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Items: 1 to 50 of 207

1.

How Substitutional Point Defects in Two-Dimensional WS2 Induce Charge Localization, Spin-Orbit Splitting, and Strain.

Schuler B, Lee JH, Kastl C, Cochrane KA, Chen CT, Refaely-Abramson S, Yuan S, van Veen E, Roldán R, Borys NJ, Koch RJ, Aloni S, Schwartzberg AM, Ogletree DF, Neaton JB, Weber-Bargioni A.

ACS Nano. 2019 Aug 19. doi: 10.1021/acsnano.9b04611. [Epub ahead of print]

PMID:
31393700
2.

Adaptive Method for Quantitative Estimation of Glucose and Fructose Concentrations in Aqueous Solutions Based on Infrared Nanoantenna Optics.

Schuler B, Kühner L, Hentschel M, Giessen H, Tarín C.

Sensors (Basel). 2019 Jul 11;19(14). pii: E3053. doi: 10.3390/s19143053.

3.

Identifying substitutional oxygen as a prolific point defect in monolayer transition metal dichalcogenides.

Barja S, Refaely-Abramson S, Schuler B, Qiu DY, Pulkin A, Wickenburg S, Ryu H, Ugeda MM, Kastl C, Chen C, Hwang C, Schwartzberg A, Aloni S, Mo SK, Frank Ogletree D, Crommie MF, Yazyev OV, Louie SG, Neaton JB, Weber-Bargioni A.

Nat Commun. 2019 Jul 29;10(1):3382. doi: 10.1038/s41467-019-11342-2.

4.

Building Blocks for Healthy Children: Evaluation of a Child Care Center-Based Obesity Prevention Pilot Among Low-Income Children.

Schuler BR, Fowler B, Rubio D, Kilby S, Wang Y, Hager ER, Black MM.

J Nutr Educ Behav. 2019 Jun 19. pii: S1499-4046(19)30195-2. doi: 10.1016/j.jneb.2019.04.017. [Epub ahead of print]

PMID:
31229396
5.

Disordered RNA chaperones can enhance nucleic acid folding via local charge screening.

Holmstrom ED, Liu Z, Nettels D, Best RB, Schuler B.

Nat Commun. 2019 Jun 5;10(1):2453. doi: 10.1038/s41467-019-10356-0.

6.

Tribute to William A. Eaton.

Schuler B, Szabo A, Wolynes PG.

J Phys Chem B. 2018 Dec 13;122(49):10971-10973. doi: 10.1021/acs.jpcb.8b08745. No abstract available.

PMID:
30986080
7.

Accurate Transfer Efficiencies, Distance Distributions, and Ensembles of Unfolded and Intrinsically Disordered Proteins From Single-Molecule FRET.

Holmstrom ED, Holla A, Zheng W, Nettels D, Best RB, Schuler B.

Methods Enzymol. 2018;611:287-325. doi: 10.1016/bs.mie.2018.09.030. Epub 2018 Nov 16.

PMID:
30471690
8.

Transition path times of coupled folding and binding reveal the formation of an encounter complex.

Sturzenegger F, Zosel F, Holmstrom ED, Buholzer KJ, Makarov DE, Nettels D, Schuler B.

Nat Commun. 2018 Nov 9;9(1):4708. doi: 10.1038/s41467-018-07043-x.

9.

Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study.

Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Adariani SR, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J, Seidel CAM, Craggs TD, Hugel T.

Nat Methods. 2018 Nov;15(11):984. doi: 10.1038/s41592-018-0193-x.

PMID:
30327572
10.

Dispersion Correction Alleviates Dye Stacking of Single-Stranded DNA and RNA in Simulations of Single-Molecule Fluorescence Experiments.

Grotz KK, Nueesch MF, Holmstrom ED, Heinz M, Stelzl LS, Schuler B, Hummer G.

J Phys Chem B. 2018 Dec 13;122(49):11626-11639. doi: 10.1021/acs.jpcb.8b07537. Epub 2018 Oct 17.

PMID:
30285443
11.

Origin of Internal Friction in Disordered Proteins Depends on Solvent Quality.

Zheng W, Hofmann H, Schuler B, Best RB.

J Phys Chem B. 2018 Dec 13;122(49):11478-11487. doi: 10.1021/acs.jpcb.8b07425. Epub 2018 Oct 2.

PMID:
30277791
12.

Local and Global Dynamics in Intrinsically Disordered Synuclein.

Rezaei-Ghaleh N, Parigi G, Soranno A, Holla A, Becker S, Schuler B, Luchinat C, Zweckstetter M.

Angew Chem Int Ed Engl. 2018 Nov 12;57(46):15262-15266. doi: 10.1002/anie.201808172. Epub 2018 Oct 18.

