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Items: 1 to 50 of 121

1.

Protein Topology Prediction Algorithms Systematically Investigated in the Yeast Saccharomyces cerevisiae.

Weill U, Cohen N, Fadel A, Ben-Dor S, Schuldiner M.

Bioessays. 2019 Aug;41(8):e1800252. doi: 10.1002/bies.201800252. Epub 2019 Jul 11.

PMID:
31297843
2.

Disease-causing mutations in subunits of OXPHOS complex I affect certain physical interactions.

Barshad G, Zlotnikov-Poznianski N, Gal L, Schuldiner M, Mishmar D.

Sci Rep. 2019 Jul 10;9(1):9987. doi: 10.1038/s41598-019-46446-8.

3.

High-throughput ultrastructure screening using electron microscopy and fluorescent barcoding.

Bykov YS, Cohen N, Gabrielli N, Manenschijn H, Welsch S, Chlanda P, Kukulski W, Patil KR, Schuldiner M, Briggs JAG.

J Cell Biol. 2019 Jul 9. pii: jcb.201812081. doi: 10.1083/jcb.201812081. [Epub ahead of print]

PMID:
31289126
4.

Yeast ceramide synthases, Lag1 and Lac1, have distinct substrate specificity.

Megyeri M, Prasad R, Volpert G, Sliwa-Gonzalez A, Haribowo AG, Aguilera-Romero A, Riezman H, Barral Y, Futerman AH, Schuldiner M.

J Cell Sci. 2019 Jun 24;132(12). pii: jcs228411. doi: 10.1242/jcs.228411.

5.

The Endoplasmic Reticulum-Mitochondria Encounter Structure Complex Coordinates Coenzyme Q Biosynthesis.

Eisenberg-Bord M, Tsui HS, Antunes D, Fernández-Del-Río L, Bradley MC, Dunn CD, Nguyen TPT, Rapaport D, Clarke CF, Schuldiner M.

Contact (Thousand Oaks). 2019 Feb 22;2:2515256418825409. doi: 10.1177/2515256418825409.

6.

Promethin Is a Conserved Seipin Partner Protein.

Castro IG, Eisenberg-Bord M, Persiani E, Rochford JJ, Schuldiner M, Bohnert M.

Cells. 2019 Mar 21;8(3). pii: E268. doi: 10.3390/cells8030268.

7.

Coming together to define membrane contact sites.

Scorrano L, De Matteis MA, Emr S, Giordano F, Hajnóczky G, Kornmann B, Lackner LL, Levine TP, Pellegrini L, Reinisch K, Rizzuto R, Simmen T, Stenmark H, Ungermann C, Schuldiner M.

Nat Commun. 2019 Mar 20;10(1):1287. doi: 10.1038/s41467-019-09253-3. Review.

8.

Overexpression of branched-chain amino acid aminotransferases rescues the growth defects of cells lacking the Barth syndrome-related gene TAZ1.

Antunes D, Chowdhury A, Aich A, Saladi S, Harpaz N, Stahl M, Schuldiner M, Herrmann JM, Rehling P, Rapaport D.

J Mol Med (Berl). 2019 Feb;97(2):269-279. doi: 10.1007/s00109-018-1728-4. Epub 2019 Jan 3.

PMID:
30604168
9.

Author Correction: Genome-wide SWAp-Tag yeast libraries for proteome exploration.

Weill U, Yofe I, Sass E, Stynen B, Davidi D, Natarajan J, Ben-Menachem R, Avihou Z, Goldman O, Harpaz N, Chuartzman S, Kniazev K, Knoblach B, Laborenz J, Boos F, Kowarzyk J, Ben-Dor S, Zalckvar E, Herrmann JM, Rachubinski RA, Pines O, Rapaport D, Michnick SW, Levy ED, Schuldiner M.

Nat Methods. 2019 Feb;16(2):205. doi: 10.1038/s41592-018-0297-3.

PMID:
30602782
10.

Assessment of GFP Tag Position on Protein Localization and Growth Fitness in Yeast.

