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Items: 40

1.

Genomic investigation of Staphylococcus aureus recovered from Gambian women and newborns following an oral dose of intra-partum azithromycin.

Bojang A, Baines SL, Donovan L, Guerillot R, Stevens K, Higgs C, Bottomley C, Secka O, Schultz MB, Gonçalves da Silva A, Seemann T, Stinear TP, Roca A, Howden BP.

J Antimicrob Chemother. 2019 Aug 19. pii: dkz341. doi: 10.1093/jac/dkz341. [Epub ahead of print]

PMID:
31424550
2.

Corrigendum: Five decades of genome evolution in the globally distributed, extensively antibiotic-resistant Acinetobacter baumannii global clone 1.

Holt KE, Kenyon JJ, Hamidian M, Schultz MB, Pickard DJ, Dougan G, Hall RM.

Microb Genom. 2019 Jul;5(7). doi: 10.1099/mgen.0.000280. No abstract available.

3.

Molecular and Cellular Characterization of SIRT1 Allosteric Activators.

Schultz MB, Rinaldi C, Lu Y, Amorim JA, Sinclair DA.

Methods Mol Biol. 2019;1983:133-149. doi: 10.1007/978-1-4939-9434-2_8.

PMID:
31087296
4.

Impairment of an Endothelial NAD+-H2S Signaling Network Is a Reversible Cause of Vascular Aging.

Das A, Huang GX, Bonkowski MS, Longchamp A, Li C, Schultz MB, Kim LJ, Osborne B, Joshi S, Lu Y, Treviño-Villarreal JH, Kang MJ, Hung TT, Lee B, Williams EO, Igarashi M, Mitchell JR, Wu LE, Turner N, Arany Z, Guarente L, Sinclair DA.

Cell. 2019 Feb 7;176(4):944-945. doi: 10.1016/j.cell.2019.01.026. No abstract available.

5.

Reconstruction of the Genomes of Drug-Resistant Pathogens for Outbreak Investigation through Metagenomic Sequencing.

Mu A, Kwong JC, Isles NS, Gonçalves da Silva A, Schultz MB, Ballard SA, Lane CR, Carter GP, Williamson DA, Seemann T, Stinear TP, Howden BP.

mSphere. 2019 Jan 16;4(1). pii: e00529-18. doi: 10.1128/mSphere.00529-18.

6.

Conceptual Congruence in Mindfulness-Based Weight Loss Intervention Studies.

Schultz MB.

Mindfulness (N Y). 2018 Aug;9(4):1028-1036. doi: 10.1007/s12671-017-0860-5. Epub 2017 Nov 25.

7.

The changing landscape of vancomycin-resistant Enterococcus faecium in Australia: a population-level genomic study.

Lee RS, Gonçalves da Silva A, Baines SL, Strachan J, Ballard S, Carter GP, Kwong JC, Schultz MB, Bulach DM, Seemann T, Stinear TP, Howden BP.

J Antimicrob Chemother. 2018 Dec 1;73(12):3268-3278. doi: 10.1093/jac/dky331.

PMID:
30189014
8.

Comprehensive antibiotic-linked mutation assessment by resistance mutation sequencing (RM-seq).

Guérillot R, Li L, Baines S, Howden B, Schultz MB, Seemann T, Monk I, Pidot SJ, Gao W, Giulieri S, Gonçalves da Silva A, D'Agata A, Tomita T, Peleg AY, Stinear TP, Howden BP.

Genome Med. 2018 Aug 31;10(1):63. doi: 10.1186/s13073-018-0572-z.

9.

Assays for NAD+-Dependent Reactions and NAD+ Metabolites.

Schultz MB, Lu Y, Braidy N, Sinclair DA.

Methods Mol Biol. 2018;1813:77-90. doi: 10.1007/978-1-4939-8588-3_6.

10.

Impairment of an Endothelial NAD+-H2S Signaling Network Is a Reversible Cause of Vascular Aging.

Das A, Huang GX, Bonkowski MS, Longchamp A, Li C, Schultz MB, Kim LJ, Osborne B, Joshi S, Lu Y, Treviño-Villarreal JH, Kang MJ, Hung TT, Lee B, Williams EO, Igarashi M, Mitchell JR, Wu LE, Turner N, Arany Z, Guarente L, Sinclair DA.

Cell. 2018 Mar 22;173(1):74-89.e20. doi: 10.1016/j.cell.2018.02.008. Erratum in: Cell. 2019 Feb 7;176(4):944-945.

11.

