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Items: 1 to 50 of 358

1.

Symposium report: One Health meets sequencing.

Egli A, Koch D, Danuser J, Hendriksen RS, Driesen S, Schmid DC, Neher R, Mäusezahl M, Seth-Smith HM, Bloemberg G, Tschudin-Sutter S, Endimiani A, Perreten V, Greub G, Schrenzel J, Stephan R.

Microbes Infect. 2019 Aug 8. pii: S1286-4579(19)30083-8. doi: 10.1016/j.micinf.2019.07.004. [Epub ahead of print]

2.

Identification of respiratory microbiota markers in ventilator-associated pneumonia.

Emonet S, Lazarevic V, Leemann Refondini C, Gaïa N, Leo S, Girard M, Nocquet Boyer V, Wozniak H, Després L, Renzi G, Mostaguir K, Dupuis Lozeron E, Schrenzel J, Pugin J.

Intensive Care Med. 2019 Aug;45(8):1082-1092. doi: 10.1007/s00134-019-05660-8. Epub 2019 Jun 17.

3.

Inactivation of farR Causes High Rhodomyrtone Resistance and Increased Pathogenicity in Staphylococcus aureus.

Nguyen MT, Saising J, Tribelli PM, Nega M, Diene SM, François P, Schrenzel J, Spröer C, Bunk B, Ebner P, Hertlein T, Kumari N, Härtner T, Wistuba D, Voravuthikunchai SP, Mäder U, Ohlsen K, Götz F.

Front Microbiol. 2019 May 28;10:1157. doi: 10.3389/fmicb.2019.01157. eCollection 2019.

4.

A molecular based diagnosis of positive blood culture in the context of viral haemorrhagic fever: proof of concept.

Cherkaoui A, Cherpillod P, Renzi G, Schrenzel J, Kaiser L, Schibler M.

Clin Microbiol Infect. 2019 Jun 6. pii: S1198-743X(19)30284-8. doi: 10.1016/j.cmi.2019.05.021. [Epub ahead of print]

PMID:
31175961
5.

Estimating the association between antibiotic exposure and colonization with extended-spectrum β-lactamase-producing Gram-negative bacteria using machine learning methods: a multicentre, prospective cohort study.

Tacconelli E, Górska A, De Angelis G, Lammens C, Restuccia G, Schrenzel J, Huson DH, Carević B, Preoţescu L, Carmeli Y, Kazma M, Spanu T, Carrara E, Malhotra-Kumar S, Gladstone BP.

Clin Microbiol Infect. 2019 May 23. pii: S1198-743X(19)30247-2. doi: 10.1016/j.cmi.2019.05.013. [Epub ahead of print]

PMID:
31128285
6.

Genomic epidemiology of Neisseria meningitidis serogroup W in Switzerland between 2010 and 2016.

Leo S, Lazarevic V, Girard M, Velasco GCG, Anson L, Gaïa N, Renzi G, Cherkaoui A, Born R, Basler S, Schrenzel J.

J Infect. 2019 Sep;79(3):277-287. doi: 10.1016/j.jinf.2019.05.014. Epub 2019 May 21. No abstract available.

PMID:
31125638
7.

[Fecal microbiota transplantation : current status and prospects].

Gilbert B, Schrenzel J.

Rev Med Suisse. 2019 May 8;15(650):976-983. French.

PMID:
31066530
8.

Listeria monocytogenes infectious periaortitis: a case report from the infectious disease standpoint.

Foulex A, Coen M, Cherkaoui A, Lazarevic V, Gaïa N, Leo S, Girard M, Mugnai D, Schrenzel J.

BMC Infect Dis. 2019 Apr 16;19(1):326. doi: 10.1186/s12879-019-3953-z.

9.

Copan WASPLab automation significantly reduces incubation times and allows earlier culture readings.

Cherkaoui A, Renzi G, Vuilleumier N, Schrenzel J.

Clin Microbiol Infect. 2019 Apr 12. pii: S1198-743X(19)30152-1. doi: 10.1016/j.cmi.2019.04.001. [Epub ahead of print]

PMID:
30986560
10.

Microbiological diagnostics of bloodstream infections in Europe-an ESGBIES survey.

Idelevich EA, Seifert H, Sundqvist M, Scudeller L, Amit S, Balode A, Bilozor A, Drevinek P, Kocak Tufan Z, Koraqi A, Lamy B, Mareković I, Miciuleviciene J, Müller Premru M, Pascual A, Pournaras S, Saegeman V, Schønheyder HC, Schrenzel J, Strateva T, Tilley R, Wiersinga WJ, Zabicka D, Carmeli Y, Becker K; ESCMID Study Group for Bloodstream Infections, Endocarditis and Sepsis (ESGBIES).