Weill U, Krieger G, Avihou Z, Milo R, Schuldiner M, Davidi D.

J Mol Biol. 2019 Feb 1;431(3):636-641. doi: 10.1016/j.jmb.2018.12.004. Epub 2018 Dec 12.

11.

Defining the Mammalian Peroxisomal Proteome.

Yifrach E, Fischer S, Oeljeklaus S, Schuldiner M, Zalckvar E, Warscheid B.

Subcell Biochem. 2018;89:47-66. doi: 10.1007/978-981-13-2233-4_2. Review.

PMID:
30378018
12.

YeastRGB: comparing the abundance and localization of yeast proteins across cells and libraries.

Dubreuil B, Sass E, Nadav Y, Heidenreich M, Georgeson JM, Weill U, Duan Y, Meurer M, Schuldiner M, Knop M, Levy ED.

Nucleic Acids Res. 2019 Jan 8;47(D1):D1245-D1249. doi: 10.1093/nar/gky941.

13.

An ER surface retrieval pathway safeguards the import of mitochondrial membrane proteins in yeast.

Hansen KG, Aviram N, Laborenz J, Bibi C, Meyer M, Spang A, Schuldiner M, Herrmann JM.

Science. 2018 Sep 14;361(6407):1118-1122. doi: 10.1126/science.aar8174.

PMID:
30213914
14.

Validation of a yeast malate dehydrogenase 2 (Mdh2) antibody tested for use in western blots.

Gabay-Maskit S, Schuldiner M, Zalckvar E.

Version 2. F1000Res. 2018 Jan 31 [revised 2018 Jan 1];7:130. doi: 10.12688/f1000research.13396.2. eCollection 2018.

15.

Natural genetic variation for expression of a SWEET transporter among wild species of Solanum lycopersicum (tomato) determines the hexose composition of ripening tomato fruit.

Shammai A, Petreikov M, Yeselson Y, Faigenboim A, Moy-Komemi M, Cohen S, Cohen D, Besaulov E, Efrati A, Houminer N, Bar M, Ast T, Schuldiner M, Klemens PAW, Neuhaus E, Baxter CJ, Rickett D, Bonnet J, White R, Giovannoni JJ, Levin I, Schaffer A.

Plant J. 2018 Oct;96(2):343-357. doi: 10.1111/tpj.14035. Epub 2018 Sep 1.

PMID:
30044900
16.

Genome-wide SWAp-Tag yeast libraries for proteome exploration.

Weill U, Yofe I, Sass E, Stynen B, Davidi D, Natarajan J, Ben-Menachem R, Avihou Z, Goldman O, Harpaz N, Chuartzman S, Kniazev K, Knoblach B, Laborenz J, Boos F, Kowarzyk J, Ben-Dor S, Zalckvar E, Herrmann JM, Rachubinski RA, Pines O, Rapaport D, Michnick SW, Levy ED, Schuldiner M.

Nat Methods. 2018 Aug;15(8):617-622. doi: 10.1038/s41592-018-0044-9. Epub 2018 Jul 9. Erratum in: Nat Methods. 2019 Feb;16(2):205.

17.

Temporal profiling of redox-dependent heterogeneity in single cells.

Radzinski M, Fassler R, Yogev O, Breuer W, Shai N, Gutin J, Ilyas S, Geffen Y, Tsytkin-Kirschenzweig S, Nahmias Y, Ravid T, Friedman N, Schuldiner M, Reichmann D.

Elife. 2018 Jun 5;7. pii: e37623. doi: 10.7554/eLife.37623.

18.

Stepping outside the comfort zone of membrane contact site research.

Bohnert M, Schuldiner M.

Nat Rev Mol Cell Biol. 2018 Aug;19(8):483-484. doi: 10.1038/s41580-018-0022-1. No abstract available.

19.

Systematic mapping of contact sites reveals tethers and a function for the peroxisome-mitochondria contact.

