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Items: 15


Mitigating Anticipated Effects of Systematic Errors Supports Sister-Group Relationship between Xenacoelomorpha and Ambulacraria.

Philippe H, Poustka AJ, Chiodin M, Hoff KJ, Dessimoz C, Tomiczek B, Schiffer PH, Müller S, Domman D, Horn M, Kuhl H, Timmermann B, Satoh N, Hikosaka-Katayama T, Nakano H, Rowe ML, Elphick MR, Thomas-Chollier M, Hankeln T, Mertes F, Wallberg A, Rast JP, Copley RR, Martinez P, Telford MJ.

Curr Biol. 2019 Jun 3;29(11):1818-1826.e6. doi: 10.1016/j.cub.2019.04.009. Epub 2019 May 16.


Fitness Landscape of the Fission Yeast Genome.

Grech L, Jeffares DC, Sadée CY, Rodríguez-López M, Bitton DA, Hoti M, Biagosch C, Aravani D, Speekenbrink M, Illingworth CJR, Schiffer PH, Pidoux AL, Tong P, Tallada VA, Allshire R, Levin HL, Bähler J.

Mol Biol Evol. 2019 Aug 1;36(8):1612-1623. doi: 10.1093/molbev/msz113.


The mitochondrial genomes of the mesozoans Intoshia linei, Dicyema sp. and Dicyema japonicum.

Robertson HE, Schiffer PH, Telford MJ.

Parasitol Open. 2018;4. pii: e16. doi: 10.1017/pao.2018.12. Epub 2018 Aug 2.


Orthonectids Are Highly Degenerate Annelid Worms.

Schiffer PH, Robertson HE, Telford MJ.

Curr Biol. 2018 Jun 18;28(12):1970-1974.e3. doi: 10.1016/j.cub.2018.04.088. Epub 2018 May 31.


The gene regulatory program of Acrobeloides nanus reveals conservation of phylum-specific expression.

Schiffer PH, Polsky AL, Cole AG, Camps JIR, Kroiher M, Silver DH, Grishkevich V, Anavy L, Koutsovoulos G, Hashimshony T, Yanai I.

Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):4459-4464. doi: 10.1073/pnas.1720817115. Epub 2018 Apr 6.


Evolutionary analysis indicates that DNA alkylation damage is a byproduct of cytosine DNA methyltransferase activity.

Rošić S, Amouroux R, Requena CE, Gomes A, Emperle M, Beltran T, Rane JK, Linnett S, Selkirk ME, Schiffer PH, Bancroft AJ, Grencis RK, Jeltsch A, Hajkova P, Sarkies P.

Nat Genet. 2018 Mar;50(3):452-459. doi: 10.1038/s41588-018-0061-8. Epub 2018 Feb 19.


Differences in the genetic control of early egg development and reproduction between C. elegans and its parthenogenetic relative D. coronatus.

Kraus C, Schiffer PH, Kagoshima H, Hiraki H, Vogt T, Kroiher M, Kohara Y, Schierenberg E.

Evodevo. 2017 Oct 18;8:16. doi: 10.1186/s13227-017-0081-y. eCollection 2017.


Genome analysis of Diploscapter coronatus: insights into molecular peculiarities of a nematode with parthenogenetic reproduction.

Hiraki H, Kagoshima H, Kraus C, Schiffer PH, Ueta Y, Kroiher M, Schierenberg E, Kohara Y.

BMC Genomics. 2017 Jun 24;18(1):478. doi: 10.1186/s12864-017-3860-x.


The mitochondrial genomes of the acoelomorph worms Paratomella rubra, Isodiametra pulchra and Archaphanostoma ylvae.

Robertson HE, Lapraz F, Egger B, Telford MJ, Schiffer PH.

Sci Rep. 2017 May 12;7(1):1847. doi: 10.1038/s41598-017-01608-4.


The cnidarian Hydractinia echinata employs canonical and highly adapted histones to pack its DNA.

Török A, Schiffer PH, Schnitzler CE, Ford K, Mullikin JC, Baxevanis AD, Bacic A, Frank U, Gornik SG.

Epigenetics Chromatin. 2016 Sep 6;9(1):36. doi: 10.1186/s13072-016-0085-1. eCollection 2016.


Ultra Large Gene Families: A Matter of Adaptation or Genomic Parasites?

Schiffer PH, Gravemeyer J, Rauscher M, Wiehe T.

Life (Basel). 2016 Aug 8;6(3). pii: E32. doi: 10.3390/life6030032.


Structure and evolutionary history of a large family of NLR proteins in the zebrafish.

Howe K, Schiffer PH, Zielinski J, Wiehe T, Laird GK, Marioni JC, Soylemez O, Kondrashov F, Leptin M.

Open Biol. 2016 Apr;6(4):160009. doi: 10.1098/rsob.160009. Epub 2016 Apr 27.


Developmental variations among Panagrolaimid nematodes indicate developmental system drift within a small taxonomic unit.

Schiffer PH, Nsah NA, Grotehusmann H, Kroiher M, Loer C, Schierenberg E.

Dev Genes Evol. 2014 Jun;224(3):183-8. doi: 10.1007/s00427-014-0471-2. Epub 2014 May 22.


The genome of Romanomermis culicivorax: revealing fundamental changes in the core developmental genetic toolkit in Nematoda.

Schiffer PH, Kroiher M, Kraus C, Koutsovoulos GD, Kumar S, Camps JI, Nsah NA, Stappert D, Morris K, Heger P, Altmüller J, Frommolt P, Nürnberg P, Thomas WK, Blaxter ML, Schierenberg E.

BMC Genomics. 2013 Dec 27;14:923. doi: 10.1186/1471-2164-14-923.


959 Nematode Genomes: a semantic wiki for coordinating sequencing projects.

Kumar S, Schiffer PH, Blaxter M.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1295-300. doi: 10.1093/nar/gkr826. Epub 2011 Nov 3.

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