases; authors' reply.

Sachs G, Scott DR.

Aliment Pharmacol Ther. 2016 Feb;43(3):443. doi: 10.1111/apt.13487. No abstract available.

16.

Corrigendum. The binding selectivity of vonoprazan (TAK-438) to the gastric H+,K+-ATPase.

Scott DR, Munson KB, Marcus EA, Lambrecht NW, Sachs G.

Aliment Pharmacol Ther. 2016 Jan;43(2):315. doi: 10.1111/apt.13493. No abstract available.

17.

The binding selectivity of vonoprazan (TAK-438) to the gastric H+, K+ -ATPase.

Scott DR, Munson KB, Marcus EA, Lambrecht NW, Sachs G.

Aliment Pharmacol Ther. 2015 Dec;42(11-12):1315-26. doi: 10.1111/apt.13414. Epub 2015 Sep 30. Erratum in: Aliment Pharmacol Ther. 2016 Jan;43(2):315.

18.

Differential skin test reactivity to pollens in pollen food allergy syndrome versus allergic rhinitis.

Ta V, Scott DR, Chin WK, Wineinger NE, Kelso JM, White AA.

Allergy Asthma Proc. 2015 Sep-Oct;36(5):379-85. doi: 10.2500/aap.2015.36.3862.

PMID:
26314819
19.

Colloidal bismuth subcitrate impedes proton entry into Helicobacter pylori and increases the efficacy of growth-dependent antibiotics.

Marcus EA, Sachs G, Scott DR.

Aliment Pharmacol Ther. 2015 Oct;42(7):922-33. doi: 10.1111/apt.13346. Epub 2015 Aug 4.

20.

Reconstitution of Functionalized Transmembrane Domains of Receptor Proteins into Biomimetic Membranes.

Scott DR, Silin V, Nanda H.

Langmuir. 2015 Aug 25;31(33):9115-24. doi: 10.1021/acs.langmuir.5b01990. Epub 2015 Aug 11.

PMID:
26221793
21.

Phosphorylation-dependent and Phosphorylation-independent Regulation of Helicobacter pylori Acid Acclimation by the ArsRS Two-component System.

Marcus EA, Sachs G, Wen Y, Scott DR.

Helicobacter. 2016 Feb;21(1):69-81. doi: 10.1111/hel.12235. Epub 2015 May 22.

22.

Freezing/Thawing without Cryoprotectant Damages Native but not Decellularized Porcine Renal Tissue.

Poornejad N, Frost TS, Scott DR, Elton BB, Reynolds PR, Roeder BL, Cook AD.

Organogenesis. 2015;11(1):30-45. doi: 10.1080/15476278.2015.1022009. Erratum in: Organogenesis. 2017 Jul 3;13(3):114.

23.

Supraesophageal Reflux: Correlation of Position and Occurrence of Acid Reflux-Effect of Head-of-Bed Elevation on Supine Reflux.

Scott DR, Simon RA.

J Allergy Clin Immunol Pract. 2015 May-Jun;3(3):356-61. doi: 10.1016/j.jaip.2014.11.019. Epub 2015 Jan 14.

PMID:
25609349
24.

Increased ILC2s in the eosinophilic nasal polyp endotype are associated with corticosteroid responsiveness.

Walford HH, Lund SJ, Baum RE, White AA, Bergeron CM, Husseman J, Bethel KJ, Scott DR, Khorram N, Miller M, Broide DH, Doherty TA.

Clin Immunol. 2014 Nov;155(1):126-35. doi: 10.1016/j.clim.2014.09.007. Epub 2014 Sep 16.

25.

Gastric acid-dependent diseases: a twentieth-century revolution.

Sachs G, Shin JM, Munson K, Scott DR.

Dig Dis Sci. 2014 Jul;59(7):1358-69. doi: 10.1007/s10620-014-3104-8. No abstract available.

PMID:
24852882
26.

Supraesophageal reflux disease: a review of the literature.

Scott DR, Simon RA.

Allergy Asthma Proc. 2014 Mar-Apr;35(2):104-10. doi: 10.2500/aap.2014.35.3719. Review.