Shai N, Yifrach E, van Roermund CWT, Cohen N, Bibi C, IJlst L, Cavellini L, Meurisse J, Schuster R, Zada L, Mari MC, Reggiori FM, Hughes AL, Escobar-Henriques M, Cohen MM, Waterham HR, Wanders RJA, Schuldiner M, Zalckvar E.

Nat Commun. 2018 May 2;9(1):1761. doi: 10.1038/s41467-018-03957-8.

20.

The GET pathway can increase the risk of mitochondrial outer membrane proteins to be mistargeted to the ER.

Vitali DG, Sinzel M, Bulthuis EP, Kolb A, Zabel S, Mehlhorn DG, Figueiredo Costa B, Farkas Á, Clancy A, Schuldiner M, Grefen C, Schwappach B, Borgese N, Rapaport D.

J Cell Sci. 2018 May 16;131(10). pii: jcs211110. doi: 10.1242/jcs.211110.

21.
22.

Toolbox: Creating a systematic database of secretory pathway proteins uncovers new cargo for COPI.

Weill U, Arakel EC, Goldmann O, Golan M, Chuartzman S, Munro S, Schwappach B, Schuldiner M.

Traffic. 2018 May;19(5):370-379. doi: 10.1111/tra.12560.

23.

Maya Schuldiner.

Schuldiner M.

Curr Biol. 2017 Sep 25;27(18):R982-R984. doi: 10.1016/j.cub.2017.07.066. Epub 2017 Sep 25.

24.

Mind the Organelle Gap - Peroxisome Contact Sites in Disease.

Castro IG, Schuldiner M, Zalckvar E.

Trends Biochem Sci. 2018 Mar;43(3):199-210. doi: 10.1016/j.tibs.2018.01.001. Epub 2018 Jan 31. Review.

25.

Targeting and translocation of proteins to the endoplasmic reticulum at a glance.

Aviram N, Schuldiner M.

J Cell Sci. 2017 Dec 15;130(24):4079-4085. doi: 10.1242/jcs.204396. Review.

26.

Identification of seipin-linked factors that act as determinants of a lipid droplet subpopulation.

Eisenberg-Bord M, Mari M, Weill U, Rosenfeld-Gur E, Moldavski O, Castro IG, Soni KG, Harpaz N, Levine TP, Futerman AH, Reggiori F, Bankaitis VA, Schuldiner M, Bohnert M.

J Cell Biol. 2018 Jan 2;217(1):269-282. doi: 10.1083/jcb.201704122. Epub 2017 Nov 29.

27.

hSnd2 protein represents an alternative targeting factor to the endoplasmic reticulum in human cells.

Haßdenteufel S, Sicking M, Schorr S, Aviram N, Fecher-Trost C, Schuldiner M, Jung M, Zimmermann R, Lang S.

FEBS Lett. 2017 Oct;591(20):3211-3224. doi: 10.1002/1873-3468.12831. Epub 2017 Sep 14.

28.

Iron affects Ire1 clustering propensity and the amplitude of endoplasmic reticulum stress signaling.

Cohen N, Breker M, Bakunts A, Pesek K, Chas A, Argemí J, Orsi A, Gal L, Chuartzman S, Wigelman Y, Jonas F, Walter P, Ernst R, Aragón T, van Anken E, Schuldiner M.

J Cell Sci. 2017 Oct 1;130(19):3222-3233. doi: 10.1242/jcs.201715. Epub 2017 Aug 9.

29.

Two novel effectors of trafficking and maturation of the yeast plasma membrane H+ -ATPase.

Geva Y, Crissman J, Arakel EC, Gómez-Navarro N, Chuartzman SG, Stahmer KR, Schwappach B, Miller EA, Schuldiner M.

Traffic. 2017 Oct;18(10):672-682. doi: 10.1111/tra.12503. Epub 2017 Aug 16.

30.

Syp1 regulates the clathrin-mediated and clathrin-independent endocytosis of multiple cargo proteins through a novel sorting motif.

Apel AR, Hoban K, Chuartzman S, Tonikian R, Sidhu S, Schuldiner M, Wendland B, Prosser D.

