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Items: 17


Correlating Genotype and Phenotype in the Asexual Yeast Candida orthopsilosis Implicates ZCF29 in Sensitivity to Caffeine.

de San Vicente KM, Schröder MS, Lombardi L, Iracane E, Butler G.

G3 (Bethesda). 2019 Sep 4;9(9):3035-3043. doi: 10.1534/g3.119.400348.


Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis.

Zhu Y, Engström PG, Tellgren-Roth C, Baudo CD, Kennell JC, Sun S, Billmyre RB, Schröder MS, Andersson A, Holm T, Sigurgeirsson B, Wu G, Sankaranarayanan SR, Siddharthan R, Sanyal K, Lundeberg J, Nystedt B, Boekhout T, Dawson TL Jr, Heitman J, Scheynius A, Lehtiö J.

Nucleic Acids Res. 2017 Mar 17;45(5):2629-2643. doi: 10.1093/nar/gkx006.


The CgHaa1-Regulon Mediates Response and Tolerance to Acetic Acid Stress in the Human Pathogen Candida glabrata.

Bernardo RT, Cunha DV, Wang C, Pereira L, Silva S, Salazar SB, Schröder MS, Okamoto M, Takahashi-Nakaguchi A, Chibana H, Aoyama T, Sá-Correia I, Azeredo J, Butler G, Mira NP.

G3 (Bethesda). 2017 Jan 5;7(1):1-18. doi: 10.1534/g3.116.034660.


Multiple Origins of the Pathogenic Yeast Candida orthopsilosis by Separate Hybridizations between Two Parental Species.

Schröder MS, Martinez de San Vicente K, Prandini TH, Hammel S, Higgins DG, Bagagli E, Wolfe KH, Butler G.

PLoS Genet. 2016 Nov 2;12(11):e1006404. doi: 10.1371/journal.pgen.1006404. eCollection 2016 Nov.


Identification of Non-Coding RNAs in the Candida parapsilosis Species Group.

Donovan PD, Schröder MS, Higgins DG, Butler G.

PLoS One. 2016 Sep 22;11(9):e0163235. doi: 10.1371/journal.pone.0163235. eCollection 2016.


Genefu: an R/Bioconductor package for computation of gene expression-based signatures in breast cancer.

Gendoo DM, Ratanasirigulchai N, Schröder MS, Paré L, Parker JS, Prat A, Haibe-Kains B.

Bioinformatics. 2016 Apr 1;32(7):1097-9. doi: 10.1093/bioinformatics/btv693. Epub 2015 Nov 24.


Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin.

Wu G, Zhao H, Li C, Rajapakse MP, Wong WC, Xu J, Saunders CW, Reeder NL, Reilman RA, Scheynius A, Sun S, Billmyre BR, Li W, Averette AF, Mieczkowski P, Heitman J, Theelen B, Schröder MS, De Sessions PF, Butler G, Maurer-Stroh S, Boekhout T, Nagarajan N, Dawson TL Jr.

PLoS Genet. 2015 Nov 5;11(11):e1005614. doi: 10.1371/journal.pgen.1005614. eCollection 2015 Nov.


Using RNA-seq for Analysis of Differential Gene Expression in Fungal Species.

Wang C, Schröder MS, Hammel S, Butler G.

Methods Mol Biol. 2016;1361:1-40. doi: 10.1007/978-1-4939-3079-1_1.


Comparative phenotypic analysis of the major fungal pathogens Candida parapsilosis and Candida albicans.

Holland LM, Schröder MS, Turner SA, Taff H, Andes D, Grózer Z, Gácser A, Ames L, Haynes K, Higgins DG, Butler G.

PLoS Pathog. 2014 Sep 18;10(9):e1004365. doi: 10.1371/journal.ppat.1004365. eCollection 2014 Sep.


Bassoon specifically controls presynaptic P/Q-type Ca(2+) channels via RIM-binding protein.

Davydova D, Marini C, King C, Klueva J, Bischof F, Romorini S, Montenegro-Venegas C, Heine M, Schneider R, Schröder MS, Altrock WD, Henneberger C, Rusakov DA, Gundelfinger ED, Fejtova A.

Neuron. 2014 Apr 2;82(1):181-94. doi: 10.1016/j.neuron.2014.02.012.


Organizing a PhD symposium--an inside view. Setting up a scientific meeting is challenging--a PhD symposium offers its own unique opportunities and pitfalls.

Schröder MS, Harnett D, Minke BA, Nair PS; Committee Member Consortium.

EMBO Rep. 2013 Oct;14(10):856-60. doi: 10.1038/embor.2013.147. Epub 2013 Sep 17. No abstract available.


Regulation of presynaptic anchoring of the scaffold protein Bassoon by phosphorylation-dependent interaction with 14-3-3 adaptor proteins.

Schröder MS, Stellmacher A, Romorini S, Marini C, Montenegro-Venegas C, Altrock WD, Gundelfinger ED, Fejtova A.

PLoS One. 2013;8(3):e58814. doi: 10.1371/journal.pone.0058814. Epub 2013 Mar 14.


Comparative genome analysis and gene finding in Candida species using CGOB.

Maguire SL, ÓhÉigeartaigh SS, Byrne KP, Schröder MS, O'Gaora P, Wolfe KH, Butler G.

Mol Biol Evol. 2013 Jun;30(6):1281-91. doi: 10.1093/molbev/mst042. Epub 2013 Mar 13.


RamiGO: an R/Bioconductor package providing an AmiGO visualize interface.

Schröder MS, Gusenleitner D, Quackenbush J, Culhane AC, Haibe-Kains B.

Bioinformatics. 2013 Mar 1;29(5):666-8. doi: 10.1093/bioinformatics/bts708. Epub 2013 Jan 6.


GeneSigDB: a manually curated database and resource for analysis of gene expression signatures.

Culhane AC, Schröder MS, Sultana R, Picard SC, Martinelli EN, Kelly C, Haibe-Kains B, Kapushesky M, St Pierre AA, Flahive W, Picard KC, Gusenleitner D, Papenhausen G, O'Connor N, Correll M, Quackenbush J.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1060-6. doi: 10.1093/nar/gkr901. Epub 2011 Nov 21.


survcomp: an R/Bioconductor package for performance assessment and comparison of survival models.

Schröder MS, Culhane AC, Quackenbush J, Haibe-Kains B.

Bioinformatics. 2011 Nov 15;27(22):3206-8. doi: 10.1093/bioinformatics/btr511. Epub 2011 Sep 7.


[Creative (psycho-) therapy--art therapy].

Schröder MS.

Praxis (Bern 1994). 1998 Aug 5;87(31-32):997-1004. German. No abstract available.


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