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Items: 43

1.

Soybeans Grown with Carbonaceous Nanomaterials Maintain Nitrogen Stoichiometry by Assimilating Soil Nitrogen to Offset Impaired Dinitrogen Fixation.

Wang Y, Schimel JP, Nisbet RM, Gardea-Torresdey JL, Holden PA.

ACS Nano. 2020 Jan 28;14(1):585-594. doi: 10.1021/acsnano.9b06970. Epub 2019 Dec 18.

PMID:
31825596
2.

Limited effects of early snowmelt on plants, decomposers, and soil nutrients in Arctic tundra soils.

Darrouzet-Nardi A, Steltzer H, Sullivan PF, Segal A, Koltz AM, Livensperger C, Schimel JP, Weintraub MN.

Ecol Evol. 2019 Jan 24;9(4):1820-1844. doi: 10.1002/ece3.4870. eCollection 2019 Feb.

3.

Understanding how microbiomes influence the systems they inhabit.

Hall EK, Bernhardt ES, Bier RL, Bradford MA, Boot CM, Cotner JB, Del Giorgio PA, Evans SE, Graham EB, Jones SE, Lennon JT, Locey KJ, Nemergut D, Osborne BB, Rocca JD, Schimel JP, Waldrop MP, Wallenstein MD.

Nat Microbiol. 2018 Sep;3(9):977-982. doi: 10.1038/s41564-018-0201-z. Epub 2018 Aug 24. Review.

PMID:
30143799
4.

Effects of altered dry season length and plant inputs on soluble soil carbon.

Homyak PM, Blankinship JC, Slessarev EW, Schaeffer SM, Manzoni S, Schimel JP.

Ecology. 2018 Oct;99(10):2348-2362. doi: 10.1002/ecy.2473. Epub 2018 Aug 21.

PMID:
30047578
5.

Carbonaceous Nanomaterials Have Higher Effects on Soybean Rhizosphere Prokaryotic Communities During the Reproductive Growth Phase than During Vegetative Growth.

Ge Y, Shen C, Wang Y, Sun YQ, Schimel JP, Gardea-Torresdey JL, Holden PA.

Environ Sci Technol. 2018 Jun 5;52(11):6636-6646. doi: 10.1021/acs.est.8b00937. Epub 2018 May 15.

PMID:
29719150
6.

The importance of anabolism in microbial control over soil carbon storage.

Liang C, Schimel JP, Jastrow JD.

Nat Microbiol. 2017 Jul 25;2:17105. doi: 10.1038/nmicrobiol.2017.105. No abstract available.

PMID:
28741607
7.

Agglomeration Determines Effects of Carbonaceous Nanomaterials on Soybean Nodulation, Dinitrogen Fixation Potential, and Growth in Soil.

Wang Y, Chang CH, Ji Z, Bouchard DC, Nisbet RM, Schimel JP, Gardea-Torresdey JL, Holden PA.

ACS Nano. 2017 Jun 27;11(6):5753-5765. doi: 10.1021/acsnano.7b01337. Epub 2017 Jun 15.

8.

Shrub encroachment in Arctic tundra: Betula nana effects on above- and belowground litter decomposition.

McLaren JR, Buckeridge KM, van de Weg MJ, Shaver GR, Schimel JP, Gough L.

Ecology. 2017 May;98(5):1361-1376. doi: 10.1002/ecy.1790. Epub 2017 Apr 7.

PMID:
28263375
9.

Damage assessment for soybean cultivated in soil with either CeO2 or ZnO manufactured nanomaterials.

Priester JH, Moritz SC, Espinosa K, Ge Y, Wang Y, Nisbet RM, Schimel JP, Susana Goggi A, Gardea-Torresdey JL, Holden PA.

Sci Total Environ. 2017 Feb 1;579:1756-1768. doi: 10.1016/j.scitotenv.2016.11.149. Epub 2016 Dec 6.

PMID:
27939199
10.

Water balance creates a threshold in soil pH at the global scale.

Slessarev EW, Lin Y, Bingham NL, Johnson JE, Dai Y, Schimel JP, Chadwick OA.

Nature. 2016 Dec 22;540(7634):567-569. doi: 10.1038/nature20139. Epub 2016 Nov 21.

11.

Acidity and organic matter promote abiotic nitric oxide production in drying soils.

Homyak PM, Kamiyama M, Sickman JO, Schimel JP.

Glob Chang Biol. 2017 Apr;23(4):1735-1747. doi: 10.1111/gcb.13507. Epub 2016 Oct 26.

PMID:
27643755
12.

Aridity and plant uptake interact to make dryland soils hotspots for nitric oxide (NO) emissions.

Homyak PM, Blankinship JC, Marchus K, Lucero DM, Sickman JO, Schimel JP.

Proc Natl Acad Sci U S A. 2016 May 10;113(19):E2608-16. doi: 10.1073/pnas.1520496113. Epub 2016 Apr 25.

13.

