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Items: 44

1.

Correction to: A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578.

Shen Y, Dana H, Abdelfattah AS, Patel R, Shea J, Molina RS, Rawal B, Rancic V, Chang YF, Wu L, Chen Y, Qian Y, Wiens MD, Hambleton N, Ballanyi K, Hughes TE, Drobizhev M, Kim DS, Koyama M, Schreiter ER, Campbell RE.

BMC Biol. 2019 Oct 30;17(1):85. doi: 10.1186/s12915-019-0707-8.

2.

Author Correction: Kilohertz frame-rate two-photon tomography.

Kazemipour A, Novak O, Flickinger D, Marvin JS, Abdelfattah AS, King J, Borden PM, Kim JJ, Al-Abdullatif SH, Deal PE, Miller EW, Schreiter ER, Druckmann S, Svoboda K, Looger LL, Podgorski K.

Nat Methods. 2019 Sep;16(9):932. doi: 10.1038/s41592-019-0545-1.

PMID:
31388143
3.

Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.

Abdelfattah AS, Kawashima T, Singh A, Novak O, Liu H, Shuai Y, Huang YC, Campagnola L, Seeman SC, Yu J, Zheng J, Grimm JB, Patel R, Friedrich J, Mensh BD, Paninski L, Macklin JJ, Murphy GJ, Podgorski K, Lin BJ, Chen TW, Turner GC, Liu Z, Koyama M, Svoboda K, Ahrens MB, Lavis LD, Schreiter ER.

Science. 2019 Aug 16;365(6454):699-704. doi: 10.1126/science.aav6416. Epub 2019 Aug 1.

PMID:
31371562
4.

Kilohertz frame-rate two-photon tomography.

Kazemipour A, Novak O, Flickinger D, Marvin JS, Abdelfattah AS, King J, Borden PM, Kim JJ, Al-Abdullatif SH, Deal PE, Miller EW, Schreiter ER, Druckmann S, Svoboda K, Looger LL, Podgorski K.

Nat Methods. 2019 Aug;16(8):778-786. doi: 10.1038/s41592-019-0493-9. Epub 2019 Jul 29. Erratum in: Nat Methods. 2019 Sep;16(9):932.

PMID:
31363222
5.

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.

Dana H, Sun Y, Mohar B, Hulse BK, Kerlin AM, Hasseman JP, Tsegaye G, Tsang A, Wong A, Patel R, Macklin JJ, Chen Y, Konnerth A, Jayaraman V, Looger LL, Schreiter ER, Svoboda K, Kim DS.

Nat Methods. 2019 Jul;16(7):649-657. doi: 10.1038/s41592-019-0435-6. Epub 2019 Jun 17.

PMID:
31209382
6.

A genetically encoded near-infrared fluorescent calcium ion indicator.

Qian Y, Piatkevich KD, Mc Larney B, Abdelfattah AS, Mehta S, Murdock MH, Gottschalk S, Molina RS, Zhang W, Chen Y, Wu J, Drobizhev M, Hughes TE, Zhang J, Schreiter ER, Shoham S, Razansky D, Boyden ES, Campbell RE.

Nat Methods. 2019 Feb;16(2):171-174. doi: 10.1038/s41592-018-0294-6. Epub 2019 Jan 21.

7.

Improved methods for marking active neuron populations.

Moeyaert B, Holt G, Madangopal R, Perez-Alvarez A, Fearey BC, Trojanowski NF, Ledderose J, Zolnik TA, Das A, Patel D, Brown TA, Sachdev RNS, Eickholt BJ, Larkum ME, Turrigiano GG, Dana H, Gee CE, Oertner TG, Hope BT, Schreiter ER.

Nat Commun. 2018 Oct 25;9(1):4440. doi: 10.1038/s41467-018-06935-2.

8.

Inverse-response Ca2+ indicators for optogenetic visualization of neuronal inhibition.

Zhao Y, Bushey D, Zhao Y, Schreiter ER, Harrison DJ, Wong AM, Campbell RE.

Sci Rep. 2018 Aug 6;8(1):11758. doi: 10.1038/s41598-018-30080-x.

9.

A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578.

Shen Y, Dana H, Abdelfattah AS, Patel R, Shea J, Molina RS, Rawal B, Rancic V, Chang YF, Wu L, Chen Y, Qian Y, Wiens MD, Hambleton N, Ballanyi K, Hughes TE, Drobizhev M, Kim DS, Koyama M, Schreiter ER, Campbell RE.