Mol Biol Cell. 2017 Sep 1;28(18):2434-2448. doi: 10.1091/mbc.E15-10-0731. Epub 2017 Jul 12.

31.

Definition of a High-Confidence Mitochondrial Proteome at Quantitative Scale.

Morgenstern M, Stiller SB, Lübbert P, Peikert CD, Dannenmaier S, Drepper F, Weill U, Höß P, Feuerstein R, Gebert M, Bohnert M, van der Laan M, Schuldiner M, Schütze C, Oeljeklaus S, Pfanner N, Wiedemann N, Warscheid B.

Cell Rep. 2017 Jun 27;19(13):2836-2852. doi: 10.1016/j.celrep.2017.06.014.

32.

A different kind of love - lipid droplet contact sites.

Schuldiner M, Bohnert M.

Biochim Biophys Acta Mol Cell Biol Lipids. 2017 Oct;1862(10 Pt B):1188-1196. doi: 10.1016/j.bbalip.2017.06.005. Epub 2017 Jun 13. Review.

33.

Cellular Consequences of Diminished Protein O-Mannosyltransferase Activity in Baker's Yeast.

Zatorska E, Gal L, Schmitt J, Bausewein D, Schuldiner M, Strahl S.

Int J Mol Sci. 2017 Jun 9;18(6). pii: E1226. doi: 10.3390/ijms18061226.

34.

Saccharomyces cerevisiae cells lacking Pex3 contain membrane vesicles that harbor a subset of peroxisomal membrane proteins.

Wróblewska JP, Cruz-Zaragoza LD, Yuan W, Schummer A, Chuartzman SG, de Boer R, Oeljeklaus S, Schuldiner M, Zalckvar E, Warscheid B, Erdmann R, van der Klei IJ.

Biochim Biophys Acta Mol Cell Res. 2017 Oct;1864(10):1656-1667. doi: 10.1016/j.bbamcr.2017.05.021. Epub 2017 May 26.

35.

Heterosis as a consequence of regulatory incompatibility.

Herbst RH, Bar-Zvi D, Reikhav S, Soifer I, Breker M, Jona G, Shimoni E, Schuldiner M, Levy AA, Barkai N.

BMC Biol. 2017 May 11;15(1):38. doi: 10.1186/s12915-017-0373-7.

36.

Mitochatting - If only we could be a fly on the cell wall.

Eisenberg-Bord M, Schuldiner M.

Biochim Biophys Acta Mol Cell Res. 2017 Sep;1864(9):1469-1480. doi: 10.1016/j.bbamcr.2017.04.012. Epub 2017 Apr 20. Review.

37.

Peroxisome Mini-Libraries: Systematic Approaches to Study Peroxisomes Made Easy.

Dahan N, Schuldiner M, Zalckvar E.

Methods Mol Biol. 2017;1595:305-318. doi: 10.1007/978-1-4939-6937-1_28.

PMID:
28409473
38.

A pathway of targeted autophagy is induced by DNA damage in budding yeast.

Eapen VV, Waterman DP, Bernard A, Schiffmann N, Sayas E, Kamber R, Lemos B, Memisoglu G, Ang J, Mazella A, Chuartzman SG, Loewith RJ, Schuldiner M, Denic V, Klionsky DJ, Haber JE.

Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):E1158-E1167. doi: 10.1073/pnas.1614364114. Epub 2017 Feb 2.

39.

Combining Deep Sequencing, Proteomics, Phosphoproteomics, and Functional Screens To Discover Novel Regulators of Sphingolipid Homeostasis.

Lebesgue N, Megyeri M, Cristobal A, Scholten A, Chuartzman SG, Voichek Y, Scheltema RA, Mohammed S, Futerman AH, Schuldiner M, Heck AJ, Lemeer S.

J Proteome Res. 2017 Feb 3;16(2):571-582. doi: 10.1021/acs.jproteome.6b00691. Epub 2016 Nov 29.

PMID:
28152593
40.

Incredibly close-A newly identified peroxisome-ER contact site in humans.

