Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 15

1.

MSMBuilder: Statistical Models for Biomolecular Dynamics.

Harrigan MP, Sultan MM, Hernández CX, Husic BE, Eastman P, Schwantes CR, Beauchamp KA, McGibbon RT, Pande VS.

Biophys J. 2017 Jan 10;112(1):10-15. doi: 10.1016/j.bpj.2016.10.042.

2.

Markov State Models and tICA Reveal a Nonnative Folding Nucleus in Simulations of NuG2.

Schwantes CR, Shukla D, Pande VS.

Biophys J. 2016 Apr 26;110(8):1716-1719. doi: 10.1016/j.bpj.2016.03.026.

3.

Modeling molecular kinetics with tICA and the kernel trick.

Schwantes CR, Pande VS.

J Chem Theory Comput. 2015 Feb 10;11(2):600-8. doi: 10.1021/ct5007357.

4.

MDTraj: A Modern Open Library for the Analysis of Molecular Dynamics Trajectories.

McGibbon RT, Beauchamp KA, Harrigan MP, Klein C, Swails JM, Hernández CX, Schwantes CR, Wang LP, Lane TJ, Pande VS.

Biophys J. 2015 Oct 20;109(8):1528-32. doi: 10.1016/j.bpj.2015.08.015.

5.

Perspective: Markov models for long-timescale biomolecular dynamics.

Schwantes CR, McGibbon RT, Pande VS.

J Chem Phys. 2014 Sep 7;141(9):090901. doi: 10.1063/1.4895044.

6.

Dynamical phase transitions reveal amyloid-like states on protein folding landscapes.

Weber JK, Jack RL, Schwantes CR, Pande VS.

Biophys J. 2014 Aug 19;107(4):974-82. doi: 10.1016/j.bpj.2014.06.046.

7.

Complex pathways in folding of protein G explored by simulation and experiment.

Lapidus LJ, Acharya S, Schwantes CR, Wu L, Shukla D, King M, DeCamp SJ, Pande VS.

Biophys J. 2014 Aug 19;107(4):947-55. doi: 10.1016/j.bpj.2014.06.037.

8.

Statistical model selection for Markov models of biomolecular dynamics.

McGibbon RT, Schwantes CR, Pande VS.

J Phys Chem B. 2014 Jun 19;118(24):6475-81. doi: 10.1021/jp411822r. Epub 2014 Apr 25.

PMID:
24738580
9.

Probing the origins of two-state folding.

Lane TJ, Schwantes CR, Beauchamp KA, Pande VS.

J Chem Phys. 2013 Oct 14;139(14):145104. doi: 10.1063/1.4823502.

10.
11.

Towards a better understanding of the use of probiotics for preventing chytridiomycosis in Panamanian golden frogs.

Becker MH, Harris RN, Minbiole KP, Schwantes CR, Rollins-Smith LA, Reinert LK, Brucker RM, Domangue RJ, Gratwicke B.

Ecohealth. 2011 Dec;8(4):501-6. doi: 10.1007/s10393-012-0743-0. Epub 2012 Feb 11.

PMID:
22328095
12.

Bicephalic amphiphile architecture affects antibacterial activity.

LaDow JE, Warnock DC, Hamill KM, Simmons KL, Davis RW, Schwantes CR, Flaherty DC, Willcox JA, Wilson-Henjum K, Caran KL, Minbiole KP, Seifert K.

Eur J Med Chem. 2011 Sep;46(9):4219-26. doi: 10.1016/j.ejmech.2011.06.026. Epub 2011 Jun 25.

PMID:
21794958
13.

The bacterially produced metabolite violacein is associated with survival of amphibians infected with a lethal fungus.

Becker MH, Brucker RM, Schwantes CR, Harris RN, Minbiole KP.

Appl Environ Microbiol. 2009 Nov;75(21):6635-8. doi: 10.1128/AEM.01294-09. Epub 2009 Aug 28.

14.

Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus.

Harris RN, Brucker RM, Walke JB, Becker MH, Schwantes CR, Flaherty DC, Lam BA, Woodhams DC, Briggs CJ, Vredenburg VT, Minbiole KP.

ISME J. 2009 Jul;3(7):818-24. doi: 10.1038/ismej.2009.27. Epub 2009 Mar 26.

PMID:
19322245
15.

Amphibian chemical defense: antifungal metabolites of the microsymbiont Janthinobacterium lividum on the salamander Plethodon cinereus.

Brucker RM, Harris RN, Schwantes CR, Gallaher TN, Flaherty DC, Lam BA, Minbiole KP.

J Chem Ecol. 2008 Nov;34(11):1422-9. doi: 10.1007/s10886-008-9555-7. Epub 2008 Oct 24.

PMID:
18949519

Supplemental Content

Loading ...
Support Center