Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 31

1.

Ratio of mitochondrial to nuclear DNA affects contamination estimates in ancient DNA analysis.

Furtwängler A, Reiter E, Neumann GU, Siebke I, Steuri N, Hafner A, Lösch S, Anthes N, Schuenemann VJ, Krause J.

Sci Rep. 2018 Sep 19;8(1):14075. doi: 10.1038/s41598-018-32083-0.

PMID:
30232341
2.

Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium Treponema pallidum subsp. pertenue.

Knauf S, Gogarten JF, Schuenemann VJ, De Nys HM, Düx A, Strouhal M, Mikalová L, Bos KI, Armstrong R, Batamuzi EK, Chuma IS, Davoust B, Diatta G, Fyumagwa RD, Kazwala RR, Keyyu JD, Lejora IAV, Levasseur A, Liu H, Mayhew MA, Mediannikov O, Raoult D, Wittig RM, Roos C, Leendertz FH, Šmajs D, Nieselt K, Krause J, Calvignac-Spencer S.

Emerg Microbes Infect. 2018 Sep 19;7(1):157. doi: 10.1038/s41426-018-0156-4. No abstract available.

PMID:
30228266
3.

Ancient genome-wide analyses infer kinship structure in an Early Medieval Alemannic graveyard.

O'Sullivan N, Posth C, Coia V, Schuenemann VJ, Price TD, Wahl J, Pinhasi R, Zink A, Krause J, Maixner F.

Sci Adv. 2018 Sep 5;4(9):eaao1262. doi: 10.1126/sciadv.aao1262. eCollection 2018 Sep.

4.

Historic Treponema pallidum genomes from Colonial Mexico retrieved from archaeological remains.

Schuenemann VJ, Kumar Lankapalli A, Barquera R, Nelson EA, Iraíz Hernández D, Acuña Alonzo V, Bos KI, Márquez Morfín L, Herbig A, Krause J.

PLoS Negl Trop Dis. 2018 Jun 21;12(6):e0006447. doi: 10.1371/journal.pntd.0006447. eCollection 2018 Jun.

5.

Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe.

Schuenemann VJ, Avanzi C, Krause-Kyora B, Seitz A, Herbig A, Inskip S, Bonazzi M, Reiter E, Urban C, Dangvard Pedersen D, Taylor GM, Singh P, Stewart GR, Velemínský P, Likovsky J, Marcsik A, Molnár E, Pálfi G, Mariotti V, Riga A, Belcastro MG, Boldsen JL, Nebel A, Mays S, Donoghue HD, Zakrzewski S, Benjak A, Nieselt K, Cole ST, Krause J.

PLoS Pathog. 2018 May 10;14(5):e1006997. doi: 10.1371/journal.ppat.1006997. eCollection 2018 May.

6.

The rate and potential relevance of new mutations in a colonizing plant lineage.

Exposito-Alonso M, Becker C, Schuenemann VJ, Reiter E, Setzer C, Slovak R, Brachi B, Hagmann J, Grimm DG, Chen J, Busch W, Bergelson J, Ness RW, Krause J, Burbano HA, Weigel D.

PLoS Genet. 2018 Feb 12;14(2):e1007155. doi: 10.1371/journal.pgen.1007155. eCollection 2018 Feb.

7.

A15 Rapid radiation of treponema pallidum pertenue in wild non-human primates.

Düx A, Schuenemann VJ, Gogarten JF, De Nys HM, Nieselt K, Mayhew MA, Leendertz FH, Calvignac-Spencer S, Krause J.

Virus Evol. 2017 Mar 5;3(Suppl 1). pii: vew036.014. doi: 10.1093/ve/vew036.014. eCollection 2017 Mar. No abstract available.

8.

Reconstructing Asian faunal introductions to eastern Africa from multi-proxy biomolecular and archaeological datasets.

Prendergast ME, Buckley M, Crowther A, Frantz L, Eager H, Lebrasseur O, Hutterer R, Hulme-Beaman A, Van Neer W, Douka K, Veall MA, Quintana Morales EM, Schuenemann VJ, Reiter E, Allen R, Dimopoulos EA, Helm RM, Shipton C, Mwebi O, Denys C, Horton M, Wynne-Jones S, Fleisher J, Radimilahy C, Wright H, Searle JB, Krause J, Larson G, Boivin NL.

PLoS One. 2017 Aug 17;12(8):e0182565. doi: 10.1371/journal.pone.0182565. eCollection 2017. Erratum in: PLoS One. 2017 Dec 20;12 (12 ):e0190336.

9.

Genomic estimation of complex traits reveals ancient maize adaptation to temperate North America.

Swarts K, Gutaker RM, Benz B, Blake M, Bukowski R, Holland J, Kruse-Peeples M, Lepak N, Prim L, Romay MC, Ross-Ibarra J, Sanchez-Gonzalez JJ, Schmidt C, Schuenemann VJ, Krause J, Matson RG, Weigel D, Buckler ES, Burbano HA.

Science. 2017 Aug 4;357(6350):512-515. doi: 10.1126/science.aam9425.

PMID:
28774930
10.

