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Items: 1 to 50 of 110

1.

Riding the wave of genomics to investigate aquatic coliphage diversity and activity.

Michniewski S, Redgwell T, Grigonyte A, Rihtman B, Aguilo-Ferretjans M, Christie-Oleza J, Jameson E, Scanlan DJ, Millard AD.

Environ Microbiol. 2019 Jun;21(6):2112-2128. doi: 10.1111/1462-2920.14590. Epub 2019 Apr 4.

PMID:
30884081
2.

Cyanophage MazG is a pyrophosphohydrolase but unable to hydrolyse magic spot nucleotides.

Rihtman B, Bowman-Grahl S, Millard A, Corrigan RM, Clokie MRJ, Scanlan DJ.

Environ Microbiol Rep. 2019 Jun;11(3):448-455. doi: 10.1111/1758-2229.12741. Epub 2019 Mar 20.

PMID:
30809954
3.

Identification of a cyanobacterial aldehyde dehydrogenase that produces retinoic acid in vitro.

Miles JA, Machattou P, Nevin-Jones D, Webb ME, Millard A, Scanlan DJ, Taylor PC.

Biochem Biophys Res Commun. 2019 Feb 26;510(1):27-34. doi: 10.1016/j.bbrc.2018.12.171. Epub 2019 Jan 17.

PMID:
30660368
4.

Elucidation of glutamine lipid biosynthesis in marine bacteria reveals its importance under phosphorus deplete growth in Rhodobacteraceae.

Smith AF, Rihtman B, Stirrup R, Silvano E, Mausz MA, Scanlan DJ, Chen Y.

ISME J. 2019 Jan;13(1):39-49. doi: 10.1038/s41396-018-0249-z. Epub 2018 Aug 14.

5.

Bacterial zinc uptake regulator proteins and their regulons.

Mikhaylina A, Ksibe AZ, Scanlan DJ, Blindauer CA.

Biochem Soc Trans. 2018 Aug 20;46(4):983-1001. doi: 10.1042/BST20170228. Epub 2018 Jul 31. Review.

6.

Manganese Is Essential for PlcP Metallophosphoesterase Activity Involved in Lipid Remodeling in Abundant Marine Heterotrophic Bacteria.

Wei T, Quareshy M, Zhang YZ, Scanlan DJ, Chen Y.

Appl Environ Microbiol. 2018 Jul 17;84(15). pii: e01109-18. doi: 10.1128/AEM.01109-18. Print 2018 Aug 1.

7.

Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria.

Grébert T, Doré H, Partensky F, Farrant GK, Boss ES, Picheral M, Guidi L, Pesant S, Scanlan DJ, Wincker P, Acinas SG, Kehoe DM, Garczarek L.

Proc Natl Acad Sci U S A. 2018 Feb 27;115(9):E2010-E2019. doi: 10.1073/pnas.1717069115. Epub 2018 Feb 12.

8.

Energy limitation of cyanophage development: implications for marine carbon cycling.

Puxty RJ, Evans DJ, Millard AD, Scanlan DJ.

ISME J. 2018 May;12(5):1273-1286. doi: 10.1038/s41396-017-0043-3. Epub 2018 Jan 29.

9.

Relative stability of ploidy in a marine Synechococcus across various growth conditions.

Perez-Sepulveda B, Pitt F, N'Guyen AN, Ratin M, Garczarek L, Millard A, Scanlan DJ.

Environ Microbiol Rep. 2018 Aug;10(4):428-432. doi: 10.1111/1758-2229.12614. Epub 2018 Feb 6.

PMID:
29327508
10.

Comparative Genomics of Bacteriophage of the Genus Seuratvirus.

Sazinas P, Redgwell T, Rihtman B, Grigonyte A, Michniewski S, Scanlan DJ, Hobman J, Millard A.

Genome Biol Evol. 2018 Jan 1;10(1):72-76. doi: 10.1093/gbe/evx275.

11.

Thermoacclimation and genome adaptation of the membrane lipidome in marine Synechococcus.

Pittera J, Jouhet J, Breton S, Garczarek L, Partensky F, Maréchal É, Nguyen NA, Doré H, Ratin M, Pitt FD, Scanlan DJ, Six C.

Environ Microbiol. 2018 Feb;20(2):612-631. doi: 10.1111/1462-2920.13985. Epub 2017 Dec 14.

PMID:
29124854
12.

Draft Genome Sequence of Bacteriophage vB_Eco_swan01.

Michniewski S, Redgwell T, Scanlan DJ, Millard AD.

Genome Announc. 2017 Jul 13;5(28). pii: e00501-17. doi: 10.1128/genomeA.00501-17.

13.

Distribution, Community Composition, and Potential Metabolic Activity of Bacterioplankton in an Urbanized Mediterranean Sea Coastal Zone.

