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Items: 36

1.

The mutational burden of therapy-related myeloid neoplasms is similar to primary myelodysplastic syndrome but has a distinctive distribution.

Singhal D, Wee LYA, Kutyna MM, Chhetri R, Geoghegan J, Schreiber AW, Feng J, Wang PP, Babic M, Parker WT, Hiwase S, Edwards S, Moore S, Branford S, Kuzmanovic T, Singhal N, Gowda R, Brown AL, Arts P, To LB, Bardy PG, Lewis ID, D'Andrea RJ, Maciejewski JP, Scott HS, Hahn CN, Hiwase DK.

Leukemia. 2019 May 14. doi: 10.1038/s41375-019-0479-8. [Epub ahead of print]

PMID:
31089247
2.

A novel germline SAMD9L mutation in a family with ataxia-pancytopenia syndrome and pediatric acute lymphoblastic leukemia.

Cheah JJC, Brown AL, Schreiber AW, Feng J, Babic M, Moore S, Young CC, Fine M, Phillips K, Guandalini M, Wilson P, Poplawski N, Hahn CN, Scott HS.

Haematologica. 2019 Jul;104(7):e318-e321. doi: 10.3324/haematol.2018.207316. Epub 2019 Mar 28. No abstract available.

3.

Integrative genomic analysis reveals cancer-associated mutations at diagnosis of CML in patients with high-risk disease.

Branford S, Wang P, Yeung DT, Thomson D, Purins A, Wadham C, Shahrin NH, Marum JE, Nataren N, Parker WT, Geoghegan J, Feng J, Shanmuganathan N, Mueller MC, Dietz C, Stangl D, Donaldson Z, Altamura H, Georgievski J, Braley J, Brown A, Hahn C, Walker I, Kim SH, Choi SY, Park SH, Kim DW, White DL, Yong ASM, Ross DM, Scott HS, Schreiber AW, Hughes TP.

Blood. 2018 Aug 30;132(9):948-961. doi: 10.1182/blood-2018-02-832253. Epub 2018 Jul 2.

PMID:
29967129
4.

miR-200/375 control epithelial plasticity-associated alternative splicing by repressing the RNA-binding protein Quaking.

Pillman KA, Phillips CA, Roslan S, Toubia J, Dredge BK, Bert AG, Lumb R, Neumann DP, Li X, Conn SJ, Liu D, Bracken CP, Lawrence DM, Stylianou N, Schreiber AW, Tilley WD, Hollier BG, Khew-Goodall Y, Selth LA, Goodall GJ, Gregory PA.

EMBO J. 2018 Jul 2;37(13). pii: e99016. doi: 10.15252/embj.201899016. Epub 2018 Jun 5.

5.

ASXL1 and BIM germ line variants predict response and identify CML patients with the greatest risk of imatinib failure.

Marum JE, Yeung DT, Purins L, Reynolds J, Parker WT, Stangl D, Wang PPS, Price DJ, Tuke J, Schreiber AW, Scott HS, Hughes TP, Branford S.

Blood Adv. 2017 Jul 31;1(18):1369-1381. doi: 10.1182/bloodadvances.2017006825. eCollection 2017 Aug 8.

6.

ARMC5 is not implicated in familial hyperaldosteronism type II (FH-II).

De Sousa SMC, Stowasser M, Feng J, Schreiber AW, Wang P, Hahn CN, Gordon RD, Torpy DJ, Scott HS, Gagliardi L.

J Hum Hypertens. 2017 Dec;31(12):857-859. doi: 10.1038/jhh.2017.71. Epub 2017 Oct 12. No abstract available.

PMID:
29022889
7.

Self-reverting mutations partially correct the blood phenotype in a Diamond Blackfan anemia patient.

Venugopal P, Moore S, Lawrence DM, George AJ, Hannan RD, Bray SC, To LB, D'Andrea RJ, Feng J, Tirimacco A, Yeoman AL, Young CC, Fine M, Schreiber AW, Hahn CN, Barnett C, Saxon B, Scott HS.

Haematologica. 2017 Dec;102(12):e506-e509. doi: 10.3324/haematol.2017.166678. Epub 2017 Sep 29. No abstract available.

8.

T cell receptor assessment in autoimmune disease requires access to the most adjacent immunologically active organ.

Oftedal BE, Ardesjö Lundgren B, Hamm D, Gan PY, Holdsworth SR, Hahn CN, Schreiber AW, Scott HS.

J Autoimmun. 2017 Jul;81:24-33. doi: 10.1016/j.jaut.2017.03.002. Epub 2017 Mar 18.

9.

Ectrodactyly and Lethal Pulmonary Acinar Dysplasia Associated with Homozygous FGFR2 Mutations Identified by Exome Sequencing.

Barnett CP, Nataren NJ, Klingler-Hoffmann M, Schwarz Q, Chong CE, Lee YK, Bruno DL, Lipsett J, McPhee AJ, Schreiber AW, Feng J, Hahn CN, Scott HS.

Hum Mutat. 2016 Sep;37(9):955-63. doi: 10.1002/humu.23032. Epub 2016 Jul 11.