Mobile phones and computer keyboards: unlikely reservoirs of multidrug-resistant organisms in the tertiary intensive care unit.

Smibert OC, Aung AK, Woolnough E, Carter GP, Schultz MB, Howden BP, Seemann T, Spelman D, McGloughlin S, Peleg AY.

J Hosp Infect. 2018 Jul;99(3):295-298. doi: 10.1016/j.jhin.2018.02.013. Epub 2018 Mar 2.

PMID:
29501730
12.

Translating genomics into practice for real-time surveillance and response to carbapenemase-producing Enterobacteriaceae: evidence from a complex multi-institutional KPC outbreak.

Kwong JC, Lane CR, Romanes F, Gonçalves da Silva A, Easton M, Cronin K, Waters MJ, Tomita T, Stevens K, Schultz MB, Baines SL, Sherry NL, Carter GP, Mu A, Sait M, Ballard SA, Seemann T, Stinear TP, Howden BP.

PeerJ. 2018 Jan 3;6:e4210. doi: 10.7717/peerj.4210. eCollection 2018.

13.

Topical Antibiotic Use Coselects for the Carriage of Mobile Genetic Elements Conferring Resistance to Unrelated Antimicrobials in Staphylococcus aureus.

Carter GP, Schultz MB, Baines SL, Gonçalves da Silva A, Heffernan H, Tiong A, Pham PH, Monk IR, Stinear TP, Howden BP, Williamson DA.

Antimicrob Agents Chemother. 2018 Jan 25;62(2). pii: e02000-17. doi: 10.1128/AAC.02000-17. Print 2018 Feb.

14.

Donor-Derived Mycoplasma hominis and an Apparent Cluster of M. hominis Cases in Solid Organ Transplant Recipients.

Smibert OC, Wilson HL, Sohail A, Narayanasamy S, Schultz MB, Ballard SA, Kwong JC, de Boer J, Morrissey CO, Peleg AY, Snell GI, Paraskeva MA, Jenney AWJ.

Clin Infect Dis. 2017 Oct 16;65(9):1504-1508. doi: 10.1093/cid/cix601.

PMID:
29048510
15.

More evolution underground: Accelerated mitochondrial substitution rate in Australian burrowing freshwater crayfishes (Decapoda: Parastacidae).

Gan HM, Tan MH, Lee YP, Schultz MB, Horwitz P, Burnham Q, Austin CM.

Mol Phylogenet Evol. 2018 Jan;118:88-98. doi: 10.1016/j.ympev.2017.09.022. Epub 2017 Sep 28.

PMID:
28966124
16.

A Supervised Statistical Learning Approach for Accurate Legionella pneumophila Source Attribution during Outbreaks.

Buultjens AH, Chua KYL, Baines SL, Kwong J, Gao W, Cutcher Z, Adcock S, Ballard S, Schultz MB, Tomita T, Subasinghe N, Carter GP, Pidot SJ, Franklin L, Seemann T, Gonçalves Da Silva A, Howden BP, Stinear TP.

Appl Environ Microbiol. 2017 Oct 17;83(21). pii: e01482-17. doi: 10.1128/AEM.01482-17. Print 2017 Nov 1.

17.

Retrotransposons Are the Major Contributors to the Expansion of the Drosophila ananassae Muller F Element.