BMC Biol. 2018 Jan 16;16(1):9. doi: 10.1186/s12915-018-0480-0. Erratum in: BMC Biol. 2019 Oct 30;17(1):85.

10.

Neural signatures of dynamic stimulus selection in Drosophila.

Sun Y, Nern A, Franconville R, Dana H, Schreiter ER, Looger LL, Svoboda K, Kim DS, Hermundstad AM, Jayaraman V.

Nat Neurosci. 2017 Aug;20(8):1104-1113. doi: 10.1038/nn.4581. Epub 2017 Jun 12.

PMID:
28604683
11.

Axonal Endoplasmic Reticulum Ca2+ Content Controls Release Probability in CNS Nerve Terminals.

de Juan-Sanz J, Holt GT, Schreiter ER, de Juan F, Kim DS, Ryan TA.

Neuron. 2017 Feb 22;93(4):867-881.e6. doi: 10.1016/j.neuron.2017.01.010. Epub 2017 Feb 2.

12.

All-optical functional synaptic connectivity mapping in acute brain slices using the calcium integrator CaMPARI.

Zolnik TA, Sha F, Johenning FW, Schreiter ER, Looger LL, Larkum ME, Sachdev RN.

J Physiol. 2017 Mar 1;595(5):1465-1477. doi: 10.1113/JP273116. Epub 2016 Dec 14.

13.

Design and Synthesis of a Calcium-Sensitive Photocage.

Heckman LM, Grimm JB, Schreiter ER, Kim C, Verdecia MA, Shields BC, Lavis LD.

Angew Chem Int Ed Engl. 2016 Jul 11;55(29):8363-6. doi: 10.1002/anie.201602941. Epub 2016 May 24.

14.

Sensitive red protein calcium indicators for imaging neural activity.

Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, Jayaraman V, Looger LL, Svoboda K, Kim DS.

Elife. 2016 Mar 24;5. pii: e12727. doi: 10.7554/eLife.12727.

15.

A Low Affinity GCaMP3 Variant (GCaMPer) for Imaging the Endoplasmic Reticulum Calcium Store.

Henderson MJ, Baldwin HA, Werley CA, Boccardo S, Whitaker LR, Yan X, Holt GT, Schreiter ER, Looger LL, Cohen AE, Kim DS, Harvey BK.

PLoS One. 2015 Oct 9;10(10):e0139273. doi: 10.1371/journal.pone.0139273. eCollection 2015.

16.

Structural basis for the antipolymer activity of Hb ζ2βs2 trapped in a tense conformation.

Safo MK, Ko TP, Schreiter ER, Russell JE.

J Mol Struct. 2015 Nov 5;1099:99-107.

17.

Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators.

Fosque BF, Sun Y, Dana H, Yang CT, Ohyama T, Tadross MR, Patel R, Zlatic M, Kim DS, Ahrens MB, Jayaraman V, Looger LL, Schreiter ER.

Science. 2015 Feb 13;347(6223):755-60. doi: 10.1126/science.1260922.

18.

A neuron-based screening platform for optimizing genetically-encoded calcium indicators.

Wardill TJ, Chen TW, Schreiter ER, Hasseman JP, Tsegaye G, Fosque BF, Behnam R, Shields BC, Ramirez M, Kimmel BE, Kerr RA, Jayaraman V, Looger LL, Svoboda K, Kim DS.

PLoS One. 2013 Oct 14;8(10):e77728. doi: 10.1371/journal.pone.0077728. eCollection 2013.

19.

Structure of fully liganded Hb ζ2β2s trapped in a tense conformation.

Safo MK, Ko TP, Abdulmalik O, He Z, Wang AH, Schreiter ER, Russell JE.

Acta Crystallogr D Biol Crystallogr. 2013 Oct;69(Pt 10):2061-71. doi: 10.1107/S0907444913019197. Epub 2013 Sep 20.

20.

Common genetic variation at the IL1RL1 locus regulates IL-33/ST2 signaling.

Ho JE, Chen WY, Chen MH, Larson MG, McCabe EL, Cheng S, Ghorbani A, Coglianese E, Emilsson V, Johnson AD, Walter S, Franceschini N, O'Donnell CJ; CARDIoGRAM Consortium; CHARGE Inflammation Working Group, Dehghan A, Lu C, Levy D, Newton-Cheh C; CHARGE Heart Failure Working Group, Lin H, Felix JF, Schreiter ER, Vasan RS, Januzzi JL, Lee RT, Wang TJ.