PMID:
30184304
13.

Charge Interactions Can Dominate Coupled Folding and Binding on the Ribosome.

Marino J, Buholzer KJ, Zosel F, Nettels D, Schuler B.

Biophys J. 2018 Sep 18;115(6):996-1006. doi: 10.1016/j.bpj.2018.07.037. Epub 2018 Aug 15.

PMID:
30173887
14.

Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study.

Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Rezaei Adariani S, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J, Seidel CAM, Craggs TD, Hugel T.

Nat Methods. 2018 Sep;15(9):669-676. doi: 10.1038/s41592-018-0085-0. Epub 2018 Aug 31. Erratum in: Nat Methods. 2018 Nov;15(11):984.

15.

Comment on "Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water".

Best RB, Zheng W, Borgia A, Buholzer K, Borgia MB, Hofmann H, Soranno A, Nettels D, Gast K, Grishaev A, Schuler B.

Science. 2018 Aug 31;361(6405). pii: eaar7101. doi: 10.1126/science.aar7101.

PMID:
30166459
16.

Mapping an Equilibrium Folding Intermediate of the Cytolytic Pore Toxin ClyA with Single-Molecule FRET.

Dingfelder F, Benke S, Nettels D, Schuler B.

J Phys Chem B. 2018 Dec 13;122(49):11251-11261. doi: 10.1021/acs.jpcb.8b07026. Epub 2018 Sep 12.

PMID:
30156409
17.

A proline switch explains kinetic heterogeneity in a coupled folding and binding reaction.

Zosel F, Mercadante D, Nettels D, Schuler B.

Nat Commun. 2018 Aug 20;9(1):3332. doi: 10.1038/s41467-018-05725-0.

19.

Atomic Force Microscopy Identifying Fuel Pyrolysis Products and Directing the Synthesis of Analytical Standards.

Fatayer S, Poddar NB, Quiroga S, Schulz F, Schuler B, Kalpathy SV, Meyer G, Pérez D, Guitián E, Peña D, Wornat MJ, Gross L.

J Am Chem Soc. 2018 Jul 5;140(26):8156-8161. doi: 10.1021/jacs.8b02525. Epub 2018 Jun 25.

PMID:
29893120
20.

Reorganization energy upon charging a single molecule on an insulator measured by atomic force microscopy.

Fatayer S, Schuler B, Steurer W, Scivetti I, Repp J, Gross L, Persson M, Meyer G.

Nat Nanotechnol. 2018 May;13(5):376-380. doi: 10.1038/s41565-018-0087-1. Epub 2018 Apr 16.

PMID:
29662243
21.

Inferring properties of disordered chains from FRET transfer efficiencies.

Zheng W, Zerze GH, Borgia A, Mittal J, Schuler B, Best RB.

J Chem Phys. 2018 Mar 28;148(12):123329. doi: 10.1063/1.5006954.

22.

Preface: Special Topic on Single-Molecule Biophysics.

Makarov DE, Schuler B.

J Chem Phys. 2018 Mar 28;148(12):123001. doi: 10.1063/1.5028275.

PMID:
29604869
23.

Simulation of FRET dyes allows quantitative comparison against experimental data.

Reinartz I, Sinner C, Nettels D, Stucki-Buchli B, Stockmar F, Panek PT, Jacob CR, Nienhaus GU, Schuler B, Schug A.

J Chem Phys. 2018 Mar 28;148(12):123321. doi: 10.1063/1.5010434.

24.

Atomic Force Microscopy for Molecular Structure Elucidation.

Gross L, Schuler B, Pavliček N, Fatayer S, Majzik Z, Moll N, Peña D, Meyer G.

Angew Chem Int Ed Engl. 2018 Apr 3;57(15):3888-3908. doi: 10.1002/anie.201703509. Epub 2018 Feb 27. Review.

PMID:
29485190
25.

Extreme disorder in an ultrahigh-affinity protein complex.

Borgia A, Borgia MB, Bugge K, Kissling VM, Heidarsson PO, Fernandes CB, Sottini A, Soranno A, Buholzer KJ, Nettels D, Kragelund BB, Best RB, Schuler B.

Nature. 2018 Mar 1;555(7694):61-66. doi: 10.1038/nature25762. Epub 2018 Feb 21.

26.

Structural basis of siRNA recognition by TRBP double-stranded RNA binding domains.

Masliah G, Maris C, König SL, Yulikov M, Aeschimann F, Malinowska AL, Mabille J, Weiler J, Holla A, Hunziker J, Meisner-Kober N, Schuler B, Jeschke G, Allain FH.