Schuldiner M, Zalckvar E.

J Cell Biol. 2017 Feb;216(2):287-289. doi: 10.1083/jcb.201701072. Epub 2017 Jan 20.

41.

Pex35 is a regulator of peroxisome abundance.

Yofe I, Soliman K, Chuartzman SG, Morgan B, Weill U, Yifrach E, Dick TP, Cooper SJ, Ejsing CS, Schuldiner M, Zalckvar E, Thoms S.

J Cell Sci. 2017 Feb 15;130(4):791-804. doi: 10.1242/jcs.187914. Epub 2017 Jan 3.

42.

Mice lacking WRB reveal differential biogenesis requirements of tail-anchored proteins in vivo.

Rivera-Monroy J, Musiol L, Unthan-Fechner K, Farkas Á, Clancy A, Coy-Vergara J, Weill U, Gockel S, Lin SY, Corey DP, Kohl T, Ströbel P, Schuldiner M, Schwappach B, Vilardi F.

Sci Rep. 2016 Dec 21;6:39464. doi: 10.1038/srep39464.

43.

The SND proteins constitute an alternative targeting route to the endoplasmic reticulum.

Aviram N, Ast T, Costa EA, Arakel EC, Chuartzman SG, Jan CH, Haßdenteufel S, Dudek J, Jung M, Schorr S, Zimmermann R, Schwappach B, Weissman JS, Schuldiner M.

Nature. 2016 Nov 30;540(7631):134-138. doi: 10.1038/nature20169.

44.

A Tether Is a Tether Is a Tether: Tethering at Membrane Contact Sites.

Eisenberg-Bord M, Shai N, Schuldiner M, Bohnert M.

Dev Cell. 2016 Nov 21;39(4):395-409. doi: 10.1016/j.devcel.2016.10.022. Review.

45.

APOL1-Mediated Cell Injury Involves Disruption of Conserved Trafficking Processes.

Kruzel-Davila E, Shemer R, Ofir A, Bavli-Kertselli I, Darlyuk-Saadon I, Oren-Giladi P, Wasser WG, Magen D, Zaknoun E, Schuldiner M, Salzberg A, Kornitzer D, Marelja Z, Simons M, Skorecki K.

J Am Soc Nephrol. 2017 Apr;28(4):1117-1130. doi: 10.1681/ASN.2016050546. Epub 2016 Nov 18.

46.

Characterization of proteome dynamics during growth in oleate reveals a new peroxisome-targeting receptor.

Yifrach E, Chuartzman SG, Dahan N, Maskit S, Zada L, Weill U, Yofe I, Olender T, Schuldiner M, Zalckvar E.

J Cell Sci. 2016 Nov 1;129(21):4067-4075. Epub 2016 Sep 23.

47.

Making Sense of the Yeast Sphingolipid Pathway.

Megyeri M, Riezman H, Schuldiner M, Futerman AH.

J Mol Biol. 2016 Dec 4;428(24 Pt A):4765-4775. doi: 10.1016/j.jmb.2016.09.010. Epub 2016 Sep 21. Review.

PMID:
27664439
48.

An unrecognized function for COPII components in recruiting the viral replication protein BMV 1a to the perinuclear ER.

Li J, Fuchs S, Zhang J, Wellford S, Schuldiner M, Wang X.

J Cell Sci. 2016 Oct 1;129(19):3597-3608. Epub 2016 Aug 18.

49.

Ground control to major TOM: mitochondria-nucleus communication.

Eisenberg-Bord M, Schuldiner M.

FEBS J. 2017 Jan;284(2):196-210. doi: 10.1111/febs.13778. Epub 2016 Jul 4. Review.

50.

One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy.

Yofe I, Weill U, Meurer M, Chuartzman S, Zalckvar E, Goldman O, Ben-Dor S, Schütze C, Wiedemann N, Knop M, Khmelinskii A, Schuldiner M.

Nat Methods. 2016 Apr;13(4):371-378. doi: 10.1038/nmeth.3795. Epub 2016 Feb 29.

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