Clin Microbiol Infect. 2019 Apr 10. pii: S1198-743X(19)30143-0. doi: 10.1016/j.cmi.2019.03.024. [Epub ahead of print]

PMID:
30980927
11.

[Diphtheria: new clinical presentations of an old disease].

Coen M, Alberto C, Éperon G, Cherkaoui A, Schrenzel J.

Rev Med Suisse. 2019 Apr 10;15(646):786-790. French.

PMID:
30969492
12.

Messages from the third International Conference on Clinical Metagenomics (ICCMg3).

Ruppé E, Schrenzel J.

Microbes Infect. 2019 Mar 2. pii: S1286-4579(19)30026-7. doi: 10.1016/j.micinf.2019.02.004. [Epub ahead of print]

PMID:
30836173
13.

Potential in vivo transfer of a blaCTX-M14-harbouring plasmid established by combining long- and short-read sequencing.

Xavier BB, Renzi G, Lammens C, Cherkaoui A, Goossens H, Schrenzel J, Harbarth S, Malhotra-Kumar S.

J Microbiol Methods. 2019 Apr;159:1-4. doi: 10.1016/j.mimet.2019.02.004. Epub 2019 Feb 7.

PMID:
30738818
14.

The intestinal microbiota predisposes to traveler's diarrhea and to the carriage of multidrug-resistant Enterobacteriaceae after traveling to tropical regions.

Leo S, Lazarevic V, Gaïa N, Estellat C, Girard M, Matheron S, Armand-Lefèvre L, Andremont A The VOYAG-R study group, Schrenzel J, Ruppé E.

Gut Microbes. 2019 Feb 3:1-11. doi: 10.1080/19490976.2018.1564431. [Epub ahead of print]

PMID:
30714464
15.

Massive Diversity in Whole-Genome Sequences of Streptococcus suis Strains from Infected Pigs in Switzerland.

Stevens MJA, Spoerry Serrano N, Cernela N, Schmitt S, Schrenzel J, Stephan R.

Microbiol Resour Announc. 2019 Jan 31;8(5). pii: e01656-18. doi: 10.1128/MRA.01656-18. eCollection 2019 Jan.

16.

High-throughput sequencing for the aetiologic identification of viral encephalitis, meningoencephalitis, and meningitis. A narrative review and clinical appraisal.

Zanella MC, Lenggenhager L, Schrenzel J, Cordey S, Kaiser L.

Clin Microbiol Infect. 2019 Apr;25(4):422-430. doi: 10.1016/j.cmi.2018.12.022. Epub 2019 Jan 11. Review.

PMID:
30641229
17.

Comparison of analytical performances of the Roche Cobas 6800 CT/NG assay with the Abbott m2000 Real Time CT/NG assay for detecting Chlamydia trachomatis and Neisseria gonorrhoeae.

Cherkaoui A, Renzi G, Mombelli M, Jaton K, Yerly S, Vuilleumier N, Schrenzel J.

J Med Microbiol. 2019 Feb;68(2):197-200. doi: 10.1099/jmm.0.000909. Epub 2019 Jan 3.

PMID:
30605081
18.

Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform.

Egli A, Blanc DS, Greub G, Keller PM, Lazarevic V, Lebrand A, Leib S, Neher RA, Perreten V, Ramette A, Schrenzel J, Stephan R, Wagner K, Wuethrich D, Xenarios I.

Swiss Med Wkly. 2018 Dec 15;148:w14693. doi: 10.4414/smw.2018.14693. eCollection 2018 Dec 3.

19.

A community outbreak of Legionnaires' disease in Geneva, Switzerland, June to September 2017.

Zanella MC, Yerly S, Cherkaoui A, Renzi G, Mamin A, Lourenço Cordes L, Delaporte E, Baranczuk-Turska Z, Keiser O, Schrenzel J, Harbarth S, Gaia V, Kaiser L.

Swiss Med Wkly. 2018 Dec 2;148:w14687. doi: 10.4414/smw.2018.14687. eCollection 2018 Nov 19.

20.

Root Microbiota in Primary and Secondary Apical Periodontitis.

Bouillaguet S, Manoil D, Girard M, Louis J, Gaïa N, Leo S, Schrenzel J, Lazarevic V.