Long-Term Effects of Multiwalled Carbon Nanotubes and Graphene on Microbial Communities in Dry Soil.

Ge Y, Priester JH, Mortimer M, Chang CH, Ji Z, Schimel JP, Holden PA.

Environ Sci Technol. 2016 Apr 5;50(7):3965-74. doi: 10.1021/acs.est.5b05620. Epub 2016 Mar 24.

PMID:
26962674
14.

Linking microbial community structure and microbial processes: an empirical and conceptual overview.

Bier RL, Bernhardt ES, Boot CM, Graham EB, Hall EK, Lennon JT, Nemergut DR, Osborne BB, Ruiz-González C, Schimel JP, Waldrop MP, Wallenstein MD.

FEMS Microbiol Ecol. 2015 Oct;91(10). pii: fiv113. doi: 10.1093/femsec/fiv113. Epub 2015 Sep 13. Review.

PMID:
26371074
15.

Soybean plants modify metal oxide nanoparticle effects on soil bacterial communities.

Ge Y, Priester JH, Van De Werfhorst LC, Walker SL, Nisbet RM, An YJ, Schimel JP, Gardea-Torresdey JL, Holden PA.

Environ Sci Technol. 2014 Nov 18;48(22):13489-96. doi: 10.1021/es5031646. Epub 2014 Nov 10.

PMID:
25354168
16.

Analysis of run-to-run variation of bar-coded pyrosequencing for evaluating bacterial community shifts and individual taxa dynamics.

Ge Y, Schimel JP, Holden PA.

PLoS One. 2014 Jun 9;9(6):e99414. doi: 10.1371/journal.pone.0099414. eCollection 2014.

17.

Five reasons to use bacteria when assessing manufactured nanomaterial environmental hazards and fates.

Holden PA, Schimel JP, Godwin HA.

Curr Opin Biotechnol. 2014 Jun;27:73-8. doi: 10.1016/j.copbio.2013.11.008. Epub 2013 Dec 15. Review.

PMID:
24863899
18.

Substrate and environmental controls on microbial assimilation of soil organic carbon: a framework for Earth system models.

Xu X, Schimel JP, Thornton PE, Song X, Yuan F, Goswami S.

Ecol Lett. 2014 May;17(5):547-55. doi: 10.1111/ele.12254. Epub 2014 Feb 16.

PMID:
24529215
19.

Potential mechanisms and environmental controls of TiO2 nanoparticle effects on soil bacterial communities.

Ge Y, Priester JH, Van De Werfhorst LC, Schimel JP, Holden PA.

Environ Sci Technol. 2013 Dec 17;47(24):14411-7. doi: 10.1021/es403385c. Epub 2013 Nov 27.

PMID:
24256577
20.

Soil-plant N processes in a High Arctic ecosystem, NW Greenland are altered by long-term experimental warming and higher rainfall.

Schaeffer SM, Sharp E, Schimel JP, Welker JM.

Glob Chang Biol. 2013 Nov;19(11):3529-39. doi: 10.1111/gcb.12318. Epub 2013 Sep 11.

PMID:
23843128
21.

Long-term warming restructures Arctic tundra without changing net soil carbon storage.

Sistla SA, Moore JC, Simpson RT, Gough L, Shaver GR, Schimel JP.

Nature. 2013 May 30;497(7451):615-8. doi: 10.1038/nature12129. Epub 2013 May 15.

PMID:
23676669
22.

Cloud shading and fog drip influence the metabolism of a coastal pine ecosystem.

Carbone MS, Park Williams A, Ambrose AR, Boot CM, Bradley ES, Dawson TE, Schaeffer SM, Schimel JP, Still CJ.

Glob Chang Biol. 2013 Feb;19(2):484-97. doi: 10.1111/gcb.12054. Epub 2012 Nov 7.

PMID:
23504786
23.

Microbial control over carbon cycling in soil.

Schimel JP, Schaeffer SM.

Front Microbiol. 2012 Sep 26;3:348. doi: 10.3389/fmicb.2012.00348. eCollection 2012.

24.

Ecological nanotoxicology: integrating nanomaterial hazard considerations across the subcellular, population, community, and ecosystems levels.

Holden PA, Nisbet RM, Lenihan HS, Miller RJ, Cherr GN, Schimel JP, Gardea-Torresdey JL.

Acc Chem Res. 2013 Mar 19;46(3):813-22. doi: 10.1021/ar300069t. Epub 2012 Oct 5.

PMID:
23039211
25.

Stoichiometric flexibility as a regulator of carbon and nutrient cycling in terrestrial ecosystems under change.

Sistla SA, Schimel JP.

New Phytol. 2012 Oct;196(1):68-78. doi: 10.1111/j.1469-8137.2012.04234.x. Epub 2012 Jul 27. Review.

26.

Soybean susceptibility to manufactured nanomaterials with evidence for food quality and soil fertility interruption.

Priester JH, Ge Y, Mielke RE, Horst AM, Moritz SC, Espinosa K, Gelb J, Walker SL, Nisbet RM, An YJ, Schimel JP, Palmer RG, Hernandez-Viezcas JA, Zhao L, Gardea-Torresdey JL, Holden PA.