Ancient Egyptian mummy genomes suggest an increase of Sub-Saharan African ancestry in post-Roman periods.

Schuenemann VJ, Peltzer A, Welte B, van Pelt WP, Molak M, Wang CC, Furtwängler A, Urban C, Reiter E, Nieselt K, Teßmann B, Francken M, Harvati K, Haak W, Schiffels S, Krause J.

Nat Commun. 2017 May 30;8:15694. doi: 10.1038/ncomms15694.

11.

A single haplotype hyposensitive to light and requiring strong vernalization dominates Arabidopsis thaliana populations in Patagonia, Argentina.

Kasulin L, Rowan BA, León RJC, Schuenemann VJ, Weigel D, Botto JF.

Mol Ecol. 2017 Jul;26(13):3389-3404. doi: 10.1111/mec.14107. Epub 2017 May 2.

PMID:
28316114
12.

Extraction of ultrashort DNA molecules from herbarium specimens.

Gutaker RM, Reiter E, Furtwängler A, Schuenemann VJ, Burbano HA.

Biotechniques. 2017 Feb 1;62(2):76-79. doi: 10.2144/000114517.

13.

Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster.

Arora N, Schuenemann VJ, Jäger G, Peltzer A, Seitz A, Herbig A, Strouhal M, Grillová L, Sánchez-Busó L, Kühnert D, Bos KI, Davis LR, Mikalová L, Bruisten S, Komericki P, French P, Grant PR, Pando MA, Vaulet LG, Fermepin MR, Martinez A, Centurion Lara A, Giacani L, Norris SJ, Šmajs D, Bosshard PP, González-Candelas F, Nieselt K, Krause J, Bagheri HC.

Nat Microbiol. 2016 Dec 5;2:16245. doi: 10.1038/nmicrobiol.2016.245.

14.

Effect of X-ray irradiation on ancient DNA in sub-fossil bones - Guidelines for safe X-ray imaging.

Immel A, Le Cabec A, Bonazzi M, Herbig A, Temming H, Schuenemann VJ, Bos KI, Langbein F, Harvati K, Bridault A, Pion G, Julien MA, Krotova O, Conard NJ, Münzel SC, Drucker DG, Viola B, Hublin JJ, Tafforeau P, Krause J.

Sci Rep. 2016 Sep 12;6:32969. doi: 10.1038/srep32969.

15.

Tools for opening new chapters in the book of Treponema pallidum evolutionary history.

Gogarten JF, Düx A, Schuenemann VJ, Nowak K, Boesch C, Wittig RM, Krause J, Calvignac-Spencer S, Leendertz FH.

Clin Microbiol Infect. 2016 Nov;22(11):916-921. doi: 10.1016/j.cmi.2016.07.027. Epub 2016 Aug 4. Review.

16.

Temporal patterns of damage and decay kinetics of DNA retrieved from plant herbarium specimens.

Weiß CL, Schuenemann VJ, Devos J, Shirsekar G, Reiter E, Gould BA, Stinchcombe JR, Krause J, Burbano HA.

R Soc Open Sci. 2016 Jun 22;3(6):160239. doi: 10.1098/rsos.160239. eCollection 2016 Jun.

17.

Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley.

Mascher M, Schuenemann VJ, Davidovich U, Marom N, Himmelbach A, Hübner S, Korol A, David M, Reiter E, Riehl S, Schreiber M, Vohr SH, Green RE, Dawson IK, Russell J, Kilian B, Muehlbauer GJ, Waugh R, Fahima T, Krause J, Weiss E, Stein N.

Nat Genet. 2016 Sep;48(9):1089-93. doi: 10.1038/ng.3611. Epub 2016 Jul 18.

PMID:
27428749
18.

Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus.

Bos KI, Herbig A, Sahl J, Waglechner N, Fourment M, Forrest SA, Klunk J, Schuenemann VJ, Poinar D, Kuch M, Golding GB, Dutour O, Keim P, Wagner DM, Holmes EC, Krause J, Poinar HN.

Elife. 2016 Jan 21;5:e12994. doi: 10.7554/eLife.12994.

19.

Mitochondrial Genomes of Giant Deers Suggest their Late Survival in Central Europe.

Immel A, Drucker DG, Bonazzi M, Jahnke TK, Münzel SC, Schuenemann VJ, Herbig A, Kind CJ, Krause J.

Sci Rep. 2015 Jun 8;5:10853. doi: 10.1038/srep10853.

20.

Insight into the evolution and origin of leprosy bacilli from the genome sequence of Mycobacterium lepromatosis.

Singh P, Benjak A, Schuenemann VJ, Herbig A, Avanzi C, Busso P, Nieselt K, Krause J, Vera-Cabrera L, Cole ST.

Proc Natl Acad Sci U S A. 2015 Apr 7;112(14):4459-64. doi: 10.1073/pnas.1421504112. Epub 2015 Mar 23.

21.

Parallel detection of ancient pathogens via array-based DNA capture.

Bos KI, Jäger G, Schuenemann VJ, Vågene ÅJ, Spyrou MA, Herbig A, Nieselt K, Krause J.

