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Items: 30

1.

Database resources of the National Center for Biotechnology Information.

Sayers EW, Agarwala R, Bolton EE, Brister JR, Canese K, Clark K, Connor R, Fiorini N, Funk K, Hefferon T, Holmes JB, Kim S, Kimchi A, Kitts PA, Lathrop S, Lu Z, Madden TL, Marchler-Bauer A, Phan L, Schneider VA, Schoch CL, Pruitt KD, Ostell J.

Nucleic Acids Res. 2019 Jan 8;47(D1):D23-D28. doi: 10.1093/nar/gky1069.

2.

High-resolution comparative analysis of great ape genomes.

Kronenberg ZN, Fiddes IT, Gordon D, Murali S, Cantsilieris S, Meyerson OS, Underwood JG, Nelson BJ, Chaisson MJP, Dougherty ML, Munson KM, Hastie AR, Diekhans M, Hormozdiari F, Lorusso N, Hoekzema K, Qiu R, Clark K, Raja A, Welch AE, Sorensen M, Baker C, Fulton RS, Armstrong J, Graves-Lindsay TA, Denli AM, Hoppe ER, Hsieh P, Hill CM, Pang AWC, Lee J, Lam ET, Dutcher SK, Gage FH, Warren WC, Shendure J, Haussler D, Schneider VA, Cao H, Ventura M, Wilson RK, Paten B, Pollen A, Eichler EE.

Science. 2018 Jun 8;360(6393). pii: eaar6343. doi: 10.1126/science.aar6343.

3.

Imaging the Antistaphylococcal Activity of CATH-2: Mechanism of Attack and Regulation of Inflammatory Response.

Schneider VAF, Coorens M, Tjeerdsma-van Bokhoven JLM, Posthuma G, van Dijk A, Veldhuizen EJA, Haagsman HP.

mSphere. 2017 Nov 1;2(6). pii: e00370-17. doi: 10.1128/mSphere.00370-17. eCollection 2017 Nov-Dec.

4.

Cathelicidins Inhibit Escherichia coli-Induced TLR2 and TLR4 Activation in a Viability-Dependent Manner.

Coorens M, Schneider VAF, de Groot AM, van Dijk A, Meijerink M, Wells JM, Scheenstra MR, Veldhuizen EJA, Haagsman HP.

J Immunol. 2017 Aug 15;199(4):1418-1428. doi: 10.4049/jimmunol.1602164. Epub 2017 Jul 14.

5.

Antimicrobial and Immunomodulatory Activity of PMAP-23 Derived Peptides.

Veldhuizen EJA, Scheenstra MR, Tjeerdsma-van Bokhoven JLM, Coorens M, Schneider VAF, Bikker FJ, van Dijk A, Haagsman HP.

Protein Pept Lett. 2017;24(7):609-616. doi: 10.2174/0929866524666170428150925.

PMID:
28462713
6.

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly.

Schneider VA, Graves-Lindsay T, Howe K, Bouk N, Chen HC, Kitts PA, Murphy TD, Pruitt KD, Thibaud-Nissen F, Albracht D, Fulton RS, Kremitzki M, Magrini V, Markovic C, McGrath S, Steinberg KM, Auger K, Chow W, Collins J, Harden G, Hubbard T, Pelan S, Simpson JT, Threadgold G, Torrance J, Wood JM, Clarke L, Koren S, Boitano M, Peluso P, Li H, Chin CS, Phillippy AM, Durbin R, Wilson RK, Flicek P, Eichler EE, Church DM.

Genome Res. 2017 May;27(5):849-864. doi: 10.1101/gr.213611.116. Epub 2017 Apr 10.

7.

The dbGaP data browser: a new tool for browsing dbGaP controlled-access genomic data.

Wong KM, Langlais K, Tobias GS, Fletcher-Hoppe C, Krasnewich D, Leeds HS, Rodriguez LL, Godynskiy G, Schneider VA, Ramos EM, Sherry ST.

Nucleic Acids Res. 2017 Jan 4;45(D1):D819-D826. doi: 10.1093/nar/gkw1139. Epub 2016 Nov 29.

8.

Imaging the antimicrobial mechanism(s) of cathelicidin-2.

Schneider VA, Coorens M, Ordonez SR, Tjeerdsma-van Bokhoven JL, Posthuma G, van Dijk A, Haagsman HP, Veldhuizen EJ.

Sci Rep. 2016 Sep 14;6:32948. doi: 10.1038/srep32948.

9.

N-Terminal Ile-Orn- and Trp-Orn-Motif Repeats Enhance Membrane Interaction and Increase the Antimicrobial Activity of Apidaecins against Pseudomonas aeruginosa.

Bluhm ME, Schneider VA, Schäfer I, Piantavigna S, Goldbach T, Knappe D, Seibel P, Martin LL, Veldhuizen EJ, Hoffmann R.

Front Cell Dev Biol. 2016 May 10;4:39. doi: 10.3389/fcell.2016.00039. eCollection 2016.

10.

Prophylactic administration of chicken cathelicidin-2 boosts zebrafish embryonic innate immunity.

Schneider VA, van Dijk A, van der Sar AM, Kraaij MD, Veldhuizen EJ, Haagsman HP.

Dev Comp Immunol. 2016 Jul;60:108-14. doi: 10.1016/j.dci.2016.02.023. Epub 2016 Feb 23.

11.

Extending reference assembly models.