Front Microbiol. 2018 Oct 9;9:2374. doi: 10.3389/fmicb.2018.02374. eCollection 2018.

21.

Response to the letter to the editor: Comment on "Streptococcus anginosus Dental Implant-Related Osteomyelitis of the Jaws: An Insidious and Calamitous Entity".

Scolozzi P, Chatelain S, Schrenzel J, Lombardi T.

J Oral Maxillofac Surg. 2019 Jan;77(1):4. doi: 10.1016/j.joms.2018.09.005. Epub 2018 Oct 16. No abstract available.

PMID:
30339794
22.

[Current status of probiotics usage for the prevention of a first episode of Clostridium difficile infection].

Cantero C, Schrenzel J, Darbellay Farhoumand P.

Rev Med Suisse. 2018 Oct 17;14(623):1834-1837. French.

PMID:
30329228
23.

[Meningococcal infections in Switzerland : changes in epidemiology, clinical manifestations and prophylaxis].

Emonet S, Born R, Schrenzel J.

Rev Med Suisse. 2018 Oct 10;14(622):1781-1784. French.

PMID:
30307136
24.

A comparison of Sensititre™ Anaerobe MIC plate with ATB ANA® test for the routine susceptibility testing of common anaerobe pathogens.

Cherkaoui A, Fischer A, Azam N, Riat A, Schrenzel J.

Eur J Clin Microbiol Infect Dis. 2018 Dec;37(12):2279-2284. doi: 10.1007/s10096-018-3369-5. Epub 2018 Sep 6.

PMID:
30191340
25.

Functional Gut Microbiota Remodeling Contributes to the Caloric Restriction-Induced Metabolic Improvements.

Fabbiano S, Suárez-Zamorano N, Chevalier C, Lazarević V, Kieser S, Rigo D, Leo S, Veyrat-Durebex C, Gaïa N, Maresca M, Merkler D, Gomez de Agüero M, Macpherson A, Schrenzel J, Trajkovski M.

Cell Metab. 2018 Dec 4;28(6):907-921.e7. doi: 10.1016/j.cmet.2018.08.005. Epub 2018 Aug 30.

26.

Fecal microbiota transplantation: a promising strategy in preventing the progression of non-alcoholic steatohepatitis and improving the anti-cancer immune response.

Delaune V, Orci LA, Lacotte S, Peloso A, Schrenzel J, Lazarevic V, Toso C.

Expert Opin Biol Ther. 2018 Oct;18(10):1061-1071. doi: 10.1080/14712598.2018.1518424. Epub 2018 Sep 10. Review.

PMID:
30173562
27.

Molecular characterization of fluoroquinolones, macrolides, and imipenem resistance in Haemophilus influenzae: analysis of the mutations in QRDRs and assessment of the extent of the AcrAB-TolC-mediated resistance.

Cherkaoui A, Gaïa N, Baud D, Leo S, Fischer A, Ruppe E, François P, Schrenzel J.

Eur J Clin Microbiol Infect Dis. 2018 Nov;37(11):2201-2210. doi: 10.1007/s10096-018-3362-z. Epub 2018 Aug 25.

PMID:
30145620
28.

Emergence of ESBL-producing Escherichia coli ST131-C1-M27 clade colonizing patients in Europe.

Merino I, Hernández-García M, Turrientes MC, Pérez-Viso B, López-Fresneña N, Diaz-Agero C, Maechler F, Fankhauser-Rodriguez C, Kola A, Schrenzel J, Harbarth S, Bonten M, Gastmeier P, Canton R, Ruiz-Garbajosa P; R-GNOSIS Study Group .

J Antimicrob Chemother. 2018 Nov 1;73(11):2973-2980. doi: 10.1093/jac/dky296.

PMID:
30124851
29.

Remarkable geographical variations between India and Europe in carriage of the staphylococcal surface protein-encoding sasX/sesI and in the population structure of methicillin-resistant Staphylococcus aureus belonging to clonal complex 8.

De Backer S, Xavier BB, Vanjari L, Coppens J, Lammens C, Vemu L, Carevic B, Hryniewicz W, Jorens P, Kumar-Singh S, Lee A, Harbarth S, Schrenzel J, Tacconelli E, Goossens H, Malhotra-Kumar S.

Clin Microbiol Infect. 2019 May;25(5):628.e1-628.e7. doi: 10.1016/j.cmi.2018.07.024. Epub 2018 Aug 2.

PMID:
30076977
30.

