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Microbiota of newborn calves and their mothers reveals possible transfer routes for newborn calves' gastrointestinal microbiota.

Klein-Jöbstl D, Quijada NM, Dzieciol M, Feldbacher B, Wagner M, Drillich M, Schmitz-Esser S, Mann E.

PLoS One. 2019 Aug 1;14(8):e0220554. doi: 10.1371/journal.pone.0220554. eCollection 2019.


Microbiota of the Gut-Lymph Node Axis: Depletion of Mucosa-Associated Segmented Filamentous Bacteria and Enrichment of Methanobrevibacter by Colistin Sulfate and Linco-Spectin in Pigs.

Zwirzitz B, Pinior B, Metzler-Zebeli B, Handler M, Gense K, Knecht C, Ladinig A, Dzieciol M, Wetzels SU, Wagner M, Schmitz-Esser S, Mann E.

Front Microbiol. 2019 Apr 11;10:599. doi: 10.3389/fmicb.2019.00599. eCollection 2019.


Microbial shifts in Minas artisanal cheeses from the Serra do Salitre region of Minas Gerais, Brazil throughout ripening time.

Sant'Anna FM, Wetzels SU, Cicco SHS, Figueiredo RC, Sales GA, Figueiredo NC, Nunes CA, Schmitz-Esser S, Mann E, Wagner M, Souza MR.

Food Microbiol. 2019 Sep;82:349-362. doi: 10.1016/ Epub 2019 Mar 3.


Brevibacterium from Austrian hard cheese harbor a putative histamine catabolism pathway and a plasmid for adaptation to the cheese environment.

Anast JM, Dzieciol M, Schultz DL, Wagner M, Mann E, Schmitz-Esser S.

Sci Rep. 2019 Apr 16;9(1):6164. doi: 10.1038/s41598-019-42525-y.


Plasmids contribute to food processing environment-associated stress survival in three Listeria monocytogenes ST121, ST8, and ST5 strains.

Naditz AL, Dzieciol M, Wagner M, Schmitz-Esser S.

Int J Food Microbiol. 2019 Jun 16;299:39-46. doi: 10.1016/j.ijfoodmicro.2019.03.016. Epub 2019 Mar 29.


Exogenous carbohydrases added to a starter diet reduced markers of systemic immune activation and decreased Lactobacillus in weaned pigs1.

Li Q, Schmitz-Esser S, Loving CL, Gabler NK, Gould SA, Patience JF.

J Anim Sci. 2019 Mar 1;97(3):1242-1253. doi: 10.1093/jas/sky481.


The Plastidic Sugar Transporter pSuT Influences Flowering and Affects Cold Responses.

Patzke K, Prananingrum P, Klemens PAW, Trentmann O, Rodrigues CM, Keller I, Fernie AR, Geigenberger P, Bölter B, Lehmann M, Schmitz-Esser S, Pommerrenig B, Haferkamp I, Neuhaus HE.

Plant Physiol. 2019 Feb;179(2):569-587. doi: 10.1104/pp.18.01036. Epub 2018 Nov 27.


New Aspects on Listeria monocytogenes ST5-ECVI Predominance in a Heavily Contaminated Cheese Processing Environment.

Muhterem-Uyar M, Ciolacu L, Wagner KH, Wagner M, Schmitz-Esser S, Stessl B.

Front Microbiol. 2018 Feb 1;9:64. doi: 10.3389/fmicb.2018.00064. eCollection 2018.


Metatranscriptome Sequencing Reveals Insights into the Gene Expression and Functional Potential of Rumen Wall Bacteria.

Mann E, Wetzels SU, Wagner M, Zebeli Q, Schmitz-Esser S.

Front Microbiol. 2018 Jan 23;9:43. doi: 10.3389/fmicb.2018.00043. eCollection 2018.


Age-associated microbiome shows the giant panda lives on hemicelluloses, not on cellulose.

Zhang W, Liu W, Hou R, Zhang L, Schmitz-Esser S, Sun H, Xie J, Zhang Y, Wang C, Li L, Yue B, Huang H, Wang H, Shen F, Zhang Z.

ISME J. 2018 May;12(5):1319-1328. doi: 10.1038/s41396-018-0051-y. Epub 2018 Feb 1.


Autochthonous facility-specific microbiota dominates washed-rind Austrian hard cheese surfaces and its production environment.

Quijada NM, Mann E, Wagner M, Rodríguez-Lázaro D, Hernández M, Schmitz-Esser S.

Int J Food Microbiol. 2018 Feb 21;267:54-61. doi: 10.1016/j.ijfoodmicro.2017.12.025. Epub 2017 Dec 28.