Richa K, Balestra C, Piredda R, Benes V, Borra M, Passarelli A, Margiotta F, Saggiomo M, Biffali E, Sanges R, Scanlan DJ, Casotti R.

Appl Environ Microbiol. 2017 Aug 17;83(17). pii: e00494-17. doi: 10.1128/AEM.00494-17. Print 2017 Sep 1.

14.

Nutrient recycling facilitates long-term stability of marine microbial phototroph-heterotroph interactions.

Christie-Oleza JA, Sousoni D, Lloyd M, Armengaud J, Scanlan DJ.

Nat Microbiol. 2017 Jun 26;2:17100. doi: 10.1038/nmicrobiol.2017.100.

15.

Identification of extracellular glycerophosphodiesterases in Pseudomonas and their role in soil organic phosphorus remineralisation.

Lidbury IDEA, Murphy ARJ, Fraser TD, Bending GD, Jones AME, Moore JD, Goodall A, Tibbett M, Hammond JP, Scanlan DJ, Wellington EMH.

Sci Rep. 2017 May 19;7(1):2179. doi: 10.1038/s41598-017-02327-6.

16.

The 'known' genetic potential for microbial communities to degrade organic phosphorus is reduced in low-pH soils.

Lidbury IDEA, Fraser T, Murphy ARJ, Scanlan DJ, Bending GD, Jones AME, Moore JD, Goodall A, Tibbett M, Hammond JP, Wellington EMH.

Microbiologyopen. 2017 Aug;6(4). doi: 10.1002/mbo3.474. Epub 2017 Apr 16.

17.

Identification of dimethylamine monooxygenase in marine bacteria reveals a metabolic bottleneck in the methylated amine degradation pathway.

Lidbury I, Mausz MA, Scanlan DJ, Chen Y.

ISME J. 2017 Jul;11(7):1592-1601. doi: 10.1038/ismej.2017.31. Epub 2017 Mar 17.

18.

A Sample-to-Sequence Protocol for Genus Targeted Transcriptomic Profiling: Application to Marine Synechococcus.

Pitt FD, Millard A, Ostrowski M, Dervish S, Mazard S, Paulsen IT, Zubkov MV, Scanlan DJ.

Front Microbiol. 2016 Oct 14;7:1592. eCollection 2016.

19.

Marine phage genomics: the tip of the iceberg.

Perez Sepulveda B, Redgwell T, Rihtman B, Pitt F, Scanlan DJ, Millard A.

FEMS Microbiol Lett. 2016 Aug;363(15). pii: fnw158. doi: 10.1093/femsle/fnw158. Epub 2016 Jun 22. Review.

20.

Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria.

Farrant GK, Doré H, Cornejo-Castillo FM, Partensky F, Ratin M, Ostrowski M, Pitt FD, Wincker P, Scanlan DJ, Iudicone D, Acinas SG, Garczarek L.

Proc Natl Acad Sci U S A. 2016 Jun 14;113(24):E3365-74. doi: 10.1073/pnas.1524865113. Epub 2016 Jun 2.

21.

Viruses Inhibit CO2 Fixation in the Most Abundant Phototrophs on Earth.

Puxty RJ, Millard AD, Evans DJ, Scanlan DJ.

Curr Biol. 2016 Jun 20;26(12):1585-1589. doi: 10.1016/j.cub.2016.04.036. Epub 2016 Jun 9.

22.

Comparative genomic, proteomic and exoproteomic analyses of three Pseudomonas strains reveals novel insights into the phosphorus scavenging capabilities of soil bacteria.

Lidbury ID, Murphy AR, Scanlan DJ, Bending GD, Jones AM, Moore JD, Goodall A, Hammond JP, Wellington EM.

Environ Microbiol. 2016 Oct;18(10):3535-3549. doi: 10.1111/1462-2920.13390. Epub 2016 Jul 7.

23.

Cyanobacteria and Eukaryotic Algae Use Different Chemical Variants of Vitamin B12.

Helliwell KE, Lawrence AD, Holzer A, Kudahl UJ, Sasso S, Kräutler B, Scanlan DJ, Warren MJ, Smith AG.

Curr Biol. 2016 Apr 25;26(8):999-1008. doi: 10.1016/j.cub.2016.02.041. Epub 2016 Mar 31.

24.

Distinct Spatial Patterns of SAR11, SAR86, and Actinobacteria Diversity along a Transect in the Ultra-oligotrophic South Pacific Ocean.

West NJ, Lepère C, Manes CL, Catala P, Scanlan DJ, Lebaron P.

Front Microbiol. 2016 Mar 8;7:234. doi: 10.3389/fmicb.2016.00234. eCollection 2016.

25.

Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency.

Sebastián M, Smith AF, González JM, Fredricks HF, Van Mooy B, Koblížek M, Brandsma J, Koster G, Mestre M, Mostajir B, Pitta P, Postle AD, Sánchez P, Gasol JM, Scanlan DJ, Chen Y.