When Bacterial Culture Fails, Metagenomics Can Help: A Case of Chronic Hepatic Brucelloma Assessed by Next-Generation Sequencing.

Lazarevic V, Gaïa N, Girard M, Leo S, Cherkaoui A, Renzi G, Emonet S, Jamme S, Ruppé E, Vijgen S, Rubbia-Brandt L, Toso C, Schrenzel J.

Front Microbiol. 2018 Jul 17;9:1566. doi: 10.3389/fmicb.2018.01566. eCollection 2018.

31.

Genetic Adaptation of a Mevalonate Pathway Deficient Mutant in Staphylococcus aureus.

Reichert S, Ebner P, Bonetti EJ, Luqman A, Nega M, Schrenzel J, Spröer C, Bunk B, Overmann J, Sass P, François P, Götz F.

Front Microbiol. 2018 Jul 12;9:1539. doi: 10.3389/fmicb.2018.01539. eCollection 2018.

32.

Colistin Heteroresistance and Involvement of the PmrAB Regulatory System in Acinetobacter baumannii.

Charretier Y, Diene SM, Baud D, Chatellier S, Santiago-Allexant E, van Belkum A, Guigon G, Schrenzel J.

Antimicrob Agents Chemother. 2018 Aug 27;62(9). pii: e00788-18. doi: 10.1128/AAC.00788-18. Print 2018 Sep.

33.

Accuracy of Sensititre YeastOne echinocandins epidemiological cut-off values for identification of FKS mutant Candida albicans and Candida glabrata: a ten year national survey of the Fungal Infection Network of Switzerland (FUNGINOS).

Kritikos A, Neofytos D, Khanna N, Schreiber PW, Boggian K, Bille J, Schrenzel J, Mühlethaler K, Zbinden R, Bruderer T, Goldenberger D, Pfyffer G, Conen A, Van Delden C, Zimmerli S, Sanglard D, Bachmann D, Marchetti O, Lamoth F; Fungal Infection Network of Switzerland (FUNGINOS).

Clin Microbiol Infect. 2018 Nov;24(11):1214.e1-1214.e4. doi: 10.1016/j.cmi.2018.05.012. Epub 2018 Jun 15.

PMID:
29909005
34.

[Microbiota and malnutrition: an overview].

Mareschal J, Schrenzel J, Lazarevic V, Genton L.

Rev Med Suisse. 2018 Jun 6;14(610):1194-1199. French.

PMID:
29877649
35.

Fast identification of dermatophytes by MALDI-TOF/MS using direct transfer of fungal cells on ground steel target plates.

da Cunha KC, Riat A, Normand AC, Bosshard PP, de Almeida MTG, Piarroux R, Schrenzel J, Fontao L.

Mycoses. 2018 Sep;61(9):691-697. doi: 10.1111/myc.12793. Epub 2018 Jun 20.

PMID:
29762871
36.

Messages from the second International Conference on Clinical Metagenomics (ICCMg2).

Ruppé E, Schrenzel J.

Microbes Infect. 2018 Apr;20(4):222-227. doi: 10.1016/j.micinf.2018.02.005. Epub 2018 Mar 8.

PMID:
29524500
37.

Correction to: Catheter retention as a consequence rather than a cause of unfavorable outcome in candidemia.

Damonti L, Erard V, Garbino J, Schrenzel J, Zimmerli S, Mühlethaler K, Imhof A, Zbinden R, Fehr J, Boggian K, Bruderer T, Flückiger U, Frei R, Orasch C, Conen A, Khanna N, Bregenzer T, Bille J, Lamoth F, Marchetti O, Bochud PY; Fungal Infection Network of Switzerland (FUNGINOS).

Intensive Care Med. 2018 Mar;44(3):405-407. doi: 10.1007/s00134-018-5081-4.

PMID:
29464298
38.

Control of Infectious Diseases in the Era of European Clinical Microbiology Laboratory Consolidation: New Challenges and Opportunities for the Patient and for Public Health Surveillance.

Vandenberg O, Kozlakidis Z, Schrenzel J, Struelens MJ, Breuer J.

Front Med (Lausanne). 2018 Feb 2;5:15. doi: 10.3389/fmed.2018.00015. eCollection 2018.

39.

Azole Resistance of Environmental and Clinical Aspergillus fumigatus Isolates from Switzerland.

Riat A, Plojoux J, Gindro K, Schrenzel J, Sanglard D.

Antimicrob Agents Chemother. 2018 Mar 27;62(4). pii: e02088-17. doi: 10.1128/AAC.02088-17. Print 2018 Apr.