Proc Natl Acad Sci U S A. 2012 Sep 11;109(37):E2451-6. doi: 10.1073/pnas.1205431109. Epub 2012 Aug 20.

27.

Identification of soil bacteria susceptible to TiO2 and ZnO nanoparticles.

Ge Y, Schimel JP, Holden PA.

Appl Environ Microbiol. 2012 Sep;78(18):6749-58. doi: 10.1128/AEM.00941-12. Epub 2012 Jul 13.

28.

Responses of soil microbial communities to water stress: results from a meta-analysis.

Manzoni S, Schimel JP, Porporato A.

Ecology. 2012 Apr;93(4):930-8.

PMID:
22690643
29.

Seasonal and episodic moisture controls on plant and microbial contributions to soil respiration.

Carbone MS, Still CJ, Ambrose AR, Dawson TE, Williams AP, Boot CM, Schaeffer SM, Schimel JP.

Oecologia. 2011 Sep;167(1):265-78. doi: 10.1007/s00442-011-1975-3. Epub 2011 Apr 13.

PMID:
21487825
30.

Evidence for negative effects of TiO2 and ZnO nanoparticles on soil bacterial communities.

Ge Y, Schimel JP, Holden PA.

Environ Sci Technol. 2011 Feb 15;45(4):1659-64. doi: 10.1021/es103040t. Epub 2011 Jan 5.

PMID:
21207975
31.

Pushing the limits for amplifying BrdU-labeled DNA encoding 16S rRNA: DNA polymerase as the determining factor.

Roux-Michollet DD, Schimel JP, Holden PA.

J Microbiol Methods. 2010 Dec;83(3):312-6. doi: 10.1016/j.mimet.2010.09.016. Epub 2010 Sep 29.

PMID:
20883730
32.

The ecological coherence of high bacterial taxonomic ranks.

Philippot L, Andersson SG, Battin TJ, Prosser JI, Schimel JP, Whitman WB, Hallin S.

Nat Rev Microbiol. 2010 Jul;8(7):523-9. doi: 10.1038/nrmicro2367. Review.

PMID:
20531276
33.

Understanding and eliminating iron interference in colorimetric nitrate and nitrite analysis.

Colman BP, Schimel JP.

Environ Monit Assess. 2010 Jun;165(1-4):633-41. doi: 10.1007/s10661-009-0974-x. Epub 2009 Jun 3. Erratum in: Environ Monit Assess. 2010 Jun;165(1-4):693. Schimel, Joshua P [added].

PMID:
19496004
34.

Microbial growth in Arctic tundra soil at -2°C.

McMahon SK, Wallenstein MD, Schimel JP.

Environ Microbiol Rep. 2009 Apr;1(2):162-6. doi: 10.1111/j.1758-2229.2009.00025.x. Epub 2009 Mar 6.

PMID:
23765747
35.

Role of land-surface changes in arctic summer warming.

Chapin FS 3rd, Sturm M, Serreze MC, McFadden JP, Key JR, Lloyd AH, McGuire AD, Rupp TS, Lynch AH, Schimel JP, Beringer J, Chapman WL, Epstein HE, Euskirchen ES, Hinzman LD, Jia G, Ping CL, Tape KD, Thompson CD, Walker DA, Welker JM.

Science. 2005 Oct 28;310(5748):657-60. Epub 2005 Sep 22.

37.

Influence of drying-rewetting frequency on soil bacterial community structure.

Fierer N, Schimel JP, Holden PA.

Microb Ecol. 2003 Jan;45(1):63-71. Epub 2002 Dec 10.

PMID:
12469245
38.

Decomposition and carbon cycling of dead trees in tropical forests of the central Amazon.

Chambers JQ, Higuchi N, Schimel JP, Ferreira LV, Melack JM.

Oecologia. 2000 Feb;122(3):380-388. doi: 10.1007/s004420050044.

PMID:
28308289
39.
40.

Microbial reductive dechlorination of PCBs.

Tiedje JM, Quensen JF 3rd, Chee-Sanford J, Schimel JP, Boyd SA.

Biodegradation. 1993-1994;4(4):231-40. Review.

PMID:
7764920
41.

Changes in cytoplasmic carbon and nitrogen pools in a soil bacterium and a fungus in response to salt stress.

Schimel JP, Scott WJ, Killham K.

Appl Environ Microbiol. 1989 Jun;55(6):1635-7.

42.

Identification of heterotrophic nitrification in a sierran forest soil.

Schimel JP, Firestone MK, Killham KS.

Appl Environ Microbiol. 1984 Oct;48(4):802-6.

43.

Facile new synthesis and purification of 5,10-methenyl-tetrahydrofolate from folic acid.

Tatum CM, Fernald MG, Schimel JP.

Anal Biochem. 1980 Apr;103(2):255-7. No abstract available.

PMID:
7386860

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