ISME J. 2016 Apr;10(4):968-78. doi: 10.1038/ismej.2015.172. Epub 2015 Nov 13.

26.

Contribution of cyanobacterial alkane production to the ocean hydrocarbon cycle.

Lea-Smith DJ, Biller SJ, Davey MP, Cotton CA, Perez Sepulveda BM, Turchyn AV, Scanlan DJ, Smith AG, Chisholm SW, Howe CJ.

Proc Natl Acad Sci U S A. 2015 Nov 3;112(44):13591-6. doi: 10.1073/pnas.1507274112. Epub 2015 Oct 5.

27.

In situ associations between marine photosynthetic picoeukaryotes and potential parasites - a role for fungi?

Lepère C, Ostrowski M, Hartmann M, Zubkov MV, Scanlan DJ.

Environ Microbiol Rep. 2016 Aug;8(4):445-51. doi: 10.1111/1758-2229.12339. Epub 2015 Dec 1.

PMID:
26420747
28.

Dominant oceanic bacteria secure phosphate using a large extracellular buffer.

Zubkov MV, Martin AP, Hartmann M, Grob C, Scanlan DJ.

Nat Commun. 2015 Jul 22;6:7878. doi: 10.1038/ncomms8878.

29.

Spontaneous Deletion of an "ORFanage" Region Facilitates Host Adaptation in a "Photosynthetic" Cyanophage.

Puxty RJ, Perez-Sepulveda B, Rihtman B, Evans DJ, Millard AD, Scanlan DJ.

PLoS One. 2015 Jul 15;10(7):e0132642. doi: 10.1371/journal.pone.0132642. eCollection 2015.

30.

Comparative genomics and mutagenesis analyses of choline metabolism in the marine Roseobacter clade.

Lidbury I, Kimberley G, Scanlan DJ, Murrell JC, Chen Y.

Environ Microbiol. 2015 Dec;17(12):5048-62. doi: 10.1111/1462-2920.12943. Epub 2015 Aug 4.

31.

"You produce while I clean up", a strategy revealed by exoproteomics during Synechococcus-Roseobacter interactions.

Christie-Oleza JA, Scanlan DJ, Armengaud J.

Proteomics. 2015 Oct;15(20):3454-62. doi: 10.1002/pmic.201400562. Epub 2015 Apr 21.

32.

Functional distinctness in the exoproteomes of marine Synechococcus.

Christie-Oleza JA, Armengaud J, Guerin P, Scanlan DJ.

Environ Microbiol. 2015 Oct;17(10):3781-94. doi: 10.1111/1462-2920.12822. Epub 2015 Apr 15.

33.

Genomic and proteomic characterization of two novel siphovirus infecting the sedentary facultative epibiont cyanobacterium Acaryochloris marina.

Chan YW, Millard AD, Wheatley PJ, Holmes AB, Mohr R, Whitworth AL, Mann NH, Larkum AW, Hess WR, Scanlan DJ, Clokie MR.

Environ Microbiol. 2015 Nov;17(11):4239-52. doi: 10.1111/1462-2920.12735. Epub 2015 Feb 11.

PMID:
25472545
34.

Shedding new light on viral photosynthesis.

Puxty RJ, Millard AD, Evans DJ, Scanlan DJ.

Photosynth Res. 2015 Oct;126(1):71-97. doi: 10.1007/s11120-014-0057-x. Epub 2014 Nov 9. Review.

PMID:
25381655
35.

Cell-specific CO2 fixation rates of two distinct groups of plastidic protists in the Atlantic Ocean remain unchanged after nutrient addition.

Grob C, Jardillier L, Hartmann M, Ostrowski M, Zubkov MV, Scanlan DJ.

Environ Microbiol Rep. 2015 Apr;7(2):211-8. doi: 10.1111/1758-2229.12228. Epub 2015 Jan 23.

PMID:
25345650
36.

Identification of major zinc-binding proteins from a marine cyanobacterium: insight into metal uptake in oligotrophic environments.

Barnett JP, Scanlan DJ, Blindauer CA.

Metallomics. 2014 Jul;6(7):1254-68. doi: 10.1039/c4mt00048j.

PMID:
24870224
37.

Development of a targeted metagenomic approach to study a genomic region involved in light harvesting in marine Synechococcus.

Humily F, Farrant GK, Marie D, Partensky F, Mazard S, Perennou M, Labadie K, Aury JM, Wincker P, Segui AN, Scanlan DJ, Garczarek L.

FEMS Microbiol Ecol. 2014 May;88(2):231-49. doi: 10.1111/1574-6941.12285. Epub 2014 Feb 24.

38.

Genetics. Being selective in the Prochlorococcus collective.