Church DM, Schneider VA, Steinberg KM, Schatz MC, Quinlan AR, Chin CS, Kitts PA, Aken B, Marth GT, Hoffman MM, Herrero J, Mendoza ML, Durbin R, Flicek P.

Genome Biol. 2015 Jan 24;16:13. doi: 10.1186/s13059-015-0587-3.

12.

Single haplotype assembly of the human genome from a hydatidiform mole.

Steinberg KM, Schneider VA, Graves-Lindsay TA, Fulton RS, Agarwala R, Huddleston J, Shiryev SA, Morgulis A, Surti U, Warren WC, Church DM, Eichler EE, Wilson RK.

Genome Res. 2014 Dec;24(12):2066-76. doi: 10.1101/gr.180893.114. Epub 2014 Nov 4.

13.

Antimicrobial and immunomodulatory activities of PR-39 derived peptides.

Veldhuizen EJ, Schneider VA, Agustiandari H, van Dijk A, Tjeerdsma-van Bokhoven JL, Bikker FJ, Haagsman HP.

PLoS One. 2014 Apr 22;9(4):e95939. doi: 10.1371/journal.pone.0095939. eCollection 2014.

14.

Chicken cathelicidins display antimicrobial activity against multiresistant bacteria without inducing strong resistance.

Veldhuizen EJ, Brouwer EC, Schneider VA, Fluit AC.

PLoS One. 2013 Apr 22;8(4):e61964. doi: 10.1371/journal.pone.0061964. Print 2013.

15.

A novel role for Lh3 dependent ECM modifications during neural crest cell migration in zebrafish.

Banerjee S, Isaacman-Beck J, Schneider VA, Granato M.

PLoS One. 2013;8(1):e54609. doi: 10.1371/journal.pone.0054609. Epub 2013 Jan 18.

16.

Clone DB: an integrated NCBI resource for clone-associated data.

Schneider VA, Chen HC, Clausen C, Meric PA, Zhou Z, Bouk N, Husain N, Maglott DR, Church DM.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1070-8. doi: 10.1093/nar/gks1164. Epub 2012 Nov 27.

17.

Modernizing reference genome assemblies.

Church DM, Schneider VA, Graves T, Auger K, Cunningham F, Bouk N, Chen HC, Agarwala R, McLaren WM, Ritchie GR, Albracht D, Kremitzki M, Rock S, Kotkiewicz H, Kremitzki C, Wollam A, Trani L, Fulton L, Fulton R, Matthews L, Whitehead S, Chow W, Torrance J, Dunn M, Harden G, Threadgold G, Wood J, Collins J, Heath P, Griffiths G, Pelan S, Grafham D, Eichler EE, Weinstock G, Mardis ER, Wilson RK, Howe K, Flicek P, Hubbard T.

PLoS Biol. 2011 Jul;9(7):e1001091. doi: 10.1371/journal.pbio.1001091. Epub 2011 Jul 5. No abstract available.

18.

The process-inducing activity of transmembrane agrin requires follistatin-like domains.

Porten E, Seliger B, Schneider VA, Wöll S, Stangel D, Ramseger R, Kröger S.

J Biol Chem. 2010 Jan 29;285(5):3114-25. doi: 10.1074/jbc.M109.039420. Epub 2009 Nov 25.

19.

Genomic structure and embryonic expression of zebrafish lysyl hydroxylase 1 and lysyl hydroxylase 2.

Schneider VA, Granato M.

Matrix Biol. 2007 Jan;26(1):12-9. Epub 2006 Sep 19.

21.

Genetic screens for genes controlling motor nerve-muscle development and interactions.

Birely J, Schneider VA, Santana E, Dosch R, Wagner DS, Mullins MC, Granato M.

Dev Biol. 2005 Apr 1;280(1):162-76.

22.

Motor axon migration: a long way to go.

Schneider VA, Granato M.

Dev Biol. 2003 Nov 1;263(1):1-11. Review.

23.

Wnt antagonism initiates cardiogenesis in Xenopus laevis.

Schneider VA, Mercola M.

Genes Dev. 2001 Feb 1;15(3):304-15.

24.

Spatially distinct head and heart inducers within the Xenopus organizer region.

Schneider VA, Mercola M.

Curr Biol. 1999 Jul 29-Aug 12;9(15):800-9.

25.

Burn-associated peripheral polyneuropathy. A search for causative factors.

Margherita AJ, Robinson LR, Heimbach DM, Fishfader VL, Schneider VA, Jones D.

Am J Phys Med Rehabil. 1995 Jan-Feb;74(1):28-32.

PMID:
7873110
26.

Combined effects of compression and hypotension on nerve root function. A clinical case.

Krengel WF 3rd, Robinson LR, Schneider VA.

Spine (Phila Pa 1976). 1993 Feb;18(2):306-9.

PMID:
8441949
27.

Effect of age on cisternal cerebrospinal fluid concentrations of monoamine metabolites in nonhuman primates.

Shelton SE, Kalin NH, Gluck JP, Keresztury MF, Schneider VA, Lewis MH.

Neurochem Int. 1988;13(3):353-7.

PMID:
19651091
28.

Gonadal steroids modulate pulsatile luteinizing hormone secretion by perifused rat anterior pituitary cells.

Kamel F, Balz JA, Kubajak CL, Schneider VA.

Endocrinology. 1987 Apr;120(4):1651-7.

PMID:
3549267
29.
30.

Evaluating a phone system: one approach.

Bakewell TF, Schneider VA Jr.

Med Group Manage. 1978 Jul-Aug;25(4):36-8.

PMID:
10308387

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