EMBO J. 2018 Mar 15;37(6). pii: e97089. doi: 10.15252/embj.201797089. Epub 2018 Feb 15.

27.

Barriers and Enablers to the Implementation of School Wellness Policies: An Economic Perspective.

Schuler BR, Saksvig BI, Nduka J, Beckerman S, Jaspers L, Black MM, Hager ER.

Health Promot Pract. 2018 Nov;19(6):873-883. doi: 10.1177/1524839917752109. Epub 2018 Jan 18.

28.

The Three-Fold Axis of the HIV-1 Capsid Lattice Is the Species-Specific Binding Interface for TRIM5α.

Morger D, Zosel F, Bühlmann M, Züger S, Mittelviefhaus M, Schuler B, Luban J, Grütter MG.

J Virol. 2018 Feb 12;92(5). pii: e01541-17. doi: 10.1128/JVI.01541-17. Print 2018 Mar 1.

29.

Combining short- and long-range fluorescence reporters with simulations to explore the intramolecular dynamics of an intrinsically disordered protein.

Zosel F, Haenni D, Soranno A, Nettels D, Schuler B.

J Chem Phys. 2017 Oct 21;147(15):152708. doi: 10.1063/1.4992800.

30.

Conformational Plasticity of Hepatitis C Virus Core Protein Enables RNA-Induced Formation of Nucleocapsid-like Particles.

Holmstrom ED, Nettels D, Schuler B.

J Mol Biol. 2018 Aug 3;430(16):2453-2467. doi: 10.1016/j.jmb.2017.10.010. Epub 2017 Oct 16.

31.

Curvature of designed armadillo repeat proteins allows modular peptide binding.

Hansen S, Ernst P, König SLB, Reichen C, Ewald C, Nettels D, Mittl PRE, Schuler B, Plückthun A.

J Struct Biol. 2018 Feb;201(2):108-117. doi: 10.1016/j.jsb.2017.08.009. Epub 2017 Aug 31.

32.

Child Development and the Community Environment: Understanding Overweight across the Income Gradient.

Schuler BR, O'Reilly N.

Child Obes. 2017 Dec;13(6):479-489. doi: 10.1089/chi.2017.0025. Epub 2017 Jul 31. Erratum in: Child Obes. 2018 Feb/Mar;14(2):139.

PMID:
28759255
33.

Structural Biology outside the box-inside the cell.

Plitzko JM, Schuler B, Selenko P.

Curr Opin Struct Biol. 2017 Oct;46:110-121. doi: 10.1016/j.sbi.2017.06.007. Epub 2017 Jul 21. Review.

PMID:
28735108
34.

Rapid Microfluidic Dilution for Single-Molecule Spectroscopy of Low-Affinity Biomolecular Complexes.

Zijlstra N, Dingfelder F, Wunderlich B, Zosel F, Benke S, Nettels D, Schuler B.

Angew Chem Int Ed Engl. 2017 Jun 12;56(25):7126-7129. doi: 10.1002/anie.201702439. Epub 2017 May 16.

PMID:
28510311
35.

Successful Application of Whole Genome Sequencing in a Medical Genetics Clinic.

Bick D, Fraser PC, Gutzeit MF, Harris JM, Hambuch TM, Helbling DC, Jacob HJ, Kersten JN, Leuthner SR, May T, North PE, Prisco SZ, Schuler BA, Shimoyama M, Strong KA, Van Why SK, Veith R, Verbsky J, Weborg AM Jr, Wilk BM, Willoughby RE Jr, Worthey EA, Dimmock DP.

J Pediatr Genet. 2017 Jun;6(2):61-76. doi: 10.1055/s-0036-1593968. Epub 2016 Nov 28.

36.

Characterizing aliphatic moieties in hydrocarbons with atomic force microscopy.

Schuler B, Zhang Y, Collazos S, Fatayer S, Meyer G, Pérez D, Guitián E, Harper MR, Kushnerick JD, Peña D, Gross L.

Chem Sci. 2017 Mar 1;8(3):2315-2320. doi: 10.1039/c6sc04698c. Epub 2016 Dec 12.

37.

Rapid Microfluidic Double-Jump Mixing Device for Single-Molecule Spectroscopy.

Dingfelder F, Wunderlich B, Benke S, Zosel F, Zijlstra N, Nettels D, Schuler B.

J Am Chem Soc. 2017 May 3;139(17):6062-6065. doi: 10.1021/jacs.7b02357. Epub 2017 Apr 19.

PMID:
28394601
38.

Single-molecule electrometry.

Ruggeri F, Zosel F, Mutter N, Różycka M, Wojtas M, Ożyhar A, Schuler B, Krishnan M.