Abundance and potential contribution of Gram-negative cheese rind bacteria from Austrian artisanal hard cheeses.

Schmitz-Esser S, Dzieciol M, Nischler E, Schornsteiner E, Bereuter O, Mann E, Wagner M.

Int J Food Microbiol. 2018 Feb 2;266:95-103. doi: 10.1016/j.ijfoodmicro.2017.11.013. Epub 2017 Nov 26.


Transcriptome Sequencing Reveals Novel Candidate Genes for Cardinium hertigii-Caused Cytoplasmic Incompatibility and Host-Cell Interaction.

Mann E, Stouthamer CM, Kelly SE, Dzieciol M, Hunter MS, Schmitz-Esser S.

mSystems. 2017 Nov 21;2(6). pii: e00141-17. doi: 10.1128/mSystems.00141-17. eCollection 2017 Nov-Dec.


Intestinal microbiota profiles associated with low and high residual feed intake in chickens across two geographical locations.

Siegerstetter SC, Schmitz-Esser S, Magowan E, Wetzels SU, Zebeli Q, Lawlor PG, O'Connell NE, Metzler-Zebeli BU.

PLoS One. 2017 Nov 15;12(11):e0187766. doi: 10.1371/journal.pone.0187766. eCollection 2017.


Biphasic Metabolism and Host Interaction of a Chlamydial Symbiont.

König L, Siegl A, Penz T, Haider S, Wentrup C, Polzin J, Mann E, Schmitz-Esser S, Domman D, Horn M.

mSystems. 2017 May 30;2(3). pii: e00202-16. doi: 10.1128/mSystems.00202-16. eCollection 2017 May-Jun.


Comparative genomics of human and non-human Listeria monocytogenes sequence type 121 strains.

Rychli K, Wagner EM, Ciolacu L, Zaiser A, Tasara T, Wagner M, Schmitz-Esser S.

PLoS One. 2017 May 4;12(5):e0176857. doi: 10.1371/journal.pone.0176857. eCollection 2017.


Epimural bacterial community structure in the rumen of Holstein cows with different responses to a long-term subacute ruminal acidosis diet challenge.

Wetzels SU, Mann E, Pourazad P, Qumar M, Pinior B, Metzler-Zebeli BU, Wagner M, Schmitz-Esser S, Zebeli Q.

J Dairy Sci. 2017 Mar;100(3):1829-1844. doi: 10.3168/jds.2016-11620. Epub 2016 Dec 29.


Age-Related Differences in the Luminal and Mucosa-Associated Gut Microbiome of Broiler Chickens and Shifts Associated with Campylobacter jejuni Infection.

Awad WA, Mann E, Dzieciol M, Hess C, Schmitz-Esser S, Wagner M, Hess M.

Front Cell Infect Microbiol. 2016 Nov 22;6:154. eCollection 2016.


Shuttling of (deoxy-) purine nucleotides between compartments of the diatom Phaeodactylum tricornutum.

Chu L, Gruber A, Ast M, Schmitz-Esser S, Altensell J, Neuhaus HE, Kroth PG, Haferkamp I.

New Phytol. 2017 Jan;213(1):193-205. doi: 10.1111/nph.14126. Epub 2016 Aug 9.


A clinical Acanthamoeba isolate harboring two distinct bacterial endosymbionts.

Müller A, Walochnik J, Wagner M, Schmitz-Esser S.

Eur J Protistol. 2016 Oct;56:21-25. doi: 10.1016/j.ejop.2016.04.002. Epub 2016 Apr 13.


Epimural Indicator Phylotypes of Transiently-Induced Subacute Ruminal Acidosis in Dairy Cattle.

Wetzels SU, Mann E, Metzler-Zebeli BU, Pourazad P, Qumar M, Klevenhusen F, Pinior B, Wagner M, Zebeli Q, Schmitz-Esser S.

Front Microbiol. 2016 Mar 4;7:274. doi: 10.3389/fmicb.2016.00274. eCollection 2016.


Psychrophile spoilers dominate the bacterial microbiome in musculature samples of slaughter pigs.

Mann E, Wetzels SU, Pinior B, Metzler-Zebeli BU, Wagner M, Schmitz-Esser S.

Meat Sci. 2016 Jul;117:36-40. doi: 10.1016/j.meatsci.2016.02.034. Epub 2016 Feb 24.


Bacterial diversity of floor drain biofilms and drain waters in a Listeria monocytogenes contaminated food processing environment.

Dzieciol M, Schornsteiner E, Muhterem-Uyar M, Stessl B, Wagner M, Schmitz-Esser S.

Int J Food Microbiol. 2016 Apr 16;223:33-40. doi: 10.1016/j.ijfoodmicro.2016.02.004. Epub 2016 Feb 6.


