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Items: 34

1.

High dietary salt-induced dendritic cell activation underlies microbial dysbiosis-associated hypertension.

Ferguson JF, Aden LA, Barbaro NR, Van Beusecum JP, Xiao L, Simons AJ, Warden C, Pasic L, Himmel LE, Washington MK, Revetta FL, Zhao S, Kumaresan S, Scholz MB, Tang Z, Chen G, Reilly MP, Kirabo A.

JCI Insight. 2019 Jun 4;5. pii: 126241. doi: 10.1172/jci.insight.126241.

2.

Modification of the Gastric Mucosal Microbiota by a Strain-Specific Helicobacter pylori Oncoprotein and Carcinogenic Histologic Phenotype.

Noto JM, Zackular JP, Varga MG, Delgado A, Romero-Gallo J, Scholz MB, Piazuelo MB, Skaar EP, Peek RM Jr.

MBio. 2019 May 28;10(3). pii: e00955-19. doi: 10.1128/mBio.00955-19.

3.

Effect of environmental salt concentration on the Helicobacter pylori exoproteome.

Caston RR, Loh JT, Voss BJ, McDonald WH, Scholz MB, McClain MS, Cover TL.

J Proteomics. 2019 Jun 30;202:103374. doi: 10.1016/j.jprot.2019.05.002. Epub 2019 May 4.

PMID:
31063819
4.

Correlation between the composition of green Arabica coffee beans and the sensory quality of coffee brews.

Barbosa MSG, Scholz MBDS, Kitzberger CSG, Benassi MT.

Food Chem. 2019 Sep 15;292:275-280. doi: 10.1016/j.foodchem.2019.04.072. Epub 2019 Apr 20.

PMID:
31054676
5.

Endogenous double-stranded Alu RNA elements stimulate IFN-responses in relapsing remitting multiple sclerosis.

Heinrich MJ, Purcell CA, Pruijssers AJ, Zhao Y, Spurlock CF 3rd, Sriram S, Ogden KM, Dermody TS, Scholz MB, Crooke PS 3rd, Karijolich J, Aune TM.

J Autoimmun. 2019 Jun;100:40-51. doi: 10.1016/j.jaut.2019.02.003. Epub 2019 Feb 28.

PMID:
30826177
6.

The typicity of coffees from different terroirs determined by groups of physico-chemical and sensory variables and multiple factor analysis.

Scholz MBDS, Kitzberger CSG, Prudencio SH, Silva RSDSFD.

Food Res Int. 2018 Dec;114:72-80. doi: 10.1016/j.foodres.2018.07.058. Epub 2018 Jul 31.

PMID:
30361029
7.

Genome-wide association study reveals candidate genes influencing lipids and diterpenes contents in Coffea arabica L.

Sant'Ana GC, Pereira LFP, Pot D, Ivamoto ST, Domingues DS, Ferreira RV, Pagiatto NF, da Silva BSR, Nogueira LM, Kitzberger CSG, Scholz MBS, de Oliveira FF, Sera GH, Padilha L, Labouisse JP, Guyot R, Charmetant P, Leroy T.

Sci Rep. 2018 Jan 11;8(1):465. doi: 10.1038/s41598-017-18800-1.

8.

High-Salt Conditions Alter Transcription of Helicobacter pylori Genes Encoding Outer Membrane Proteins.

Loh JT, Beckett AC, Scholz MB, Cover TL.

Infect Immun. 2018 Feb 20;86(3). pii: e00626-17. doi: 10.1128/IAI.00626-17. Print 2018 Mar.

9.

Draft Genome Sequence of Bacillus licheniformis Strain YNP1-TSU Isolated from Whiterock Springs in Yellowstone National Park.

O'Hair JA, Li H, Thapa S, Scholz MB, Zhou S.

Genome Announc. 2017 Mar 2;5(9). pii: e01496-16. doi: 10.1128/genomeA.01496-16.

10.

Diterpenes biochemical profile and transcriptional analysis of cytochrome P450s genes in leaves, roots, flowers, and during Coffea arabica L. fruit development.

Ivamoto ST, Sakuray LM, Ferreira LP, Kitzberger CSG, Scholz MBS, Pot D, Leroy T, Vieira LGE, Domingues DS, Pereira LFP.

Plant Physiol Biochem. 2017 Feb;111:340-347. doi: 10.1016/j.plaphy.2016.12.004. Epub 2016 Dec 3.

PMID:
28002787
11.

SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis.

Johnson BK, Scholz MB, Teal TK, Abramovitch RB.

BMC Bioinformatics. 2016 Feb 4;17:66. doi: 10.1186/s12859-016-0923-y.

12.

Draft Genomes for Eight Burkholderia mallei Isolates from Turkey.

