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Items: 17

1.

Interspecific introgression mediates adaptation to whole genome duplication.

Marburger S, Monnahan P, Seear PJ, Martin SH, Koch J, Paajanen P, Bohutínská M, Higgins JD, Schmickl R, Yant L.

Nat Commun. 2019 Nov 18;10(1):5218. doi: 10.1038/s41467-019-13159-5.

2.

An empirical assessment of a single family-wide hybrid capture locus set at multiple evolutionary timescales in Asteraceae.

Jones KE, Fér T, Schmickl RE, Dikow RB, Funk VA, Herrando-Moraira S, Johnston PR, Kilian N, Siniscalchi CM, Susanna A, Slovák M, Thapa R, Watson LE, Mandel JR.

Appl Plant Sci. 2019 Oct 25;7(10):e11295. doi: 10.1002/aps3.11295. eCollection 2019 Oct.

3.

Pervasive population genomic consequences of genome duplication in Arabidopsis arenosa.

Monnahan P, Kolář F, Baduel P, Sailer C, Koch J, Horvath R, Laenen B, Schmickl R, Paajanen P, Šrámková G, Bohutínská M, Arnold B, Weisman CM, Marhold K, Slotte T, Bomblies K, Yant L.

Nat Ecol Evol. 2019 Mar;3(3):457-468. doi: 10.1038/s41559-019-0807-4. Epub 2019 Feb 25.

PMID:
30804518
4.

Resolving the rapid plant radiation of early diverging lineages in the tropical Zingiberales: Pushing the limits of genomic data.

Carlsen MM, Fér T, Schmickl R, Leong-Škorničková J, Newman M, Kress WJ.

Mol Phylogenet Evol. 2018 Nov;128:55-68. doi: 10.1016/j.ympev.2018.07.020. Epub 2018 Jul 29.

PMID:
30063997
5.

HybPhyloMaker: Target Enrichment Data Analysis From Raw Reads to Species Trees.

Fér T, Schmickl RE.

Evol Bioinform Online. 2018 Jan 12;14:1176934317742613. doi: 10.1177/1176934317742613. eCollection 2018.

6.

Hybrids and horizontal transfer: introgression allows adaptive allele discovery.

Schmickl R, Marburger S, Bray S, Yant L.

J Exp Bot. 2017 Nov 28;68(20):5453-5470. doi: 10.1093/jxb/erx297. Review.

PMID:
29096001
7.

Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae).

Schmickl R, Liston A, Zeisek V, Oberlander K, Weitemier K, Straub SC, Cronn RC, Dreyer LL, Suda J.

Mol Ecol Resour. 2016 Sep;16(5):1124-35. doi: 10.1111/1755-0998.12487. Epub 2015 Dec 15.

PMID:
26577756
8.

Exogenous selection rather than cytonuclear incompatibilities shapes asymmetrical fitness of reciprocal Arabidopsis hybrids.

Muir G, Ruiz-Duarte P, Hohmann N, Mable BK, Novikova P, Schmickl R, Guggisberg A, Koch MA.

Ecol Evol. 2015 Apr;5(8):1734-45. doi: 10.1002/ece3.1474. Epub 2015 Mar 25.

9.

Taming the wild: resolving the gene pools of non-model Arabidopsis lineages.

Hohmann N, Schmickl R, Chiang TY, Lučanová M, Kolář F, Marhold K, Koch MA.

BMC Evol Biol. 2014 Oct 27;14:224. doi: 10.1186/s12862-014-0224-x.

10.

Hyb-Seq: Combining target enrichment and genome skimming for plant phylogenomics.

Weitemier K, Straub SC, Cronn RC, Fishbein M, Schmickl R, McDonnell A, Liston A.

Appl Plant Sci. 2014 Aug 29;2(9). pii: apps.1400042. doi: 10.3732/apps.1400042. eCollection 2014 Sep.

11.

BrassiBase: introduction to a novel knowledge database on Brassicaceae evolution.

Kiefer M, Schmickl R, German DA, Mandáková T, Lysak MA, Al-Shehbaz IA, Franzke A, Mummenhoff K, Stamatakis A, Koch MA.

Plant Cell Physiol. 2014 Jan;55(1):e3. doi: 10.1093/pcp/pct158. Epub 2013 Nov 19.

PMID:
24259684
12.

The evolutionary history of the Arabidopsis arenosa complex: diverse tetraploids mask the Western Carpathian center of species and genetic diversity.

Schmickl R, Paule J, Klein J, Marhold K, Koch MA.

PLoS One. 2012;7(8):e42691. doi: 10.1371/journal.pone.0042691. Epub 2012 Aug 3.

13.

Interspecific and interploidal gene flow in Central European Arabidopsis (Brassicaceae).

Jørgensen MH, Ehrich D, Schmickl R, Koch MA, Brysting AK.

BMC Evol Biol. 2011 Nov 29;11:346. doi: 10.1186/1471-2148-11-346.

14.

Arabidopsis hybrid speciation processes.

Schmickl R, Koch MA.

Proc Natl Acad Sci U S A. 2011 Aug 23;108(34):14192-7. doi: 10.1073/pnas.1104212108. Epub 2011 Aug 8.

15.
16.

Brefeldin A action and recovery in Chlamydomonas are rapid and involve fusion and fission of Golgi cisternae.

Hummel E, Schmickl R, Hinz G, Hillmer S, Robinson DG.

Plant Biol (Stuttg). 2007 Jul;9(4):489-501. Epub 2007 Feb 15.

PMID:
17301935
17.

Supernetwork identifies multiple events of plastid trnF(GAA) pseudogene evolution in the Brassicaceae.

Koch MA, Dobes C, Kiefer C, Schmickl R, Klimes L, Lysak MA.

Mol Biol Evol. 2007 Jan;24(1):63-73. Epub 2006 Sep 20.

PMID:
16987951

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