The Metabolically Active Bacterial Microbiome of Tonsils and Mandibular Lymph Nodes of Slaughter Pigs.

Mann E, Pinior B, Wetzels SU, Metzler-Zebeli BU, Wagner M, Schmitz-Esser S.

Front Microbiol. 2015 Dec 15;6:1362. doi: 10.3389/fmicb.2015.01362. eCollection 2015.


Exoproteome analysis reveals higher abundance of proteins linked to alkaline stress in persistent Listeria monocytogenes strains.

Rychli K, Grunert T, Ciolacu L, Zaiser A, Razzazi-Fazeli E, Schmitz-Esser S, Ehling-Schulz M, Wagner M.

Int J Food Microbiol. 2016 Feb 2;218:17-26. doi: 10.1016/j.ijfoodmicro.2015.11.002. Epub 2015 Nov 10.


Adaptation of the cecal bacterial microbiome of growing pigs in response to resistant starch type 4.

Metzler-Zebeli BU, Schmitz-Esser S, Mann E, Grüll D, Molnar T, Zebeli Q.

Appl Environ Microbiol. 2015 Dec;81(24):8489-99. doi: 10.1128/AEM.02756-15. Epub 2015 Oct 2.


High diversity of viable bacteria isolated from lymph nodes of slaughter pigs and its possible impacts for food safety.

Mann E, Dzieciol M, Pinior B, Neubauer V, Metzler-Zebeli BU, Wagner M, Schmitz-Esser S.

J Appl Microbiol. 2015 Nov;119(5):1420-32. doi: 10.1111/jam.12933. Epub 2015 Oct 2.


Pyrosequencing reveals shifts in the bacterial epimural community relative to dietary concentrate amount in goats.

Wetzels SU, Mann E, Metzler-Zebeli BU, Wagner M, Klevenhusen F, Zebeli Q, Schmitz-Esser S.

J Dairy Sci. 2015 Aug;98(8):5572-87. doi: 10.3168/jds.2014-9166. Epub 2015 Jun 4.


Genomes of sequence type 121 Listeria monocytogenes strains harbor highly conserved plasmids and prophages.

Schmitz-Esser S, Müller A, Stessl B, Wagner M.

Front Microbiol. 2015 Apr 28;6:380. doi: 10.3389/fmicb.2015.00380. eCollection 2015.


Complete Genome Sequence of the Persistent Listeria monocytogenes Strain R479a.

Schmitz-Esser S, Gram L, Wagner M.

Genome Announc. 2015 Mar 19;3(2). pii: e00150-15. doi: 10.1128/genomeA.00150-15.


Characterization of mucosa-associated bacterial communities in abomasal ulcers by pyrosequencing.

Hund A, Dzieciol M, Schmitz-Esser S, Wittek T.

Vet Microbiol. 2015 May 15;177(1-2):132-41. doi: 10.1016/j.vetmic.2015.02.023. Epub 2015 Mar 2.


Dietary calcium concentration and cereals differentially affect mineral balance and tight junction proteins expression in jejunum of weaned pigs.

Metzler-Zebeli BU, Mann E, Ertl R, Schmitz-Esser S, Wagner M, Klein D, Ritzmann M, Zebeli Q.

Br J Nutr. 2015 Apr 14;113(7):1019-31. doi: 10.1017/S0007114515000380. Epub 2015 Mar 12.


Pyrosequencing reveals diverse fecal microbiota in Simmental calves during early development.

Klein-Jöbstl D, Schornsteiner E, Mann E, Wagner M, Drillich M, Schmitz-Esser S.

Front Microbiol. 2014 Nov 17;5:622. doi: 10.3389/fmicb.2014.00622. eCollection 2014.


The Listeria monocytogenes transposon Tn6188 provides increased tolerance to various quaternary ammonium compounds and ethidium bromide.

Müller A, Rychli K, Zaiser A, Wieser C, Wagner M, Schmitz-Esser S.

FEMS Microbiol Lett. 2014 Dec;361(2):166-73. doi: 10.1111/1574-6968.12626. Epub 2014 Oct 31.


Symbiont-driven sulfur crystal formation in a thiotrophic symbiosis from deep-sea hydrocarbon seeps.

Eichinger I, Schmitz-Esser S, Schmid M, Fisher CR, Bright M.

Environ Microbiol Rep. 2014 Aug;6(4):364-72. doi: 10.1111/1758-2229.12149. Epub 2014 Mar 3.


Cultivation-independent analysis of microbial communities on Austrian raw milk hard cheese rinds.

Schornsteiner E, Mann E, Bereuter O, Wagner M, Schmitz-Esser S.