Leung W, Shaffer CD, Chen EJ, Quisenberry TJ, Ko K, Braverman JM, Giarla TC, Mortimer NT, Reed LK, Smith ST, Robic S, McCartha SR, Perry DR, Prescod LM, Sheppard ZA, Saville KJ, McClish A, Morlock EA, Sochor VR, Stanton B, Veysey-White IC, Revie D, Jimenez LA, Palomino JJ, Patao MD, Patao SM, Himelblau ET, Campbell JD, Hertz AL, McEvilly MF, Wagner AR, Youngblom J, Bedi B, Bettincourt J, Duso E, Her M, Hilton W, House S, Karimi M, Kumimoto K, Lee R, Lopez D, Odisho G, Prasad R, Robbins HL, Sandhu T, Selfridge T, Tsukashima K, Yosif H, Kokan NP, Britt L, Zoellner A, Spana EP, Chlebina BT, Chong I, Friedman H, Mammo DA, Ng CL, Nikam VS, Schwartz NU, Xu TQ, Burg MG, Batten SM, Corbeill LM, Enoch E, Ensign JJ, Franks ME, Haiker B, Ingles JA, Kirkland LD, Lorenz-Guertin JM, Matthews J, Mittig CM, Monsma N, Olson KJ, Perez-Aragon G, Ramic A, Ramirez JR, Scheiber C, Schneider PA, Schultz DE, Simon M, Spencer E, Wernette AC, Wykle ME, Zavala-Arellano E, McDonald MJ, Ostby K, Wendland P, DiAngelo JR, Ceasrine AM, Cox AH, Docherty JEB, Gingras RM, Grieb SM, Pavia MJ, Personius CL, Polak GL, Beach DL, Cerritos HL, Horansky EA, Sharif KA, Moran R, Parrish S, Bickford K, Bland J, Broussard J, Campbell K, Deibel KE, Forka R, Lemke MC, Nelson MB, O'Keeffe C, Ramey SM, Schmidt L, Villegas P, Jones CJ, Christ SL, Mamari S, Rinaldi AS, Stity G, Hark AT, Scheuerman M, Silver Key SC, McRae BD, Haberman AS, Asinof S, Carrington H, Drumm K, Embry T, McGuire R, Miller-Foreman D, Rosen S, Safa N, Schultz D, Segal M, Shevin Y, Svoronos P, Vuong T, Skuse G, Paetkau DW, Bridgman RK, Brown CM, Carroll AR, Gifford FM, Gillespie JB, Herman SE, Holtcamp KL, Host MA, Hussey G, Kramer DM, Lawrence JQ, Martin MM, Niemiec EN, O'Reilly AP, Pahl OA, Quintana G, Rettie EAS, Richardson TL, Rodriguez AE, Rodriguez MO, Schiraldi L, Smith JJ, Sugrue KF, Suriano LJ, Takach KE, Vasquez AM, Velez X, Villafuerte EJ, Vives LT, Zellmer VR, Hauke J, Hauser CR, Barker K, Cannon L, Parsamian P, Parsons S, Wichman Z, Bazinet CW, Johnson DE, Bangura A, Black JA, Chevee V, Einsteen SA, Hilton SK, Kollmer M, Nadendla R, Stamm J, Fafara-Thompson AE, Gygi AM, Ogawa EE, Van Camp M, Kocsisova Z, Leatherman JL, Modahl CM, Rubin MR, Apiz-Saab SS, Arias-Mejias SM, Carrion-Ortiz CF, Claudio-Vazquez PN, Espada-Green DM, Feliciano-Camacho M, Gonzalez-Bonilla KM, Taboas-Arroyo M, Vargas-Franco D, Montañez-Gonzalez R, Perez-Otero J, Rivera-Burgos M, Rivera-Rosario FJ, Eisler HL, Alexander J, Begley SK, Gabbard D, Allen RJ, Aung WY, Barshop WD, Boozalis A, Chu VP, Davis JS, Duggal RN, Franklin R, Gavinski K, Gebreyesus H, Gong HZ, Greenstein RA, Guo AD, Hanson C, Homa KE, Hsu SC, Huang Y, Huo L, Jacobs S, Jia S, Jung KL, Wai-Chee Kong S, Kroll MR, Lee BM, Lee PF, Levine KM, Li AS, Liu C, Liu MM, Lousararian AP, Lowery PB, Mallya AP, Marcus JE, Ng PC, Nguyen HP, Patel R, Precht H, Rastogi S, Sarezky JM, Schefkind A, Schultz MB, Shen D, Skorupa T, Spies NC, Stancu G, Vivian Tsang HM, Turski AL, Venkat R, Waldman LE, Wang K, Wang T, Wei JW, Wu DY, Xiong DD, Yu J, Zhou K, McNeil GP, Fernandez RW, Menzies PG, Gu T, Buhler J, Mardis ER, Elgin SCR.

G3 (Bethesda). 2017 Aug 7;7(8):2439-2460. doi: 10.1534/g3.117.040907.

18.

Target-Specific Assay for Rapid and Quantitative Detection of Mycobacterium chimaera DNA.

Zozaya-Valdés E, Porter JL, Coventry J, Fyfe JAM, Carter GP, Gonçalves da Silva A, Schultz MB, Seemann T, Johnson PDR, Stewardson AJ, Bastian I, Roberts SA, Howden BP, Williamson DA, Stinear TP.

J Clin Microbiol. 2017 Jun;55(6):1847-1856. doi: 10.1128/JCM.00197-17. Epub 2017 Apr 5.

19.

Repeated local emergence of carbapenem-resistant Acinetobacter baumannii in a single hospital ward.