PMID:
27323706
10.

BAM-matcher: a tool for rapid NGS sample matching.

Wang PP, Parker WT, Branford S, Schreiber AW.

Bioinformatics. 2016 Sep 1;32(17):2699-701. doi: 10.1093/bioinformatics/btw239. Epub 2016 May 3.

PMID:
27153667
11.

Novel germ line DDX41 mutations define families with a lower age of MDS/AML onset and lymphoid malignancies.

Lewinsohn M, Brown AL, Weinel LM, Phung C, Rafidi G, Lee MK, Schreiber AW, Feng J, Babic M, Chong CE, Lee Y, Yong A, Suthers GK, Poplawski N, Altree M, Phillips K, Jaensch L, Fine M, D'Andrea RJ, Lewis ID, Medeiros BC, Pollyea DA, King MC, Walsh T, Keel S, Shimamura A, Godley LA, Hahn CN, Churpek JE, Scott HS.

Blood. 2016 Feb 25;127(8):1017-23. doi: 10.1182/blood-2015-10-676098. Epub 2015 Dec 28.

12.

Mutations in the mammalian target of rapamycin pathway regulators NPRL2 and NPRL3 cause focal epilepsy.

Ricos MG, Hodgson BL, Pippucci T, Saidin A, Ong YS, Heron SE, Licchetta L, Bisulli F, Bayly MA, Hughes J, Baldassari S, Palombo F; Epilepsy Electroclinical Study Group, Santucci M, Meletti S, Berkovic SF, Rubboli G, Thomas PQ, Scheffer IE, Tinuper P, Geoghegan J, Schreiber AW, Dibbens LM.

Ann Neurol. 2016 Jan;79(1):120-31. doi: 10.1002/ana.24547. Epub 2015 Dec 12.

PMID:
26505888
13.

Delayed diagnosis leading to accelerated-phase chronic eosinophilic leukemia due to a cytogenetically cryptic, imatinib-responsive TNIP1-PDFGRB fusion gene.

Ross DM, Altamura HK, Hahn CN, Nicola M, Yeoman AL, Holloway MR, Geoghegan J, Feng J, Schreiber AW, Branford S, Moore S, Scott HS.

Leukemia. 2016 Jun;30(6):1402-5. doi: 10.1038/leu.2015.301. Epub 2015 Oct 27. No abstract available.

PMID:
26503642
14.

Maize maintains growth in response to decreased nitrate supply through a highly dynamic and developmental stage-specific transcriptional response.

Plett D, Baumann U, Schreiber AW, Holtham L, Kalashyan E, Toubia J, Nau J, Beatty M, Rafalski A, Dhugga KS, Tester M, Garnett T, Kaiser BN.

Plant Biotechnol J. 2016 Jan;14(1):342-53. doi: 10.1111/pbi.12388. Epub 2015 Jun 2.

15.

Allan-Herndon-Dudley syndrome with unusual profound sensorineural hearing loss.

Gagliardi L, Nataren N, Feng J, Schreiber AW, Hahn CN, Conwell LS, Coman D, Scott HS.

Am J Med Genet A. 2015 Aug;167A(8):1872-6. doi: 10.1002/ajmg.a.37075. Epub 2015 Apr 6.

PMID:
25850411
16.

The RNA binding protein quaking regulates formation of circRNAs.

Conn SJ, Pillman KA, Toubia J, Conn VM, Salmanidis M, Phillips CA, Roslan S, Schreiber AW, Gregory PA, Goodall GJ.

Cell. 2015 Mar 12;160(6):1125-34. doi: 10.1016/j.cell.2015.02.014.

17.

A tale of two siblings: two cases of AML arising from a single pre-leukemic DNMT3A mutant clone.

Hahn CN, Ross DM, Feng J, Beligaswatte A, Hiwase DK, Parker WT, Ho M, Zawitkowski M, Ambler KL, Cheetham GD, Lee YK, Babic M, Butcher CM, Engler GA, Brown AL, D'Andrea RJ, Lewis ID, Schreiber AW, To LB, Scott HS.

Leukemia. 2015 Oct;29(10):2101-4. doi: 10.1038/leu.2015.67. Epub 2015 Mar 9. No abstract available.

18.

ARMC5 mutations are common in familial bilateral macronodular adrenal hyperplasia.

Gagliardi L, Schreiber AW, Hahn CN, Feng J, Cranston T, Boon H, Hotu C, Oftedal BE, Cutfield R, Adelson DL, Braund WJ, Gordon RD, Rees DA, Grossman AB, Torpy DJ, Scott HS.

J Clin Endocrinol Metab. 2014 Sep;99(9):E1784-92. doi: 10.1210/jc.2014-1265. Epub 2014 Jun 6.

PMID:
24905064
19.

Sequencing error correction without a reference genome.

Sleep JA, Schreiber AW, Baumann U.

BMC Bioinformatics. 2013 Dec 18;14:367. doi: 10.1186/1471-2105-14-367.

20.

Nutlin-3a efficacy in sarcoma predicted by transcriptomic and epigenetic profiling.