Int J Food Microbiol. 2014 Jun 16;180:88-97. doi: 10.1016/j.ijfoodmicro.2014.04.010. Epub 2014 Apr 13.


Genome sequencing of Listeria monocytogenes.

Schmitz-Esser S, Wagner M.

Methods Mol Biol. 2014;1157:223-32. doi: 10.1007/978-1-4939-0703-8_19.


Transcriptome analysis of Listeria monocytogenes exposed to biocide stress reveals a multi-system response involving cell wall synthesis, sugar uptake, and motility.

Casey A, Fox EM, Schmitz-Esser S, Coffey A, McAuliffe O, Jordan K.

Front Microbiol. 2014 Feb 28;5:68. doi: 10.3389/fmicb.2014.00068. eCollection 2014.


Genome sequencing of Listeria monocytogenes "Quargel" listeriosis outbreak strains reveals two different strains with distinct in vitro virulence potential.

Rychli K, Müller A, Zaiser A, Schoder D, Allerberger F, Wagner M, Schmitz-Esser S.

PLoS One. 2014 Feb 26;9(2):e89964. doi: 10.1371/journal.pone.0089964. eCollection 2014.


Mucosa-associated bacterial microbiome of the gastrointestinal tract of weaned pigs and dynamics linked to dietary calcium-phosphorus.

Mann E, Schmitz-Esser S, Zebeli Q, Wagner M, Ritzmann M, Metzler-Zebeli BU.

PLoS One. 2014 Jan 23;9(1):e86950. doi: 10.1371/journal.pone.0086950. eCollection 2014.


Microbiomes of unreactive and pathologically altered ileocecal lymph nodes of slaughter pigs.

Mann E, Dzieciol M, Metzler-Zebeli BU, Wagner M, Schmitz-Esser S.

Appl Environ Microbiol. 2014 Jan;80(1):193-203. doi: 10.1128/AEM.03089-13. Epub 2013 Oct 18.


Tn6188 - a novel transposon in Listeria monocytogenes responsible for tolerance to benzalkonium chloride.

Müller A, Rychli K, Muhterem-Uyar M, Zaiser A, Stessl B, Guinane CM, Cotter PD, Wagner M, Schmitz-Esser S.

PLoS One. 2013 Oct 2;8(10):e76835. doi: 10.1371/journal.pone.0076835. eCollection 2013.


Changing dietary calcium-phosphorus level and cereal source selectively alters abundance of bacteria and metabolites in the upper gastrointestinal tracts of weaned pigs.

Metzler-Zebeli BU, Mann E, Schmitz-Esser S, Wagner M, Ritzmann M, Zebeli Q.

Appl Environ Microbiol. 2013 Dec;79(23):7264-72. doi: 10.1128/AEM.02691-13. Epub 2013 Sep 13.


The endosymbiont Amoebophilus asiaticus encodes an S-adenosylmethionine carrier that compensates for its missing methylation cycle.

Haferkamp I, Penz T, Geier M, Ast M, Mushak T, Horn M, Schmitz-Esser S.

J Bacteriol. 2013 Jul;195(14):3183-92. doi: 10.1128/JB.00195-13. Epub 2013 May 10.


Grain-rich diets differently alter ruminal and colonic abundance of microbial populations and lipopolysaccharide in goats.

Metzler-Zebeli BU, Schmitz-Esser S, Klevenhusen F, Podstatzky-Lichtenstein L, Wagner M, Zebeli Q.

Anaerobe. 2013 Apr;20:65-73. doi: 10.1016/j.anaerobe.2013.02.005. Epub 2013 Mar 5.


Comparative genomics suggests an independent origin of cytoplasmic incompatibility in Cardinium hertigii.

Penz T, Schmitz-Esser S, Kelly SE, Cass BN, Müller A, Woyke T, Malfatti SA, Hunter MS, Horn M.

PLoS Genet. 2012;8(10):e1003012. doi: 10.1371/journal.pgen.1003012. Epub 2012 Oct 25.


The plant mitochondrial carrier family: functional and evolutionary aspects.

Haferkamp I, Schmitz-Esser S.

Front Plant Sci. 2012 Jan 18;3:2. doi: 10.3389/fpls.2012.00002. eCollection 2012.


Bacteriocyte-associated gammaproteobacterial symbionts of the Adelges nordmannianae/piceae complex (Hemiptera: Adelgidae).

Toenshoff ER, Penz T, Narzt T, Collingro A, Schmitz-Esser S, Pfeiffer S, Klepal W, Wagner M, Weinmaier T, Rattei T, Horn M.

ISME J. 2012 Feb;6(2):384-96. doi: 10.1038/ismej.2011.102. Epub 2011 Aug 11.

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