Schultz MB, Pham Thanh D, Tran Do Hoan N, Wick RR, Ingle DJ, Hawkey J, Edwards DJ, Kenyon JJ, Phu Huong Lan N, Campbell JI, Thwaites G, Thi Khanh Nhu N, Hall RM, Fournier-Level A, Baker S, Holt KE.

Microb Genom. 2016 Mar 2;2(3):e000050. doi: 10.1099/mgen.0.000050. eCollection 2016 Mar.

20.

Five decades of genome evolution in the globally distributed, extensively antibiotic-resistant Acinetobacter baumannii global clone 1.

Holt K, Kenyon JJ, Hamidian M, Schultz MB, Pickard DJ, Dougan G, Hall R.

Microb Genom. 2016 Feb 23;2(2):e000052. doi: 10.1099/mgen.0.000052. eCollection 2016 Feb. Erratum in: Microb Genom. 2019 Jul;5(7):.

21.

Genomic Insights into a Sustained National Outbreak of Yersinia pseudotuberculosis.

Williamson DA, Baines SL, Carter GP, da Silva AG, Ren X, Sherwood J, Dufour M, Schultz MB, French NP, Seemann T, Stinear TP, Howden BP.

Genome Biol Evol. 2016 Dec 1;8(12):3806-3814. doi: 10.1093/gbe/evw285.

22.

Comment on: Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data.

Kwong JC, Schultz MB, Williamson DA, Stinear TP, Seemann T, Howden BP.

J Antimicrob Chemother. 2017 Feb;72(2):635-636. doi: 10.1093/jac/dkw473. Epub 2016 Dec 20. No abstract available.

PMID:
27999008
23.

Microbial mercury methylation in Antarctic sea ice.

Gionfriddo CM, Tate MT, Wick RR, Schultz MB, Zemla A, Thelen MP, Schofield R, Krabbenhoft DP, Holt KE, Moreau JW.

Nat Microbiol. 2016 Aug 1;1(10):16127. doi: 10.1038/nmicrobiol.2016.127.

PMID:
27670112
24.

Why NAD(+) Declines during Aging: It's Destroyed.

Schultz MB, Sinclair DA.

Cell Metab. 2016 Jun 14;23(6):965-966. doi: 10.1016/j.cmet.2016.05.022.

25.

When stem cells grow old: phenotypes and mechanisms of stem cell aging.

Schultz MB, Sinclair DA.

Development. 2016 Jan 1;143(1):3-14. doi: 10.1242/dev.130633. Review.

26.

Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health.

Holt KE, Wertheim H, Zadoks RN, Baker S, Whitehouse CA, Dance D, Jenney A, Connor TR, Hsu LY, Severin J, Brisse S, Cao H, Wilksch J, Gorrie C, Schultz MB, Edwards DJ, Nguyen KV, Nguyen TV, Dao TT, Mensink M, Minh VL, Nhu NT, Schultsz C, Kuntaman K, Newton PN, Moore CE, Strugnell RA, Thomson NR.

Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):E3574-81. doi: 10.1073/pnas.1501049112. Epub 2015 Jun 22.

27.

Bandage: interactive visualization of de novo genome assemblies.

Wick RR, Schultz MB, Zobel J, Holt KE.

Bioinformatics. 2015 Oct 15;31(20):3350-2. doi: 10.1093/bioinformatics/btv383. Epub 2015 Jun 22.

28.

Convergent adaptation in the dominant global hospital clone ST239 of methicillin-resistant Staphylococcus aureus.

Baines SL, Holt KE, Schultz MB, Seemann T, Howden BO, Jensen SO, van Hal SJ, Coombs GW, Firth N, Powell DR, Stinear TP, Howden BP.

MBio. 2015 Mar 3;6(2):e00080. doi: 10.1128/mBio.00080-15.

29.

MitoPhAST, a new automated mitogenomic phylogeny tool in the post-genomic era with a case study of 89 decapod mitogenomes including eight new freshwater crayfish mitogenomes.

Tan MH, Gan HM, Schultz MB, Austin CM.

Mol Phylogenet Evol. 2015 Apr;85:180-8. doi: 10.1016/j.ympev.2015.02.009. Epub 2015 Feb 23. Erratum in: Mol Phylogenet Evol. 2015 Jun;87(1):118.

PMID:
25721538
30.

Multiple drivers of decline in the global status of freshwater crayfish (Decapoda: Astacidea).