Daligault HE, Johnson SL, Davenport KW, Minogue TD, Bishop-Lilly KA, Broomall SM, Bruce DC, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Koroleva GI, Ladner JT, Lo CC, Munk C, Wolcott MJ, Palacios GF, Redden CL, Rosenzweig CN, Scholz MB, Chain PS.

Genome Announc. 2016 Jan 7;4(1). pii: e01234-15. doi: 10.1128/genomeA.01234-15.

13.

Accurate read-based metagenome characterization using a hierarchical suite of unique signatures.

Freitas TA, Li PE, Scholz MB, Chain PS.

Nucleic Acids Res. 2015 May 26;43(10):e69. doi: 10.1093/nar/gkv180. Epub 2015 Mar 12.

14.

Whole-genome assemblies of 56 burkholderia species.

Daligault HE, Davenport KW, Minogue TD, Bishop-Lilly KA, Broomall SM, Bruce DC, Chain PS, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Koroleva GI, Ladner JT, Lo CC, Munk C, Palacios GF, Redden CL, Rosenzweig CN, Scholz MB, Johnson SL.

Genome Announc. 2014 Nov 20;2(6). pii: e01106-14. doi: 10.1128/genomeA.01106-14.

15.

Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk.

O'Connor RM, Fung JM, Sharp KH, Benner JS, McClung C, Cushing S, Lamkin ER, Fomenkov AI, Henrissat B, Londer YY, Scholz MB, Posfai J, Malfatti S, Tringe SG, Woyke T, Malmstrom RR, Coleman-Derr D, Altamia MA, Dedrick S, Kaluziak ST, Haygood MG, Distel DL.

Proc Natl Acad Sci U S A. 2014 Nov 25;111(47):E5096-104. doi: 10.1073/pnas.1413110111. Epub 2014 Nov 10.

16.

Complete Genome Assembly of Staphylococcus epidermidis AmMS 205.

Davenport KW, Daligault HE, Minogue TD, Bishop-Lilly KA, Broomall SM, Bruce DC, Chain PS, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Redden CL, Rosenzweig CN, Scholz MB, Teshima H, Johnson SL.

Genome Announc. 2014 Nov 6;2(6). pii: e01059-14. doi: 10.1128/genomeA.01059-14.

17.

Complete Genome Sequence of Type Strain Pasteurella multocida subsp. multocida ATCC 43137.

Davenport KW, Daligault HE, Minogue TD, Bishop-Lilly KA, Bruce DC, Chain PS, Coyne SR, Frey KG, Jaissle J, Koroleva GI, Ladner JT, Lo CC, Palacios GF, Redden CL, Scholz MB, Teshima H, Johnson SL.

Genome Announc. 2014 Oct 23;2(5). pii: e01070-14. doi: 10.1128/genomeA.01070-14.

18.

Whole-Genome Yersinia sp. Assemblies from 10 Diverse Strains.

Daligault HE, Davenport KW, Minogue TD, Bishop-Lilly KA, Broomall SM, Bruce DC, Chain PS, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Koroleva GI, Ladner JT, Lo CC, Munk C, Palacios GF, Redden CL, Rosenzweig CN, Scholz MB, Johnson SL.

Genome Announc. 2014 Oct 23;2(5). pii: e01055-14. doi: 10.1128/genomeA.01055-14.

19.

Twenty Whole-Genome Bacillus sp. Assemblies.

Daligault HE, Davenport KW, Minogue TD, Bishop-Lilly KA, Broomall SM, Bruce DC, Chain PS, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Koroleva GI, Ladner JT, Lo CC, Munk C, Palacios GF, Redden CL, Rosenzweig CN, Scholz MB, Johnson SL.

Genome Announc. 2014 Oct 9;2(5). pii: e00958-14. doi: 10.1128/genomeA.00958-14.

20.

Whole-genome sequences of nine francisella isolates.

Davenport KW, Daligault HE, Minogue TD, Bishop-Lilly KA, Broomall SM, Bruce DC, Chain PS, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Koroleva GI, Ladner JT, Palacios GF, Redden CL, Rosenzweig CN, Scholz MB, Teshima H, Johnson SL.

Genome Announc. 2014 Sep 25;2(5). pii: e00941-14. doi: 10.1128/genomeA.00941-14.

21.

Complete Genome Sequence of Stenotrophomonas maltophilia Type Strain 810-2 (ATCC 13637).

Davenport KW, Daligault HE, Minogue TD, Broomall SM, Bruce DC, Chain PS, Coyne SR, Gibbons HS, Jaissle J, Li PE, Rosenzweig CN, Scholz MB, Johnson SL.

Genome Announc. 2014 Sep 25;2(5). pii: e00974-14. doi: 10.1128/genomeA.00974-14.

22.

Whole-Genome Sequence of Listeria monocytogenes Type Strain 53 XXIII.