Bowler C, Scanlan DJ.

Science. 2014 Apr 25;344(6182):366-7. doi: 10.1126/science.1253817. No abstract available.

PMID:
24763577
39.

Efficient CO2 fixation by surface Prochlorococcus in the Atlantic Ocean.

Hartmann M, Gomez-Pereira P, Grob C, Ostrowski M, Scanlan DJ, Zubkov MV.

ISME J. 2014 Nov;8(11):2280-9. doi: 10.1038/ismej.2014.56. Epub 2014 Apr 24.

40.

Targeted genomics of flow cytometrically sorted cultured and uncultured microbial groups.

Mazard S, Ostrowski M, Holland R, Zubkov MV, Scanlan DJ.

Methods Mol Biol. 2014;1096:203-12. doi: 10.1007/978-1-62703-712-9_16.

PMID:
24515371
41.

A microarray for assessing transcription from pelagic marine microbial taxa.

Shilova IN, Robidart JC, James Tripp H, Turk-Kubo K, Wawrik B, Post AF, Thompson AW, Ward B, Hollibaugh JT, Millard A, Ostrowski M, Scanlan DJ, Paerl RW, Stuart R, Zehr JP.

ISME J. 2014 Jul;8(7):1476-91. doi: 10.1038/ismej.2014.1. Epub 2014 Jan 30.

42.

Unexpected evolutionary proximity of eukaryotic and cyanobacterial enzymes responsible for biosynthesis of retinoic acid and its oxidation.

Millard A, Scanlan DJ, Gallagher C, Marsh A, Taylor PC.

Mol Biosyst. 2014 Mar 4;10(3):380-3. doi: 10.1039/c3mb70447e. Epub 2014 Jan 13.

PMID:
24413378
43.

In situ interactions between photosynthetic picoeukaryotes and bacterioplankton in the Atlantic Ocean: evidence for mixotrophy.

Hartmann M, Zubkov MV, Scanlan DJ, Lepère C.

Environ Microbiol Rep. 2013 Dec;5(6):835-40. doi: 10.1111/1758-2229.12084. Epub 2013 Jul 22.

PMID:
24249292
44.

Elemental composition of natural populations of key microbial groups in Atlantic waters.

Grob C, Ostrowski M, Holland RJ, Heldal M, Norland S, Erichsen ES, Blindauer C, Martin AP, Zubkov MV, Scanlan DJ.

Environ Microbiol. 2013 Nov;15(11):3054-64. doi: 10.1111/1462-2920.12145. Epub 2013 May 13.

PMID:
23663455
45.

Insights into the physiology and ecology of the brackish-water-adapted Cyanobacterium Nodularia spumigena CCY9414 based on a genome-transcriptome analysis.

Voss B, Bolhuis H, Fewer DP, Kopf M, Möke F, Haas F, El-Shehawy R, Hayes P, Bergman B, Sivonen K, Dittmann E, Scanlan DJ, Hagemann M, Stal LJ, Hess WR.

PLoS One. 2013;8(3):e60224. doi: 10.1371/journal.pone.0060224. Epub 2013 Mar 28.

46.

A global perspective on marine photosynthetic picoeukaryote community structure.

Kirkham AR, Lepère C, Jardillier LE, Not F, Bouman H, Mead A, Scanlan DJ.

ISME J. 2013 May;7(5):922-36. doi: 10.1038/ismej.2012.166. Epub 2013 Jan 31.

47.

Comparable light stimulation of organic nutrient uptake by SAR11 and Prochlorococcus in the North Atlantic subtropical gyre.

Gómez-Pereira PR, Hartmann M, Grob C, Tarran GA, Martin AP, Fuchs BM, Scanlan DJ, Zubkov MV.

ISME J. 2013 Mar;7(3):603-14. doi: 10.1038/ismej.2012.126. Epub 2012 Oct 25.

48.

Mining genomes of marine cyanobacteria for elements of zinc homeostasis.

Barnett JP, Millard A, Ksibe AZ, Scanlan DJ, Schmid R, Blindauer CA.

Front Microbiol. 2012 Apr 11;3:142. doi: 10.3389/fmicb.2012.00142. eCollection 2012.

49.

Mixotrophic basis of Atlantic oligotrophic ecosystems.

Hartmann M, Grob C, Tarran GA, Martin AP, Burkill PH, Scanlan DJ, Zubkov MV.

Proc Natl Acad Sci U S A. 2012 Apr 10;109(15):5756-60. doi: 10.1073/pnas.1118179109. Epub 2012 Mar 26.

50.

Protein fractionation and detection for metalloproteomics: challenges and approaches.

Barnett JP, Scanlan DJ, Blindauer CA.

Anal Bioanal Chem. 2012 Apr;402(10):3311-22. doi: 10.1007/s00216-012-5743-y. Review.

PMID:
22302168

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