PMID:
24717786
27.

Approach to desensitization in aspirin-exacerbated respiratory disease.

Scott DR, White AA.

Ann Allergy Asthma Immunol. 2014 Jan;112(1):13-7. doi: 10.1016/j.anai.2013.09.011. Review. No abstract available.

PMID:
24331387
28.

Recurrent fevers and failure to thrive in an infant.

Scott DR, Chan S, Chang J, Broderick L, Hoffman HM.

Allergy Asthma Proc. 2013 Sep-Oct;34(5):473-9. doi: 10.2500/aap.2013.34.3672.

PMID:
23998246
29.

Helicobacter pylori impedes acid-induced tightening of gastric epithelial junctions.

Marcus EA, Vagin O, Tokhtaeva E, Sachs G, Scott DR.

Am J Physiol Gastrointest Liver Physiol. 2013 Nov 15;305(10):G731-9. doi: 10.1152/ajpgi.00209.2013. Epub 2013 Aug 29.

30.

Increased Peptide Contacts Govern High Affinity Binding of a Modified TCR Whilst Maintaining a Native pMHC Docking Mode.

Cole DK, Sami M, Scott DR, Rizkallah PJ, Borbulevych OY, Todorov PT, Moysey RK, Jakobsen BK, Boulter JM, Baker BM, Yi Li.

Front Immunol. 2013 Jun 26;4:168. doi: 10.3389/fimmu.2013.00168. eCollection 2013.

31.

The basis for limited specificity and MHC restriction in a T cell receptor interface.

Piepenbrink KH, Blevins SJ, Scott DR, Baker BM.

Nat Commun. 2013;4:1948. doi: 10.1038/ncomms2948.

32.

The role of ExbD in periplasmic pH homeostasis in Helicobacter pylori.

Marcus EA, Sachs G, Scott DR.

Helicobacter. 2013 Oct;18(5):363-72. doi: 10.1111/hel.12055. Epub 2013 Apr 21.

33.

Limitations of time-resolved fluorescence suggested by molecular simulations: assessing the dynamics of T cell receptor binding loops.

Scott DR, Vardeman CF 2nd, Corcelli SA, Baker BM.

Biophys J. 2012 Dec 19;103(12):2532-40. doi: 10.1016/j.bpj.2012.10.037. Epub 2012 Dec 18.

34.

Acid stress increases gene expression of proinflammatory cytokines in Madin-Darby canine kidney cells.

Raj S, Scott DR, Nguyen T, Sachs G, Kraut JA.

Am J Physiol Renal Physiol. 2013 Jan 1;304(1):F41-8. doi: 10.1152/ajprenal.00128.2012. Epub 2012 Oct 17. Erratum in: Am J Physiol Renal Physiol. 2013 Mar 1;304(5):F623.

35.

Structural and dynamic control of T-cell receptor specificity, cross-reactivity, and binding mechanism.

Baker BM, Scott DR, Blevins SJ, Hawse WF.

Immunol Rev. 2012 Nov;250(1):10-31. doi: 10.1111/j.1600-065X.2012.01165.x. Review.

PMID:
23046120
36.

The effects of varying acidity on Helicobacter pylori growth and the bactericidal efficacy of ampicillin.

Marcus EA, Inatomi N, Nagami GT, Sachs G, Scott DR.

Aliment Pharmacol Ther. 2012 Nov;36(10):972-9. doi: 10.1111/apt.12059. Epub 2012 Sep 25.

37.

Role of the Helicobacter pylori sensor kinase ArsS in protein trafficking and acid acclimation.

Marcus EA, Sachs G, Wen Y, Feng J, Scott DR.

J Bacteriol. 2012 Oct;194(20):5545-51. Epub 2012 Aug 3.

38.

Clinical human papillomavirus detection forecasts cervical cancer risk in women over 18 years of follow-up.

Castle PE, Glass AG, Rush BB, Scott DR, Wentzensen N, Gage JC, Buckland J, Rydzak G, Lorincz AT, Wacholder S.