J Clin Invest. 2013 Oct;123(10):4208-18. doi: 10.1172/JCI67119. Epub 2013 Sep 3.

21.

Ultrasensitive fluorescent proteins for imaging neuronal activity.

Chen TW, Wardill TJ, Sun Y, Pulver SR, Renninger SL, Baohan A, Schreiter ER, Kerr RA, Orger MB, Jayaraman V, Looger LL, Svoboda K, Kim DS.

Nature. 2013 Jul 18;499(7458):295-300. doi: 10.1038/nature12354.

22.

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.

Akerboom J, Carreras Calderón N, Tian L, Wabnig S, Prigge M, Tolö J, Gordus A, Orger MB, Severi KE, Macklin JJ, Patel R, Pulver SR, Wardill TJ, Fischer E, Schüler C, Chen TW, Sarkisyan KS, Marvin JS, Bargmann CI, Kim DS, Kügler S, Lagnado L, Hegemann P, Gottschalk A, Schreiter ER, Looger LL.

Front Mol Neurosci. 2013 Mar 4;6:2. doi: 10.3389/fnmol.2013.00002. eCollection 2013.

23.

Structure, activity, and substrate selectivity of the Orf6 thioesterase from Photobacterium profundum.

Rodríguez-Guilbe M, Oyola-Robles D, Schreiter ER, Baerga-Ortiz A.

J Biol Chem. 2013 Apr 12;288(15):10841-8. doi: 10.1074/jbc.M112.446765. Epub 2013 Feb 21.

24.

An optimized fluorescent probe for visualizing glutamate neurotransmission.

Marvin JS, Borghuis BG, Tian L, Cichon J, Harnett MT, Akerboom J, Gordus A, Renninger SL, Chen TW, Bargmann CI, Orger MB, Schreiter ER, Demb JB, Gan WB, Hires SA, Looger LL.

Nat Methods. 2013 Feb;10(2):162-70. doi: 10.1038/nmeth.2333. Epub 2013 Jan 13.

25.

Optimization of a GCaMP calcium indicator for neural activity imaging.

Akerboom J, Chen TW, Wardill TJ, Tian L, Marvin JS, Mutlu S, Calderón NC, Esposti F, Borghuis BG, Sun XR, Gordus A, Orger MB, Portugues R, Engert F, Macklin JJ, Filosa A, Aggarwal A, Kerr RA, Takagi R, Kracun S, Shigetomi E, Khakh BS, Baier H, Lagnado L, Wang SS, Bargmann CI, Kimmel BE, Jayaraman V, Svoboda K, Kim DS, Schreiter ER, Looger LL.

J Neurosci. 2012 Oct 3;32(40):13819-40. doi: 10.1523/JNEUROSCI.2601-12.2012.

26.

Neural activity imaging with genetically encoded calcium indicators.

Tian L, Akerboom J, Schreiter ER, Looger LL.

Prog Brain Res. 2012;196:79-94. doi: 10.1016/B978-0-444-59426-6.00005-7. Review.

PMID:
22341322
27.

Structure of the Escherichia coli phosphonate binding protein PhnD and rationally optimized phosphonate biosensors.

Alicea I, Marvin JS, Miklos AE, Ellington AD, Looger LL, Schreiter ER.

J Mol Biol. 2011 Dec 2;414(3):356-69. doi: 10.1016/j.jmb.2011.09.047. Epub 2011 Oct 12.

28.

The structure, molecular dynamics, and energetics of centrin-melittin complex.

Sosa Ldel V, Alfaro E, Santiago J, Narváez D, Rosado MC, Rodríguez A, Gómez AM, Schreiter ER, Pastrana-Ríos B.

Proteins. 2011 Nov;79(11):3132-43. doi: 10.1002/prot.23142. Epub 2011 Aug 30.

29.

A genetically encoded, high-signal-to-noise maltose sensor.

Marvin JS, Schreiter ER, Echevarría IM, Looger LL.

Proteins. 2011 Nov;79(11):3025-36. doi: 10.1002/prot.23118.

30.

Structural basis of low-affinity nickel binding to the nickel-responsive transcription factor NikR from Escherichia coli.

Phillips CM, Schreiter ER, Stultz CM, Drennan CL.

Biochemistry. 2010 Sep 14;49(36):7830-8. doi: 10.1021/bi100923j.

31.

The heparin-binding domain of HB-EGF mediates localization to sites of cell-cell contact and prevents HB-EGF proteolytic release.