Nat Nanotechnol. 2017 May;12(5):488-495. doi: 10.1038/nnano.2017.26. Epub 2017 Mar 13.

PMID:
28288117
39.

Integrated view of internal friction in unfolded proteins from single-molecule FRET, contact quenching, theory, and simulations.

Soranno A, Holla A, Dingfelder F, Nettels D, Makarov DE, Schuler B.

Proc Natl Acad Sci U S A. 2017 Mar 7;114(10):E1833-E1839. doi: 10.1073/pnas.1616672114. Epub 2017 Feb 21.

40.

Quantifying kinetics from time series of single-molecule Förster resonance energy transfer efficiency histograms.

Benke S, Nettels D, Hofmann H, Schuler B.

Nanotechnology. 2017 Mar 17;28(11):114002. doi: 10.1088/1361-6528/aa5abd. Epub 2017 Jan 19.

PMID:
28103588
41.

Probing the Action of Chemical Denaturant on an Intrinsically Disordered Protein by Simulation and Experiment.

Zheng W, Borgia A, Buholzer K, Grishaev A, Schuler B, Best RB.

J Am Chem Soc. 2016 Sep 14;138(36):11702-13. doi: 10.1021/jacs.6b05443. Epub 2016 Sep 1.

42.

Consistent View of Polypeptide Chain Expansion in Chemical Denaturants from Multiple Experimental Methods.

Borgia A, Zheng W, Buholzer K, Borgia MB, Schüler A, Hofmann H, Soranno A, Nettels D, Gast K, Grishaev A, Best RB, Schuler B.

J Am Chem Soc. 2016 Sep 14;138(36):11714-26. doi: 10.1021/jacs.6b05917. Epub 2016 Sep 1.

43.

Comprehensive structural and dynamical view of an unfolded protein from the combination of single-molecule FRET, NMR, and SAXS.

Aznauryan M, Delgado L, Soranno A, Nettels D, Huang JR, Labhardt AM, Grzesiek S, Schuler B.

Proc Natl Acad Sci U S A. 2016 Sep 13;113(37):E5389-98. doi: 10.1073/pnas.1607193113. Epub 2016 Aug 26.

44.

Single-Molecule FRET Spectroscopy and the Polymer Physics of Unfolded and Intrinsically Disordered Proteins.

Schuler B, Soranno A, Hofmann H, Nettels D.

Annu Rev Biophys. 2016 Jul 5;45:207-31. doi: 10.1146/annurev-biophys-062215-010915. Epub 2016 May 2. Review.

PMID:
27145874
45.

Identical Binding Energies and Work Functions for Distinct Adsorption Structures: Olympicenes on the Cu(111) Surface.

Liu W, Schuler B, Xu Y, Moll N, Meyer G, Gross L, Tkatchenko A.

J Phys Chem Lett. 2016 Mar 17;7(6):1022-7. doi: 10.1021/acs.jpclett.6b00223. Epub 2016 Mar 7.

PMID:
26928143
46.

Reversible Bergman cyclization by atomic manipulation.

Schuler B, Fatayer S, Mohn F, Moll N, Pavliček N, Meyer G, Peña D, Gross L.

Nat Chem. 2016 Mar;8(3):220-4. doi: 10.1038/nchem.2438. Epub 2016 Jan 25.

PMID:
26892552
47.

The Electric Field of CO Tips and Its Relevance for Atomic Force Microscopy.

Ellner M, Pavliček N, Pou P, Schuler B, Moll N, Meyer G, Gross L, Peréz R.

Nano Lett. 2016 Mar 9;16(3):1974-80. doi: 10.1021/acs.nanolett.5b05251. Epub 2016 Feb 16.

PMID:
26840626
48.

Erratum: The assembly dynamics of the cytolytic pore toxin ClyA.

Benke S, Roderer D, Wunderlich B, Nettels D, Glockshuber R, Schuler B.

Nat Commun. 2016 Feb 1;7:10650. doi: 10.1038/ncomms10650. No abstract available.

49.

Soluble Oligomers of the Pore-forming Toxin Cytolysin A from Escherichia coli Are Off-pathway Products of Pore Assembly.

Roderer D, Benke S, Schuler B, Glockshuber R.

J Biol Chem. 2016 Mar 11;291(11):5652-63. doi: 10.1074/jbc.M115.700757. Epub 2016 Jan 12.

50.

Excited-state annihilation reduces power dependence of single-molecule FRET experiments.

Nettels D, Haenni D, Maillot S, Gueye M, Barth A, Hirschfeld V, Hübner CG, Léonard J, Schuler B.

Phys Chem Chem Phys. 2015 Dec 28;17(48):32304-15. doi: 10.1039/c5cp05321h.

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