J Clin Oncol. 2012 Sep 1;30(25):3044-50. doi: 10.1200/JCO.2011.38.8389. Epub 2012 Jul 30.

39.

Helicobacter pylori: Eradication or Preservation.

Sachs G, Scott DR.

F1000 Med Rep. 2012;4:7. doi: 10.3410/M4-7. Epub 2012 Apr 2.

40.

The role of the NMDA receptor in Helicobacter pylori-induced gastric damage.

Sachs G, Marcus EA, Scott DR.

Gastroenterology. 2011 Dec;141(6):1967-9. doi: 10.1053/j.gastro.2011.10.019. Epub 2011 Oct 25. No abstract available.

41.

Disparate degrees of hypervariable loop flexibility control T-cell receptor cross-reactivity, specificity, and binding mechanism.

Scott DR, Borbulevych OY, Piepenbrink KH, Corcelli SA, Baker BM.

J Mol Biol. 2011 Dec 2;414(3):385-400. doi: 10.1016/j.jmb.2011.10.006. Epub 2011 Oct 12.

42.

Gastric infection by Helicobacter pylori.

Sachs G, Scott DR, Wen Y.

Curr Gastroenterol Rep. 2011 Dec;13(6):540-6. doi: 10.1007/s11894-011-0226-4. Review.

43.

Application of a classification system and description of a combined manual therapy intervention: a case with low back related leg pain.

Petersen SM, Scott DR.

J Man Manip Ther. 2010 Jun;18(2):89-96. doi: 10.1179/106698110X12640740712572.

44.

A long-term prospective study of type-specific human papillomavirus infection and risk of cervical neoplasia among 20,000 women in the Portland Kaiser Cohort Study.

Schiffman M, Glass AG, Wentzensen N, Rush BB, Castle PE, Scott DR, Buckland J, Sherman ME, Rydzak G, Kirk P, Lorincz AT, Wacholder S, Burk RD.

Cancer Epidemiol Biomarkers Prev. 2011 Jul;20(7):1398-409. doi: 10.1158/1055-9965.EPI-11-0206. Epub 2011 May 20. Erratum in: Cancer Epidemiol Biomarkers Prev. 2012 Aug;21(8):1390-1.

45.

A novel approach to increase residents' involvement in reporting adverse events.

Scott DR, Weimer M, English C, Shaker L, Ward W, Choi D, Cedfeldt A, Girard D.

Acad Med. 2011 Jun;86(6):742-6. doi: 10.1097/ACM.0b013e318217e12a.

PMID:
21512369
46.

Regulation of Urease for Acid Habitation.

Sachs G, Scott DR, Weeks DL, Rektorscheck M, Melchers K.

In: Mobley HLT, Mendz GL, Hazell SL, editors. Helicobacter pylori: Physiology and Genetics. Washington (DC): ASM Press; 2001. Chapter 25.

47.

A cis-encoded antisense small RNA regulated by the HP0165-HP0166 two-component system controls expression of ureB in Helicobacter pylori.

Wen Y, Feng J, Scott DR, Marcus EA, Sachs G.

J Bacteriol. 2011 Jan;193(1):40-51. doi: 10.1128/JB.00800-10. Epub 2010 Oct 22.

48.

Adverse impact of hepatitis C virus infection on renal replacement therapy and renal transplant patients in Australia and New Zealand.

Scott DR, Wong JK, Spicer TS, Dent H, Mensah FK, McDonald S, Levy MT.

Transplantation. 2010 Dec 15;90(11):1165-71. doi: 10.1097/TP.0b013e3181f92548.

PMID:
20861806
49.

Clinical trial report: Eradication of Helicobacter pylori reduces the risk for subsequent gastric cancer.

Pisegna JR, Surti B, Scott DR.

Curr Gastroenterol Rep. 2010 Dec;12(6):427-30. doi: 10.1007/s11894-010-0138-8. No abstract available.

50.

Use of social media by residency program directors for resident selection.

Cain J, Scott DR, Smith K.

Am J Health Syst Pharm. 2010 Oct 1;67(19):1635-9. doi: 10.2146/ajhp090658.

PMID:
20852165

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