Pishas KI, Neuhaus SJ, Clayer MT, Schreiber AW, Lawrence DM, Perugini M, Whitfield RJ, Farshid G, Manavis J, Chryssidis S, Mayo BJ, Haycox RC, Ho K, Brown MP, D'Andrea RJ, Evdokiou A, Thomas DM, Desai J, Callen DF, Neilsen PM.

Cancer Res. 2014 Feb 1;74(3):921-31. doi: 10.1158/0008-5472.CAN-13-2424. Epub 2013 Dec 13.

21.

A comparative analysis of algorithms for somatic SNV detection in cancer.

Roberts ND, Kortschak RD, Parker WT, Schreiber AW, Branford S, Scott HS, Glonek G, Adelson DL.

Bioinformatics. 2013 Sep 15;29(18):2223-30. doi: 10.1093/bioinformatics/btt375. Epub 2013 Jul 9.

22.

Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat.

Schreiber AW, Hayden MJ, Forrest KL, Kong SL, Langridge P, Baumann U.

BMC Genomics. 2012 Sep 19;13:492. doi: 10.1186/1471-2164-13-492.

23.

Clusters of genes encoding fructan biosynthesizing enzymes in wheat and barley.

Huynh BL, Mather DE, Schreiber AW, Toubia J, Baumann U, Shoaei Z, Stein N, Ariyadasa R, Stangoulis JC, Edwards J, Shirley N, Langridge P, Fleury D.

Plant Mol Biol. 2012 Oct;80(3):299-314. doi: 10.1007/s11103-012-9949-3. Epub 2012 Aug 3.

PMID:
22864927
24.

Discovery of barley miRNAs through deep sequencing of short reads.

Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U.

BMC Genomics. 2011 Feb 25;12:129. doi: 10.1186/1471-2164-12-129.

25.

Cell-specific vacuolar calcium storage mediated by CAX1 regulates apoplastic calcium concentration, gas exchange, and plant productivity in Arabidopsis.

Conn SJ, Gilliham M, Athman A, Schreiber AW, Baumann U, Moller I, Cheng NH, Stancombe MA, Hirschi KD, Webb AA, Burton R, Kaiser BN, Tyerman SD, Leigh RA.

Plant Cell. 2011 Jan;23(1):240-57. doi: 10.1105/tpc.109.072769. Epub 2011 Jan 21.

26.

Comparative transcriptomics in the Triticeae.

Schreiber AW, Sutton T, Caldo RA, Kalashyan E, Lovell B, Mayo G, Muehlbauer GJ, Druka A, Waugh R, Wise RP, Langridge P, Baumann U.

BMC Genomics. 2009 Jun 29;10:285. doi: 10.1186/1471-2164-10-285.

27.

Combining transcriptional datasets using the generalized singular value decomposition.

Schreiber AW, Shirley NJ, Burton RA, Fincher GB.

BMC Bioinformatics. 2008 Aug 8;9:335. doi: 10.1186/1471-2105-9-335.

28.

A framework for gene expression analysis.

Schreiber AW, Baumann U.

Bioinformatics. 2007 Jan 15;23(2):191-7. Epub 2006 Nov 21.

PMID:
17118957
29.

Comment on "unique translation between Hamiltonian operators and functional integrals".

Weyrauch M, Schreiber AW.

Phys Rev Lett. 2002 Feb 18;88(7):078901. Epub 2002 Jan 31. No abstract available.

PMID:
11863945
30.

Polaron variational methods in the particle representation of field theory. II. Numerical results for the propagator.

Rosenfelder R, Schreiber AW.

Phys Rev D Part Fields. 1996 Mar 15;53(6):3354-3365. No abstract available.

PMID:
10020329
31.

Polaron variational methods in the particle representation of field theory. I. General formalism.

Rosenfelder R, Schreiber AW.

Phys Rev D Part Fields. 1996 Mar 15;53(6):3337-3353. No abstract available.

PMID:
10020328
32.

Deep-inelastic scattering from off-shell nucleons.

Melnitchouk W, Schreiber AW, Thomas AW.

Phys Rev D Part Fields. 1994 Feb 1;49(3):1183-1198. No abstract available.

PMID:
10017090
33.

Pion cloud of the nucleon and its effect on deep-inelastic structure.

Schreiber AW, Mulders PJ, Signal AI, Thomas AW.

Phys Rev D Part Fields. 1992 May 1;45(9):3069-3078. No abstract available.

PMID:
10014708
34.

Structure functions in the bag model.

Schreiber AW, Signal AI, Thomas AW.

Phys Rev D Part Fields. 1991 Nov 1;44(9):2653-2662. No abstract available.

PMID:
10014155
35.

QCD evolution of the spin structure functions of the neutron and proton.

Schreiber AW, Thomas AW, Londergan JT.

Phys Rev D Part Fields. 1990 Oct 1;42(7):2226-2236. No abstract available.

PMID:
10013076
36.

Hemochromatosis and the heart.

SCHREIBER AW.

Ann Intern Med. 1957 Nov;47(5):1015-21. No abstract available.

PMID:
13470725

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