Philos Trans R Soc Lond B Biol Sci. 2015 Jan 19;370(1660):20130375. doi: 10.1098/rstb.2013.0375.

22.

Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis.

Bos KI, Harkins KM, Herbig A, Coscolla M, Weber N, Comas I, Forrest SA, Bryant JM, Harris SR, Schuenemann VJ, Campbell TJ, Majander K, Wilbur AK, Guichon RA, Wolfe Steadman DL, Cook DC, Niemann S, Behr MA, Zumarraga M, Bastida R, Huson D, Nieselt K, Young D, Parkhill J, Buikstra JE, Gagneux S, Stone AC, Krause J.

Nature. 2014 Oct 23;514(7523):494-7. doi: 10.1038/nature13591. Epub 2014 Aug 20.

23.

Mycobacterium leprae genomes from a British medieval leprosy hospital: towards understanding an ancient epidemic.

Mendum TA, Schuenemann VJ, Roffey S, Taylor GM, Wu H, Singh P, Tucker K, Hinds J, Cole ST, Kierzek AM, Nieselt K, Krause J, Stewart GR.

BMC Genomics. 2014 Apr 8;15:270. doi: 10.1186/1471-2164-15-270.

24.

Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs.

Thalmann O, Shapiro B, Cui P, Schuenemann VJ, Sawyer SK, Greenfield DL, Germonpré MB, Sablin MV, López-Giráldez F, Domingo-Roura X, Napierala H, Uerpmann HP, Loponte DM, Acosta AA, Giemsch L, Schmitz RW, Worthington B, Buikstra JE, Druzhkova A, Graphodatsky AS, Ovodov ND, Wahlberg N, Freedman AH, Schweizer RM, Koepfli KP, Leonard JA, Meyer M, Krause J, Pääbo S, Green RE, Wayne RK.

Science. 2013 Nov 15;342(6160):871-4. doi: 10.1126/science.1243650.

25.

Genome-wide comparison of medieval and modern Mycobacterium leprae.

Schuenemann VJ, Singh P, Mendum TA, Krause-Kyora B, Jäger G, Bos KI, Herbig A, Economou C, Benjak A, Busso P, Nebel A, Boldsen JL, Kjellström A, Wu H, Stewart GR, Taylor GM, Bauer P, Lee OY, Wu HH, Minnikin DE, Besra GS, Tucker K, Roffey S, Sow SO, Cole ST, Nieselt K, Krause J.

Science. 2013 Jul 12;341(6142):179-83. doi: 10.1126/science.1238286. Epub 2013 Jun 13.

26.

The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine.

Yoshida K, Schuenemann VJ, Cano LM, Pais M, Mishra B, Sharma R, Lanz C, Martin FN, Kamoun S, Krause J, Thines M, Weigel D, Burbano HA.

Elife. 2013 May 28;2:e00731. doi: 10.7554/eLife.00731. Erratum in: Elife. 2013;2:e01108.

27.

Structure-activity analysis of the dermcidin-derived peptide DCD-1L, an anionic antimicrobial peptide present in human sweat.

Paulmann M, Arnold T, Linke D, Özdirekcan S, Kopp A, Gutsmann T, Kalbacher H, Wanke I, Schuenemann VJ, Habeck M, Bürck J, Ulrich AS, Schittek B.

J Biol Chem. 2012 Mar 9;287(11):8434-43. doi: 10.1074/jbc.M111.332270. Epub 2012 Jan 18.

28.

A draft genome of Yersinia pestis from victims of the Black Death.

Bos KI, Schuenemann VJ, Golding GB, Burbano HA, Waglechner N, Coombes BK, McPhee JB, DeWitte SN, Meyer M, Schmedes S, Wood J, Earn DJ, Herring DA, Bauer P, Poinar HN, Krause J.

Nature. 2011 Oct 12;478(7370):506-10. doi: 10.1038/nature10549. Erratum in: Nature. 2011 Dec 8;480(7376):278.

29.

Targeted enrichment of ancient pathogens yielding the pPCP1 plasmid of Yersinia pestis from victims of the Black Death.

Schuenemann VJ, Bos K, DeWitte S, Schmedes S, Jamieson J, Mittnik A, Forrest S, Coombes BK, Wood JW, Earn DJ, White W, Krause J, Poinar HN.

Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):E746-52. doi: 10.1073/pnas.1105107108. Epub 2011 Aug 29.

30.

Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS.

Schuenemann VJ, Kralik SM, Albrecht R, Spall SK, Truscott KN, Dougan DA, Zeth K.

EMBO Rep. 2009 May;10(5):508-14. doi: 10.1038/embor.2009.62. Epub 2009 Apr 17. Erratum in: EMBO Rep. 2009 Jun;10(6):662.

31.

prlF and yhaV encode a new toxin-antitoxin system in Escherichia coli.

Schmidt O, Schuenemann VJ, Hand NJ, Silhavy TJ, Martin J, Lupas AN, Djuranovic S.

J Mol Biol. 2007 Sep 28;372(4):894-905. Epub 2007 Jul 21.

Supplemental Content

Loading ...
Support Center