Richman NI, Böhm M, Adams SB, Alvarez F, Bergey EA, Bunn JJ, Burnham Q, Cordeiro J, Coughran J, Crandall KA, Dawkins KL, DiStefano RJ, Doran NE, Edsman L, Eversole AG, Füreder L, Furse JM, Gherardi F, Hamr P, Holdich DM, Horwitz P, Johnston K, Jones CM, Jones JP, Jones RL, Jones TG, Kawai T, Lawler S, López-Mejía M, Miller RM, Pedraza-Lara C, Reynolds JD, Richardson AM, Schultz MB, Schuster GA, Sibley PJ, Souty-Grosset C, Taylor CA, Thoma RF, Walls J, Walsh TS, Collen B.

Philos Trans R Soc Lond B Biol Sci. 2015 Feb 19;370(1662):20140060. doi: 10.1098/rstb.2014.0060.

31.

Phylogeography of var gene repertoires reveals fine-scale geospatial clustering of Plasmodium falciparum populations in a highly endemic area.

Tessema SK, Monk SL, Schultz MB, Tavul L, Reeder JC, Siba PM, Mueller I, Barry AE.

Mol Ecol. 2015 Jan;24(2):484-97. doi: 10.1111/mec.13033. Epub 2015 Jan 9.

PMID:
25482097
32.

SRST2: Rapid genomic surveillance for public health and hospital microbiology labs.

Inouye M, Dashnow H, Raven LA, Schultz MB, Pope BJ, Tomita T, Zobel J, Holt KE.

Genome Med. 2014 Nov 20;6(11):90. doi: 10.1186/s13073-014-0090-6. eCollection 2014.

33.

The complete mitogenome of the Australian crayfish Geocharax gracilis Clark 1936 (Crustacea: Decapoda: Parastacidae).

Gan HM, Tan MH, Gan HY, Lee YP, Schultz MB, Austin CM.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):826-7. doi: 10.3109/19401736.2014.919460. Epub 2014 May 20.

PMID:
24845437
34.

Nuclear and mitochondrial patterns of population structure in North Pacific false killer whales (Pseudorca crassidens).

Martien KK, Chivers SJ, Baird RW, Archer FI, Gorgone AM, Hancock-Hanser BL, Mattila D, McSweeney DJ, Oleson EM, Palmer C, Pease VL, Robertson KM, Schorr GS, Schultz MB, Webster DL, Taylor BL.

J Hered. 2014 Sep-Oct;105(5):611-26. doi: 10.1093/jhered/esu029. Epub 2014 May 14.

PMID:
24831238
35.

The complete mitogenome of the Australian land crayfish Engaeus lyelli (Clark 1936) (Crustacea: Decapoda: Parastacidae).

Gan HM, Tan MH, Lee YP, Schultz MB, Austin CM.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):595-6. doi: 10.3109/19401736.2014.908361. Epub 2014 Apr 14.

PMID:
24730605
36.

Distribution and diversity of soil microfauna from East Antarctica: assessing the link between biotic and abiotic factors.

Velasco-Castrillón A, Schultz MB, Colombo F, Gibson JA, Davies KA, Austin AD, Stevens MI.

PLoS One. 2014 Jan 31;9(1):e87529. doi: 10.1371/journal.pone.0087529. eCollection 2014.

38.

Phylogenetic analyses reveal extensive cryptic speciation and host specialization in an economically important mite taxon.

Miller AD, Skoracka A, Navia D, Mendonca RS, Szydło W, Schultz MB, Michael Smith C, Truol G, Hoffmann AA.

Mol Phylogenet Evol. 2013 Mar;66(3):928-40. doi: 10.1016/j.ympev.2012.11.021. Epub 2012 Dec 12.

PMID:
23246929
39.

Sea-level changes and palaeo-ranges: reconstruction of ancient shorelines and river drainages and the phylogeography of the Australian land crayfish Engaeus sericatus Clark (Decapoda: Parastacidae).

Schultz MB, Ierodiaconou DA, Smith SA, Horwitz P, Richardson AM, Crandall KA, Austin CM.

Mol Ecol. 2008 Dec;17(24):5291-314. doi: 10.1111/j.1365-294X.2008.03996.x.

PMID:
19120999
40.

Evolution underground: a molecular phylogenetic investigation of Australian burrowing freshwater crayfish (Decapoda: Parastacidae) with particular focus on Engaeus Erichson.

Schultz MB, Smith SA, Horwitz P, Richardson AM, Crandall KA, Austin CM.

Mol Phylogenet Evol. 2009 Mar;50(3):580-98. doi: 10.1016/j.ympev.2008.11.025. Epub 2008 Dec 11.

PMID:
19118635

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