40.

Fluconazole non-susceptible breakthrough candidemia after prolonged low-dose prophylaxis: a prospective FUNGINOS study.

Orasch C, Mertz D, Garbino J, van Delden C, Emonet S, Schrenzel J, Zimmerli S, Damonti L, Mühlethaler K, Imhof A, Ruef C, Fehr J, Zbinden R, Boggian K, Bruderer T, Flückiger U, Conen A, Khanna N, Frei R, Bregenzer T, Lamoth F, Erard V, Bochud PY, Calandra T, Bille J, Marchetti O; Fungal Infection Network of Switzerland (FUNGINOS).

J Infect. 2018 May;76(5):489-495. doi: 10.1016/j.jinf.2017.12.018. Epub 2018 Jan 31.

PMID:
29378240
41.

Correction to: Management and investigation of a Serratia marcescens outbreak in a neonatal unit in Switzerland - the role of hand hygiene and whole genome sequencing.

Zingg W, Soulake I, Baud D, Huttner B, Pfister R, Renzi G, Pittet D, Schrenzel J, Francois P.

Antimicrob Resist Infect Control. 2018 Jan 16;7:6. doi: 10.1186/s13756-017-0295-8. eCollection 2018.

42.
43.

Management and investigation of a Serratia marcescens outbreak in a neonatal unit in Switzerland - the role of hand hygiene and whole genome sequencing.

Zingg W, Soulake I, Baud D, Huttner B, Pfister R, Renzi G, Pittet D, Schrenzel J, Francois P.

Antimicrob Resist Infect Control. 2017 Dec 11;6:125. doi: 10.1186/s13756-017-0285-x. eCollection 2017. Erratum in: Antimicrob Resist Infect Control. 2018 Jan 16;7:6.

44.

In vivo selection of a multidrug-resistant Aeromonas salmonicida during medicinal leech therapy.

Ruppé E, Cherkaoui A, Wagner N, La Scala GC, Beaulieu JY, Girard M, Frey J, Lazarevic V, Schrenzel J.

New Microbes New Infect. 2017 Oct 10;21:23-27. doi: 10.1016/j.nmni.2017.10.005. eCollection 2018 Jan.

45.

Establishing Genotype-to-Phenotype Relationships in Bacteria Causing Hospital-Acquired Pneumonia: A Prelude to the Application of Clinical Metagenomics.

Ruppé E, Cherkaoui A, Lazarevic V, Emonet S, Schrenzel J.

Antibiotics (Basel). 2017 Nov 29;6(4). pii: E30. doi: 10.3390/antibiotics6040030. Review.

46.

Acute Septic Arthritis of the Knee Caused by Kingella kingae in a 5-Year-Old Cameroonian Boy.

El Houmami N, Ceroni D, Codjo Seignon K, Pons JC, Lambert C, Durand GA, Minodier P, Lamah L, Bidet P, Schrenzel J, Raoult D, Fournier PE.

Front Pediatr. 2017 Nov 6;5:230. doi: 10.3389/fped.2017.00230. eCollection 2017.

47.

A Novel Mechanism of Inactivating Antibacterial Nitro Compounds in the Human Pathogen Staphylococcus aureus by Overexpression of a NADH-Dependent Flavin Nitroreductase.

El-Hossary EM, Förstner KU, François P, Baud D, Streker K, Schrenzel J, Ohlsen K, Holzgrabe U.

Antimicrob Agents Chemother. 2018 Jan 25;62(2). pii: e01510-17. doi: 10.1128/AAC.01510-17. Print 2018 Feb.

48.

[Intestinal microbiota: towards therapeutic applications].

Schrenzel J, Lazarevic V.

Rev Med Suisse. 2017 Nov 8;13(582):1959-1961. Review. French.

PMID:
29120545
49.

Microbiote, médecine de précision et microbiologie.

Schrenzel J, Greub G.

Rev Med Suisse. 2017 Nov 8;13(582):1958. French. No abstract available.

PMID:
29120544
50.

A transversal pilot study of oropharyngeal carriage of Kingella kingae in healthy children younger than 6 months.

Spyropoulou V, Brändle G, Maggio ABR, Anderson Della Llana R, Cherkaoui A, Renzi G, Schrenzel J, Manzano S, Ceroni D.

World J Pediatr. 2017 Dec;13(6):615-617. doi: 10.1007/s12519-017-0060-3. Epub 2017 Oct 20.

PMID:
29058252

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