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Items: 26

1.

Optimized ChIP-seq method facilitates transcription factor profiling in human tumors.

Singh AA, Schuurman K, Nevedomskaya E, Stelloo S, Linder S, Droog M, Kim Y, Sanders J, van der Poel H, Bergman AM, Wessels LF, Zwart W.

Life Sci Alliance. 2018 Dec 28;2(1):e201800115. doi: 10.26508/lsa.201800115. eCollection 2019 Feb.

2.

Integrative epigenetic taxonomy of primary prostate cancer.

Stelloo S, Nevedomskaya E, Kim Y, Schuurman K, Valle-Encinas E, Lobo J, Krijgsman O, Peeper DS, Chang SL, Feng FY, Wessels LFA, Henrique R, Jerónimo C, Bergman AM, Zwart W.

Nat Commun. 2018 Nov 21;9(1):4900. doi: 10.1038/s41467-018-07270-2.

3.

FOXA1 levels are decreased in pleural breast cancer metastases after adjuvant endocrine therapy, and this is associated with poor outcome.

Schrijver W, Schuurman K, van Rossum A, Droog M, Jeronimo C, Salta S, Henrique R, Wesseling J, Moelans C, Linn SC, van den Heuvel M, van Diest P, Zwart W.

Mol Oncol. 2018 Nov;12(11):1884-1894. doi: 10.1002/1878-0261.12353. Epub 2018 Oct 12.

4.

Characterizing steroid hormone receptor chromatin binding landscapes in male and female breast cancer.

Severson TM, Kim Y, Joosten SEP, Schuurman K, van der Groep P, Moelans CB, Ter Hoeve ND, Manson QF, Martens JW, van Deurzen CHM, Barbe E, Hedenfalk I, Bult P, Smit VTHBM, Linn SC, van Diest PJ, Wessels L, Zwart W.

Nat Commun. 2018 Feb 2;9(1):482. doi: 10.1038/s41467-018-02856-2.

5.

Gene Expression Profiling of Multiple Sclerosis Pathology Identifies Early Patterns of Demyelination Surrounding Chronic Active Lesions.

Hendrickx DAE, van Scheppingen J, van der Poel M, Bossers K, Schuurman KG, van Eden CG, Hol EM, Hamann J, Huitinga I.

Front Immunol. 2017 Dec 21;8:1810. doi: 10.3389/fimmu.2017.01810. eCollection 2017.

6.

Loss of steroid hormone receptors is common in malignant pleural and peritoneal effusions of breast cancer patients treated with endocrine therapy.

Schrijver WAME, Schuurman K, van Rossum A; Dutch Distant Breast Cancer Metastases Consortium, Peeters T, Ter Hoeve N, Zwart W, van Diest PJ, Moelans CB.

Oncotarget. 2017 Feb 20;8(33):55550-55561. doi: 10.18632/oncotarget.15548. eCollection 2017 Aug 15.

7.

Staining of HLA-DR, Iba1 and CD68 in human microglia reveals partially overlapping expression depending on cellular morphology and pathology.

Hendrickx DAE, van Eden CG, Schuurman KG, Hamann J, Huitinga I.

J Neuroimmunol. 2017 Aug 15;309:12-22. doi: 10.1016/j.jneuroim.2017.04.007. Epub 2017 Apr 20.

PMID:
28601280
8.

Proteasome Activation by Small Molecules.

Leestemaker Y, de Jong A, Witting KF, Penning R, Schuurman K, Rodenko B, Zaal EA, van de Kooij B, Laufer S, Heck AJR, Borst J, Scheper W, Berkers CR, Ovaa H.

Cell Chem Biol. 2017 Jun 22;24(6):725-736.e7. doi: 10.1016/j.chembiol.2017.05.010. Epub 2017 May 25.

9.

Isolation of primary microglia from the human post-mortem brain: effects of ante- and post-mortem variables.

Mizee MR, Miedema SS, van der Poel M, Adelia, Schuurman KG, van Strien ME, Melief J, Smolders J, Hendrickx DA, Heutinck KM, Hamann J, Huitinga I.

Acta Neuropathol Commun. 2017 Feb 17;5(1):16. doi: 10.1186/s40478-017-0418-8.

10.

Comparative Cistromics Reveals Genomic Cross-talk between FOXA1 and ERα in Tamoxifen-Associated Endometrial Carcinomas.

Droog M, Nevedomskaya E, Kim Y, Severson T, Flach KD, Opdam M, Schuurman K, Gradowska P, Hauptmann M, Dackus G, Hollema H, Mourits M, Nederlof P, van Boven H, Linn SC, Wessels L, van Leeuwen FE, Zwart W.

Cancer Res. 2016 Jul 1;76(13):3773-84. doi: 10.1158/0008-5472.CAN-14-1813. Epub 2016 May 6. Erratum in: Cancer Res. 2018 May 1;78(9):2446.

11.

Definition of Proteasomal Peptide Splicing Rules for High-Efficiency Spliced Peptide Presentation by MHC Class I Molecules.

Berkers CR, de Jong A, Schuurman KG, Linnemann C, Meiring HD, Janssen L, Neefjes JJ, Schumacher TN, Rodenko B, Ovaa H.

J Immunol. 2015 Nov 1;195(9):4085-95. doi: 10.4049/jimmunol.1402455. Epub 2015 Sep 23.

12.

Peptide Splicing in the Proteasome Creates a Novel Type of Antigen with an Isopeptide Linkage.