Davenport KW, Daligault HE, Minogue TD, Bishop-Lilly KA, Bruce DC, Chain PS, Coyne SR, Frey KG, Jaissle J, Koroleva GI, Ladner JT, Li PE, Palacios GF, Redden CL, Scholz MB, Teshima H, Johnson SL.

Genome Announc. 2014 Sep 25;2(5). pii: e00970-14. doi: 10.1128/genomeA.00970-14.

23.

Draft Genome Assembly of Delftia acidovorans Type Strain 2167.

Davenport KW, Daligault HE, Minogue TD, Bishop-Lilly KA, Bruce DC, Chain PS, Coyne SR, Frey KG, Jaissle J, Koroleva GI, Ladner JT, Palacios GF, Redden CL, Scholz MB, Teshima H, Johnson SL.

Genome Announc. 2014 Sep 18;2(5). pii: e00917-14. doi: 10.1128/genomeA.00917-14.

24.

Whole-genome sequences of 24 Brucella strains.

Minogue TD, Daligault HA, Davenport KW, Bishop-Lilly KA, Broomall SM, Bruce DC, Chain PS, Chertkov O, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Koroleva GI, Ladner JT, Lo CC, Palacios GF, Redden CL, Rosenzweig CN, Scholz MB, Xu Y, Johnson SL.

Genome Announc. 2014 Sep 18;2(5). pii: e00915-14. doi: 10.1128/genomeA.00915-14.

25.

Draft Genome Assembly of Acinetobacter baumannii ATCC 19606.

Davenport KW, Daligault HE, Minogue TD, Bruce DC, Chain PS, Coyne SR, Jaissle JG, Koroleva GI, Ladner JT, Li PE, Palacios GF, Scholz MB, Teshima H, Johnson SL.

Genome Announc. 2014 Aug 21;2(4). pii: e00832-14. doi: 10.1128/genomeA.00832-14.

26.

Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage.

Dodsworth JA, Blainey PC, Murugapiran SK, Swingley WD, Ross CA, Tringe SG, Chain PS, Scholz MB, Lo CC, Raymond J, Quake SR, Hedlund BP.

Nat Commun. 2013;4:1854. doi: 10.1038/ncomms2884.

27.

A novel metatranscriptomic approach to identify gene expression dynamics during extracellular electron transfer.

Ishii S, Suzuki S, Norden-Krichmar TM, Tenney A, Chain PS, Scholz MB, Nealson KH, Bretschger O.

Nat Commun. 2013;4:1601. doi: 10.1038/ncomms2615.

PMID:
23511466
28.

Gene expression and enzymatic activity of pectin methylesterase during fruit development and ripening in Coffea arabica L.

Cação SM, Leite TF, Budzinski IG, dos Santos TB, Scholz MB, Carpentieri-Pipolo V, Domingues DS, Vieira LG, Pereira LF.

Genet Mol Res. 2012 Sep 3;11(3):3186-97.

29.

Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis.

Scholz MB, Lo CC, Chain PS.

Curr Opin Biotechnol. 2012 Feb;23(1):9-15. doi: 10.1016/j.copbio.2011.11.013. Epub 2011 Dec 9. Review.

PMID:
22154470
30.

Genomics for key players in the N cycle from guinea pigs to the next frontier.

Chain PS, Xie G, Starkenburg SR, Scholz MB, Beckloff N, Lo CC, Davenport KW, Reitenga KG, Daligault HE, Detter JC, Freitas TA, Gleasner CD, Green LD, Han CS, McMurry KK, Meincke LJ, Shen X, Zeytun A.

Methods Enzymol. 2011;496:289-318. doi: 10.1016/B978-0-12-386489-5.00012-9. Review.

PMID:
21514469
31.

Reliable indirect competitive ELISA used for a survey of ochratoxin A in green coffee from the North of Paraná State, Brazil.

Fujii S, Ribeiro RM, Scholz MB, Ono EY, Prete CE, Itano EN, Ueno Y, Kawamura O, Hirooka EY.

Food Addit Contam. 2006 Sep;23(9):902-9.

PMID:
16901859
32.

[Event-related potentials and memory capacity: 2. Recognition of words].

Münte TF, Heinze HJ, Bartusch SM, Dietrich DE, Scholz MB.

EEG EMG Z Elektroenzephalogr Elektromyogr Verwandte Geb. 1990 Jun;21(2):87-91. German.

PMID:
2113460
33.

[Event-related potentials and memory capacity: 1. A comparison of intentional and incidental learning modes].

Heinze HJ, Münte TF, Dietrich DE, Bartusch SM, Scholz MB.

EEG EMG Z Elektroenzephalogr Elektromyogr Verwandte Geb. 1990 Jun;21(2):82-6. German.

PMID:
2113459
34.

Event-related potentials and visual spatial attention: influence of a cholinergic drug.

Münte TF, Heinze HJ, Scholz MB, Bartusch SM, Dietrich DE.

Neuropsychobiology. 1989;21(2):94-9.

PMID:
2615925

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