Prince RN, Schreiter ER, Zou P, Wiley HS, Ting AY, Lee RT, Lauffenburger DA.

J Cell Sci. 2010 Jul 1;123(Pt 13):2308-18. doi: 10.1242/jcs.058321. Epub 2010 Jun 8.

32.

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.

Tian L, Hires SA, Mao T, Huber D, Chiappe ME, Chalasani SH, Petreanu L, Akerboom J, McKinney SA, Schreiter ER, Bargmann CI, Jayaraman V, Svoboda K, Looger LL.

Nat Methods. 2009 Dec;6(12):875-81. doi: 10.1038/nmeth.1398. Epub 2009 Nov 8.

33.

Thioredoxin-independent regulation of metabolism by the alpha-arrestin proteins.

Patwari P, Chutkow WA, Cummings K, Verstraeten VL, Lammerding J, Schreiter ER, Lee RT.

J Biol Chem. 2009 Sep 11;284(37):24996-5003. doi: 10.1074/jbc.M109.018093. Epub 2009 Jul 15.

34.

Crystal structures of the GCaMP calcium sensor reveal the mechanism of fluorescence signal change and aid rational design.

Akerboom J, Rivera JD, Guilbe MM, Malavé EC, Hernandez HH, Tian L, Hires SA, Marvin JS, Looger LL, Schreiter ER.

J Biol Chem. 2009 Mar 6;284(10):6455-64. doi: 10.1074/jbc.M807657200. Epub 2008 Dec 18.

35.

Crystallization and preliminary X-ray characterization of the genetically encoded fluorescent calcium indicator protein GCaMP2.

Rodríguez Guilbe MM, Alfaro Malavé EC, Akerboom J, Marvin JS, Looger LL, Schreiter ER.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Jul 1;64(Pt 7):629-31. doi: 10.1107/S1744309108016059. Epub 2008 Jun 11.

36.

Crystallization and preliminary X-ray characterization of full-length Chlamydomonas reinhardtii centrin.

Alfaro E, Sosa Ldel V, Sanoguet Z, Pastrana-Ríos B, Schreiter ER.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 May 1;64(Pt 5):402-4. doi: 10.1107/S1744309108009123. Epub 2008 Apr 24.

37.

Structural basis of the metal specificity for nickel regulatory protein NikR.

Phillips CM, Schreiter ER, Guo Y, Wang SC, Zamble DB, Drennan CL.

Biochemistry. 2008 Feb 19;47(7):1938-46. doi: 10.1021/bi702006h. Epub 2008 Jan 15.

38.

Ribbon-helix-helix transcription factors: variations on a theme.

Schreiter ER, Drennan CL.

Nat Rev Microbiol. 2007 Sep;5(9):710-20. doi: 10.1038/nrmicro1717. Review.

PMID:
17676053
39.

IL-33 and ST2 comprise a critical biomechanically induced and cardioprotective signaling system.

Sanada S, Hakuno D, Higgins LJ, Schreiter ER, McKenzie AN, Lee RT.

J Clin Invest. 2007 Jun;117(6):1538-49. Epub 2007 May 10.

40.

S-nitrosylation-induced conformational change in blackfin tuna myoglobin.

Schreiter ER, Rodríguez MM, Weichsel A, Montfort WR, Bonaventura J.

J Biol Chem. 2007 Jul 6;282(27):19773-80. Epub 2007 May 8.

41.

Role of thioredoxin in cell growth through interactions with signaling molecules.

Yoshioka J, Schreiter ER, Lee RT.

Antioxid Redox Signal. 2006 Nov-Dec;8(11-12):2143-51. Review.

PMID:
17034356
42.

NikR-operator complex structure and the mechanism of repressor activation by metal ions.

Schreiter ER, Wang SC, Zamble DB, Drennan CL.

Proc Natl Acad Sci U S A. 2006 Sep 12;103(37):13676-81. Epub 2006 Aug 31.

43.

Crystal structure of the nickel-responsive transcription factor NikR.

Schreiter ER, Sintchak MD, Guo Y, Chivers PT, Sauer RT, Drennan CL.

Nat Struct Biol. 2003 Oct;10(10):794-9. Epub 2003 Sep 14.

PMID:
12970756
44.

Ionic liquids based on FeCl(3) and FeCl(2). Raman scattering and ab initio calculations.

Sitze MS, Schreiter ER, Patterson EV, Freeman RG.

Inorg Chem. 2001 May 7;40(10):2298-304.

PMID:
11327906

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