Berkers CR, de Jong A, Schuurman KG, Linnemann C, Geenevasen JA, Schumacher TN, Rodenko B, Ovaa H.

J Immunol. 2015 Nov 1;195(9):4075-84. doi: 10.4049/jimmunol.1402454. Epub 2015 Sep 23.

13.

Comparison of three magnetic nanoparticle tracers for sentinel lymph node biopsy in an in vivo porcine model.

Pouw JJ, Ahmed M, Anninga B, Schuurman K, Pinder SE, Van Hemelrijck M, Pankhurst QA, Douek M, Ten Haken B.

Int J Nanomedicine. 2015 Feb 11;10:1235-43. doi: 10.2147/IJN.S76962. eCollection 2015.

14.

Enhanced uptake of multiple sclerosis-derived myelin by THP-1 macrophages and primary human microglia.

Hendrickx DA, Schuurman KG, van Draanen M, Hamann J, Huitinga I.

J Neuroinflammation. 2014 Mar 31;11:64. doi: 10.1186/1742-2094-11-64.

15.

Gender differences in multiple sclerosis: induction of estrogen signaling in male and progesterone signaling in female lesions.

Luchetti S, van Eden CG, Schuurman K, van Strien ME, Swaab DF, Huitinga I.

J Neuropathol Exp Neurol. 2014 Feb;73(2):123-35. doi: 10.1097/NEN.0000000000000037.

PMID:
24423637
16.

Microglia in normal appearing white matter of multiple sclerosis are alerted but immunosuppressed.

Melief J, Schuurman KG, van de Garde MD, Smolders J, van Eijk M, Hamann J, Huitinga I.

Glia. 2013 Nov;61(11):1848-61. doi: 10.1002/glia.22562. Epub 2013 Sep 6.

PMID:
24014207
17.

Characteristics of differentiated CD8(+) and CD4 (+) T cells present in the human brain.

Smolders J, Remmerswaal EB, Schuurman KG, Melief J, van Eden CG, van Lier RA, Huitinga I, Hamann J.

Acta Neuropathol. 2013 Oct;126(4):525-35. doi: 10.1007/s00401-013-1155-0. Epub 2013 Jul 24.

PMID:
23880787
18.

Selective upregulation of scavenger receptors in and around demyelinating areas in multiple sclerosis.

Hendrickx DA, Koning N, Schuurman KG, van Strien ME, van Eden CG, Hamann J, Huitinga I.

J Neuropathol Exp Neurol. 2013 Feb;72(2):106-18. doi: 10.1097/NEN.0b013e31827fd9e8.

PMID:
23334594
19.

Expression of vitamin D receptor and metabolizing enzymes in multiple sclerosis-affected brain tissue.

Smolders J, Schuurman KG, van Strien ME, Melief J, Hendrickx D, Hol EM, van Eden C, Luchetti S, Huitinga I.

J Neuropathol Exp Neurol. 2013 Feb;72(2):91-105. doi: 10.1097/NEN.0b013e31827f4fcc.

PMID:
23334593
20.

Phenotyping primary human microglia: tight regulation of LPS responsiveness.

Melief J, Koning N, Schuurman KG, Van De Garde MD, Smolders J, Hoek RM, Van Eijk M, Hamann J, Huitinga I.

Glia. 2012 Oct;60(10):1506-17. doi: 10.1002/glia.22370. Epub 2012 Jun 27.

PMID:
22740309
21.

Probing the specificity and activity profiles of the proteasome inhibitors bortezomib and delanzomib.

Berkers CR, Leestemaker Y, Schuurman KG, Ruggeri B, Jones-Bolin S, Williams M, Ovaa H.

Mol Pharm. 2012 May 7;9(5):1126-35. doi: 10.1021/mp2004143. Epub 2012 Apr 16.

PMID:
22432738
22.

Fluorescence-based proteasome activity profiling.

de Jong A, Schuurman KG, Rodenko B, Ovaa H, Berkers CR.

Methods Mol Biol. 2012;803:183-204. doi: 10.1007/978-1-61779-364-6_13.

PMID:
22065226
23.

Quantifying cross-tissue diversity in proteasome complexes by mass spectrometry.

Pelletier S, Schuurman KG, Berkers CR, Ovaa H, Heck AJ, Raijmakers R.

Mol Biosyst. 2010 Aug;6(8):1450-3. doi: 10.1039/c004989a. Epub 2010 May 24.

PMID:
20498902
24.

Boronic acid-based inhibitor of autotaxin reveals rapid turnover of LPA in the circulation.

Albers HM, Dong A, van Meeteren LA, Egan DA, Sunkara M, van Tilburg EW, Schuurman K, van Tellingen O, Morris AJ, Smyth SS, Moolenaar WH, Ovaa H.

Proc Natl Acad Sci U S A. 2010 Apr 20;107(16):7257-62. doi: 10.1073/pnas.1001529107. Epub 2010 Apr 1.

25.

Dose-dependent inhibition of proteasome activity by a mutant ubiquitin associated with neurodegenerative disease.

van Tijn P, de Vrij FM, Schuurman KG, Dantuma NP, Fischer DF, van Leeuwen FW, Hol EM.

J Cell Sci. 2007 May 1;120(Pt 9):1615-23. Epub 2007 Apr 3.

26.

A cannabinoid mechanism in relapse to cocaine seeking.

De Vries TJ, Shaham Y, Homberg JR, Crombag H, Schuurman K, Dieben J, Vanderschuren LJ, Schoffelmeer AN.

Nat Med. 2001 Oct;7(10):1151-4.

PMID:
11590440

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